myRT

myRT report for GCA_010672195.1_ASM1067219v1

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Seq: JAAHHK010001130.1 Moorea sp. SIO3E2 3E2_NODE_1130, whole genome shotgun sequence (2211 bp)
Overview 1 RT 1: 92-1751 bp Neighborhood of RT #1 [92, 1751] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 92-1600 bp Feature: domain Description: RVT_N Location: 116-362 bp Feature: domain Description: RVT_N Location: 1 1 6-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 3-836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1 007 bp Feature: domain Description: GIIM Note: maturase Location: 1064-1226 bp Feature: domain Description: GIIM Note: maturase Location: 1 064-1 226 bp Feature: domain Description: McrA Location: 1241-1562 bp Feature: domain Description: McrA Location: 1 241 -1 562 bp Feature: gene Location: 1611-1751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010001181.1 Moorea sp. SIO3E2 3E2_NODE_1181, whole genome shotgun sequence (2153 bp)
Overview 1 RT 1: 22-1537 bp Neighborhood of RT #1 [22, 1581] RVT_N RVT-GII GIIM HNH Feature: gene Location: 22-1581 bp Feature: domain Description: RVT_N Location: 25-154 bp Feature: domain Description: RVT_N Location: 2 5-154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-847 bp Feature: domain Description: GIIM Note: maturase Location: 934-1159 bp Feature: domain Description: GIIM Note: maturase Location: 934-1159 bp Feature: domain Description: HNH Note: nucleases Location: 1405-1537 bp Feature: domain Description: HNH Note: nucleases Location: 1405-1537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHK010001226.1 Moorea sp. SIO3E2 3E2_NODE_1226, whole genome shotgun sequence (2104 bp)
Overview 1 RT 1: 640-2025 bp Neighborhood of RT #1 [640, 2066] RVT-GII GIIM McrA Feature: gene Location: 640-951 bp Feature: gene Location: 1212-2066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-13 3 2 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1644 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1644 bp Feature: domain Description: McrA Location: 1725-2025 bp Feature: domain Description: McrA Location: 1725-2025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010001278.1 Moorea sp. SIO3E2 3E2_NODE_1278, whole genome shotgun sequence (2045 bp)
Overview 1 RT 1: 2-1935 bp Neighborhood of RT #1 [2, 2042] RVT_N RVT-GII Feature: gene Location: 2-418 bp Feature: gene Location: 1185-2042 bp Feature: domain Description: RVT_N Location: 1212-1458 bp Feature: domain Description: RVT_N Location: 1212-14 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509-1935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHK010001311.1 Moorea sp. SIO3E2 3E2_NODE_1311, whole genome shotgun sequence (2014 bp)
Overview 1 RT 1: 84-1557 bp Neighborhood of RT #1 [84, 1592] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 84-1592 bp Feature: domain Description: RVT_N Location: 108-354 bp Feature: domain Description: RVT_N Location: 108-35 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405 -828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-999 bp Feature: domain Description: GIIM Note: maturase Location: 1056-1236 bp Feature: domain Description: GIIM Note: maturase Location: 105 6-1236 bp Feature: domain Description: McrA Location: 1248-1557 bp Feature: domain Description: McrA Location: 1248-15 5 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010001442.1 Moorea sp. SIO3E2 3E2_NODE_1442, whole genome shotgun sequence (1864 bp)
Overview 1 RT 1: 46-1261 bp Neighborhood of RT #1 [46, 1350] RVT_N RVT-GII GIIM Feature: gene Location: 46-1350 bp Feature: domain Description: RVT_N Location: 91-337 bp Feature: domain Description: RVT_N Location: 91-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1030 bp Feature: domain Description: GIIM Note: maturase Location: 1117-1261 bp Feature: domain Description: GIIM Note: maturase Location: 1117-126 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHK010001541.1 Moorea sp. SIO3E2 3E2_NODE_1541, whole genome shotgun sequence (1758 bp)
Overview 1 RT 1: 3-1669 bp Neighborhood of RT #1 [3, 1719] RVT-GII GIIM McrA DUF1460 Feature: gene Location: 3-857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-264 bp Feature: domain Description: GIIM Note: maturase Location: 324-465 bp Feature: domain Description: GIIM Note: maturase Location: 324-465 bp Feature: domain Description: McrA Location: 582-819 bp Feature: domain Description: McrA Location: 582-819 bp Feature: gene Location: 1168-1719 bp Feature: domain Description: DUF1460 Location: 1477-1669 bp Feature: domain Description: DUF1460 Location: 147 7 -1669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF1460 (pfam07313)

