myRT

myRT report for GCA_010672185.1_ASM1067218v1

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Seq: JAAHHL010001119.1 Symploca sp. SIO3E6 3E6_NODE_1119, whole genome shotgun sequence (2901 bp)
Overview 1 RT 1: 2-2805 bp Neighborhood of RT #1 [2, 2828] RVT_N RVT-GII McrA PsaA Feature: gene Location: 2-433 bp Feature: gene Location: 936-2441 bp Feature: RT Description: RVT_N Location: 972-1212 bp Feature: RT Description: RVT_N Location: 972-1 21 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1269-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 269-1 863 bp Feature: domain Description: McrA Location: 2097-2418 bp Feature: domain Description: McrA Location: 2097-241 8 bp Feature: gene Location: 2568-2828 bp Feature: domain Description: PsaA Location: 2571-2805 bp Feature: domain Description: PsaA Location: 2571 -2805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PsaA (cd01137), RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHL010000121.1 Symploca sp. SIO3E6 3E6_NODE_121, whole genome shotgun sequence (11592 bp)
Overview 1 RT 1: 1489-10029 bp Neighborhood of RT #1 [1489, 10055] InsQ RAYT RVT_N RVT-GII RVT_N RVT-GII GIIM HNHc RVT-GII GIIM HNHc arc_metj PLN02823 Feature: gene Location: 1489-2706 bp Feature: domain Description: InsQ Location: 1525-2671 bp Feature: domain Description: InsQ Location: 152 5-2 671 bp Feature: gene Location: 2757-2927 bp Feature: domain Description: RAYT Location: 2766-2925 bp Feature: domain Description: RAYT Location: 2 766-2 92 5 bp Feature: gene Location: 4190-5068 bp Feature: RT Description: RVT_N Location: 4235-4478 bp Feature: RT Description: RVT_N Location: 42 35-4478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4523-5057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 3-5057 bp Feature: gene Location: 5474-5608 bp Feature: gene Location: 5685-7355 bp Feature: RT Description: RVT_N Location: 5733-5979 bp Feature: RT Description: RVT_N Location: 5733-5979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6027-6666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602 7-6666 bp Feature: domain Description: GIIM Note: maturase Location: 6738-6972 bp Feature: domain Description: GIIM Note: maturase Location: 6738-6972 bp Feature: domain Description: HNHc Note: nucleases Location: 7179-7341 bp Feature: domain Description: HNHc Note: nucleases Location: 7179-7341 bp Feature: gene Location: 7462-8358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7468-7606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7468-7606 bp Feature: domain Description: GIIM Note: maturase Location: 7711-7942 bp Feature: domain Description: GIIM Note: maturase Location: 7711-7942 bp Feature: domain Description: HNHc Note: nucleases Location: 8140-8293 bp Feature: domain Description: HNHc Note: nucleases Location: 8140-82 93 bp Feature: gene Location: 8717-8893 bp Feature: domain Description: arc_metj Location: 8765-8876 bp Feature: domain Description: arc_metj Location: 8765-8876 bp Feature: gene Location: 9018-10055 bp Feature: domain Description: PLN02823 Location: 9126-10029 bp Feature: domain Description: PLN02 82 3 Location: 912 6-1002 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RAYT (COG1943), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), arc_metj (LOAD_arc_metj), PLN02823 (spermine synthase)

Seq: JAAHHL010001244.1 Symploca sp. SIO3E6 3E6_NODE_1244, whole genome shotgun sequence (2561 bp)
Overview 1 RT 1: 169-2488 bp Neighborhood of RT #1 [169, 2541] 7tmA_PGD2 RVT_N RVT-GII GIIM Feature: gene Location: 169-576 bp Feature: domain Description: 7tmA_PGD2 Location: 298-490 bp Feature: domain Description: 7tmA_PGD2 Location: 298-490 bp Feature: gene Location: 839-1003 bp Feature: gene Location: 1183-2541 bp Feature: RT Description: RVT_N Location: 1201-1444 bp Feature: RT Description: RVT_N Location: 1201-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489-2140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489-2140 bp Feature: domain Description: GIIM Note: maturase Location: 2239-2488 bp Feature: domain Description: GIIM Note: maturase Location: 223 9-2488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), 7tmA_PGD2 (cd15140)