Seq: JAAHHK010001739.1 Moorea sp. SIO3E2 3E2_NODE_1739, whole genome shotgun sequence (1570 bp)
Overview 1 RT 1: 171-1510 bp Neighborhood of RT #1 [171, 1569] RVT-GII RVT-GII GIIM McrA Feature: gene Location: 171-422 bp Feature: gene Location: 673-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-916 bp Feature: domain Description: GIIM Note: maturase Location: 973-1099 bp Feature: domain Description: GIIM Note: maturase Location: 973-1099 bp Feature: domain Description: McrA Location: 1231-1510 bp Feature: domain Description: McrA Location: 1231-1510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010001796.1 Moorea sp. SIO3E2 3E2_NODE_1796, whole genome shotgun sequence (1513 bp)
Overview 1 RT 1: 1-991 bp Neighborhood of RT #1 [1, 1134] RVT_N RVT-GII Feature: gene Location: 1-1134 bp Feature: domain Description: RVT_N Location: 43-289 bp Feature: domain Description: RVT_N Location: 43-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-9 9 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHK010001894.1 Moorea sp. SIO3E2 3E2_NODE_1894, whole genome shotgun sequence (1417 bp)
Overview 1 RT 1: 3-1035 bp Neighborhood of RT #1 [3, 1034] RVT_N RVT-GII GIIM Feature: gene Location: 3-1034 bp Feature: domain Description: RVT_N Location: 6-135 bp Feature: domain Description: RVT_N Location: 6-135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177-828 bp Feature: domain Description: GIIM Note: maturase Location: 918-1035 bp Feature: domain Description: GIIM Note: maturase Location: 918-10 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHK010002062.1 Moorea sp. SIO3E2 3E2_NODE_2062, whole genome shotgun sequence (1290 bp)
Overview 1 RT 1: 268-1258 bp Neighborhood of RT #1 [268, 1287] RVT-GII GIIM McrA Feature: gene Location: 268-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-703 bp Feature: domain Description: GIIM Note: maturase Location: 760-910 bp Feature: domain Description: GIIM Note: maturase Location: 760-910 bp Feature: domain Description: McrA Location: 946-1258 bp Feature: domain Description: McrA Location: 946-1258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010002400.1 Moorea sp. SIO3E2 3E2_NODE_2400, whole genome shotgun sequence (1038 bp)
Overview 1 RT 1: 237-792 bp Neighborhood of RT #1 [237, 1037] RVT-Retrons Feature: gene Location: 237-1037 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 240-792 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 240-792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAHHK010000264.1 Moorea sp. SIO3E2 3E2_NODE_264, whole genome shotgun sequence (4335 bp)
Overview 1 RT 1: 43-3663 bp Neighborhood of RT #1 [43, 3698] RVT_N RVT-GII RVT-GII GIIM COG1787 Feature: gene Location: 43-1320 bp Feature: domain Description: RVT_N Location: 70-316 bp Feature: domain Description: RVT_N Location: 70-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-967 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1231 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1231 bp Feature: gene Location: 1809-2045 bp Feature: gene Location: 2784-3698 bp Feature: domain Description: COG1787 Location: 3309-3663 bp Feature: domain Description: COG1787 Location: 3309-3663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG1787 (Endonuclease, HJR/Mrr/RecB family )