Seq: JAAHHL010001820.1 Symploca sp. SIO3E6 3E6_NODE_1820, whole genome shotgun sequence (1159 bp)
Overview 1 RT 1: 105-1080 bp Neighborhood of RT #1 [105, 1157] RVT-GII GIIM McrA Feature: gene Location: 105-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-390 bp Feature: domain Description: GIIM Note: maturase Location: 489-720 bp Feature: domain Description: GIIM Note: maturase Location: 4 89-720 bp Feature: domain Description: McrA Location: 810-1080 bp Feature: domain Description: McrA Location: 810-1080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHL010001863.1 Symploca sp. SIO3E6 3E6_NODE_1863, whole genome shotgun sequence (1052 bp)
Overview 1 RT 1: 61-1021 bp Neighborhood of RT #1 [61, 1050] RVT-GII McrA Feature: gene Location: 61-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-466 bp Feature: domain Description: McrA Location: 697-1021 bp Feature: domain Description: McrA Location: 697-1021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058)

Seq: JAAHHL010000026.1 Symploca sp. SIO3E6 3E6_NODE_26, whole genome shotgun sequence (19077 bp)
Overview 1 RT 1: 1-3291 bp Neighborhood of RT #1 [1, 3350] hopene_cyclase RVT-GII Collagen Feature: gene Location: 1-1251 bp Feature: domain Description: hopene_cyclase Location: 7-1246 bp Feature: domain Description: hopene_cyclase Location: 7-1246 bp Feature: gene Location: 2256-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2259-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2259-2412 bp Feature: gene Location: 2755-2898 bp Feature: gene Location: 3009-3350 bp Feature: domain Description: Collagen Location: 3156-3291 bp Feature: domain Description: Collagen Location: 3156 -3291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hopene_cyclase (TIGR01507), RVT-GII, Collagen (pfam01391)

Seq: JAAHHL010000273.1 Symploca sp. SIO3E6 3E6_NODE_273, whole genome shotgun sequence (7972 bp)
Overview 1 RT 1: 1019-6230 bp Neighborhood of RT #1 [1019, 6253] InsQ RVT_N RVT-GII GIIM McrA fatty_acyltransferase_like Feature: gene Location: 1019-2098 bp Feature: domain Description: InsQ Location: 1022-1937 bp Feature: domain Description: InsQ Location: 1022-1937 bp Feature: gene Location: 2440-2676 bp Feature: gene Location: 2858-4672 bp Feature: RT Description: RVT_N Location: 2891-3134 bp Feature: RT Description: RVT_N Location: 2891-3134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3179-3875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317 9-387 5 bp Feature: domain Description: GIIM Note: maturase Location: 3974-4205 bp Feature: domain Description: GIIM Note: maturase Location: 397 4-4205 bp Feature: domain Description: McrA Location: 4298-4565 bp Feature: domain Description: McrA Location: 4298-4565 bp Feature: gene Location: 4871-5053 bp Feature: gene Location: 5234-6253 bp Feature: domain Description: fatty_acyltransferase_like Location: 5402-6230 bp Feature: domain Description: fatty_acyltransferase_like Location: 5402-6230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), fatty_acyltransferase_like (cd01846)

Seq: JAAHHL010000302.1 Symploca sp. SIO3E6 3E6_NODE_302, whole genome shotgun sequence (7600 bp)
Overview 1 RT 1: 318-7307 bp Neighborhood of RT #1 [318, 7327] KOG1552 XisI RVT_N RVT-GII GIIM HNHc SH3_16 NLPC_P60 PenP Feature: gene Location: 318-1436 bp Feature: domain Description: KOG1552 Location: 741-1371 bp Feature: domain Description: KOG1552 Location: 741-1371 bp Feature: gene Location: 1649-2044 bp Feature: domain Description: XisI Location: 1712-2036 bp Feature: domain Description: XisI Location: 1712-2036 bp Feature: gene Location: 2203-3957 bp Feature: RT Description: RVT_N Location: 2251-2494 bp Feature: RT Description: RVT_N Location: 2251-2494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-3184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2545-318 4 bp Feature: domain Description: GIIM Note: maturase Location: 3259-3490 bp Feature: domain Description: GIIM Note: maturase Location: 3259-3490 bp Feature: domain Description: HNHc Note: nucleases Location: 3700-3853 bp Feature: domain Description: HNHc Note: nucleases Location: 3700-38 53 bp Feature: gene Location: 5089-5778 bp Feature: domain Description: SH3_16 Location: 5155-5302 bp Feature: domain Description: SH3_16 Location: 5155-5302 bp Feature: domain Description: NLPC_P60 Location: 5422-5671 bp Feature: domain Description: NLPC_P60 Location: 5422-5671 bp Feature: gene Location: 6152-7327 bp Feature: domain Description: PenP Location: 6533-7307 bp Feature: domain Description: PenP Location: 6533-7307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisI (pfam08869), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), KOG1552 (KOG1552, Predicted alpha/beta hydrolase ), PenP (COG2367)

Seq: JAAHHL010000038.1 Symploca sp. SIO3E6 3E6_NODE_38, whole genome shotgun sequence (25469 bp)
Overview 1 RT 1: 3620-9292 bp Neighborhood of RT #1 [3620, 9292] pfam13191 RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 3620-3787 bp Feature: gene Location: 4135-5385 bp Feature: domain Description: pfam13191 Location: 4180-4576 bp Feature: domain Description: pfam1319 1 Location: 4180-4576 bp Feature: gene Location: 5529-7250 bp Feature: RT Description: RVT_N Location: 5565-5811 bp Feature: RT Description: RVT_N Location: 5565-5811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5853-6537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5853-6537 bp Feature: domain Description: GIIM Note: maturase Location: 6636-6867 bp Feature: domain Description: GIIM Note: maturase Location: 6636-6867 bp Feature: domain Description: McrA Location: 6960-7227 bp Feature: domain Description: McrA Location: 69 60-7227 bp Feature: gene Location: 7872-9077 bp Feature: domain Description: InsQ Location: 7878-8997 bp Feature: domain Description: InsQ Location: 7878-89 9 7 bp Feature: gene Location: 9146-9292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam13191 (AAA_16;AAA ATPase domain), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: JAAHHL010000390.1 Symploca sp. SIO3E6 3E6_NODE_390, whole genome shotgun sequence (6701 bp)
Overview 1 RT 1: 1814-6422 bp Neighborhood of RT #1 [1814, 6538] UPF0227 RVT_N RVT-GII McrA MnuA_DNase1-like Pentapeptide Feature: gene Location: 1814-2449 bp Feature: domain Description: UPF0227 Location: 1823-2429 bp Feature: domain Description: UPF0227 Location: 1823-2429 bp Feature: gene Location: 2607-2888 bp Feature: gene Location: 3055-4560 bp Feature: RT Description: RVT_N Location: 3091-3334 bp Feature: RT Description: RVT_N Location: 3091-3334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3388-3982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3388-3982 bp Feature: domain Description: McrA Location: 4216-4537 bp Feature: domain Description: McrA Location: 4216-4537 bp Feature: gene Location: 5035-6069 bp Feature: domain Description: MnuA_DNase1-like Location: 5059-6034 bp Feature: domain Description: MnuA_DNase1-like Location: 5059-6034 bp Feature: gene Location: 6299-6538 bp Feature: domain Description: Pentapeptide Location: 6311-6422 bp Feature: domain Description: Pentapeptide Location: 6311-6422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), RVT_N (pfam13655), RVT-GII, McrA (COG4058), MnuA_DNase1-like (cd10283), Pentapeptide (pfam00805)

Seq: JAAHHL010000510.1 Symploca sp. SIO3E6 3E6_NODE_510, whole genome shotgun sequence (5765 bp)
Overview 1 RT 1: 89-2992 bp Neighborhood of RT #1 [89, 2992] RVT_N RVT-GII GIIM McrA Feature: gene Location: 89-1618 bp Feature: RT Description: RVT_N Location: 116-362 bp Feature: RT Description: RVT_N Location: 11 6-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1256 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1256 bp Feature: domain Description: McrA Location: 1271-1571 bp Feature: domain Description: McrA Location: 1271-1571 bp Feature: gene Location: 1995-2417 bp Feature: gene Location: 2537-2992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHL010000659.1 Symploca sp. SIO3E6 3E6_NODE_659, whole genome shotgun sequence (4754 bp)
Overview 1 RT 1: 247-4505 bp Neighborhood of RT #1 [247, 4505] LPG_synthase_TM GIIM HNHc RVT_N RVT-GII Feature: gene Location: 247-1182 bp Feature: domain Description: LPG_synthase_TM Location: 262-1102 bp Feature: domain Description: LPG_synthase_TM Location: 262-1102 bp Feature: gene Location: 1436-2140 bp Feature: domain Description: GIIM Note: maturase Location: 1439-1673 bp Feature: domain Description: GIIM Note: maturase Location: 1439-1673 bp Feature: domain Description: HNHc Note: nucleases Location: 1883-2036 bp Feature: domain Description: HNHc Note: nucleases Location: 1883-2036 bp Feature: gene Location: 2148-3191 bp Feature: RT Description: RVT_N Location: 2196-2442 bp Feature: RT Description: RVT_N Location: 2196-2442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2490-3129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2490-312 9 bp Feature: gene Location: 3277-3531 bp Feature: gene Location: 4371-4505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), RVT-GII, LPG_synthase_TM (pfam03706)