Seq: JAAHHK010000265.1 Moorea sp. SIO3E2 3E2_NODE_265, whole genome shotgun sequence (4333 bp)
Overview 1 RT 1: 2-3596 bp Neighborhood of RT #1 [2, 3596] InsQ RVT-GII GIIM McrA RVT_N Feature: gene Location: 2-997 bp Feature: domain Description: InsQ Location: 134-998 bp Feature: domain Description: InsQ Location: 134-998 bp Feature: gene Location: 1132-2298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1138-1702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1138-1702 bp Feature: domain Description: GIIM Note: maturase Location: 1759-1939 bp Feature: domain Description: GIIM Note: maturase Location: 1759-1939 bp Feature: domain Description: McrA Location: 1948-2257 bp Feature: domain Description: McrA Location: 1948-2257 bp Feature: gene Location: 2394-2819 bp Feature: domain Description: RVT_N Location: 2487-2733 bp Feature: domain Description: RVT_N Location: 2487-2733 bp Feature: gene Location: 3456-3596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHK010000424.1 Moorea sp. SIO3E2 3E2_NODE_424, whole genome shotgun sequence (3654 bp)
Overview 1 RT 1: 52-2361 bp Neighborhood of RT #1 [52, 2361] RVT-GII GIIM McrA DUF1350 Feature: gene Location: 52-801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58-199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58-199 bp Feature: domain Description: GIIM Note: maturase Location: 256-433 bp Feature: domain Description: GIIM Note: maturase Location: 256-433 bp Feature: domain Description: McrA Location: 457-757 bp Feature: domain Description: McrA Location: 457-757 bp Feature: gene Location: 1044-1817 bp Feature: domain Description: DUF1350 Location: 1050-1803 bp Feature: domain Description: DUF1350 Location: 1050-1803 bp Feature: gene Location: 1921-2361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF1350 (pfam07082)

Seq: JAAHHK010000535.1 Moorea sp. SIO3E2 3E2_NODE_535, whole genome shotgun sequence (3312 bp)
Overview 1 RT 1: 3-3074 bp Neighborhood of RT #1 [3, 3085] YfdV Haem_oxygenas_2 RVT-UG4 Feature: gene Location: 3-1148 bp Feature: domain Description: YfdV Location: 12-792 bp Feature: domain Description: YfdV Location: 12-792 bp Feature: gene Location: 1154-2089 bp Feature: domain Description: Haem_oxygenas_2 Location: 1472-2015 bp Feature: domain Description: Haem_oxygenas_2 Location: 1472-2015 bp Feature: gene Location: 2840-3085 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2843-3074 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2843-3074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfdV (COG0679), Haem_oxygenas_2 (pfam14518), RVT-UG4

Seq: JAAHHK010000640.1 Moorea sp. SIO3E2 3E2_NODE_640, whole genome shotgun sequence (3050 bp)
Overview 1 RT 1: 1-2934 bp Neighborhood of RT #1 [1, 2957] RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 1-702 bp Feature: domain Description: RVT_N Location: 46-292 bp Feature: domain Description: RVT_N Location: 46-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-697 bp Feature: gene Location: 1436-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1442-1580 bp Feature: domain Description: GIIM Note: maturase Location: 1640-1781 bp Feature: domain Description: GIIM Note: maturase Location: 1640-17 81 bp Feature: domain Description: McrA Location: 1826-2132 bp Feature: domain Description: McrA Location: 1826-2132 bp Feature: gene Location: 2220-2957 bp Feature: domain Description: RVT_N Location: 2256-2502 bp Feature: domain Description: RVT_N Location: 2256-2502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2553-2934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2553-2934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHK010000067.1 Moorea sp. SIO3E2 3E2_NODE_67, whole genome shotgun sequence (7019 bp)
Overview 1 RT 1: 2084-7018 bp Neighborhood of RT #1 [2084, 7017] Peptidases_S8_10 InsQ RVT_N RVT-GII RVT-GII Feature: gene Location: 2084-3541 bp Feature: domain Description: Peptidases_S8_10 Location: 2543-3428 bp Feature: domain Description: Peptidases_S8_10 Location: 2543-3428 bp Feature: gene Location: 3895-5289 bp Feature: domain Description: InsQ Location: 4531-5221 bp Feature: domain Description: InsQ Location: 4531-5221 bp Feature: gene Location: 5941-6393 bp Feature: domain Description: RVT_N Location: 5986-6232 bp Feature: domain Description: RVT_N Location: 5986-6232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6274-6376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6274-6376 bp Feature: gene Location: 6439-7017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6481-7018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6481-7018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_10 (cd07494), InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHK010000073.1 Moorea sp. SIO3E2 3E2_NODE_73, whole genome shotgun sequence (6796 bp)
Overview 1 RT 1: 109-6790 bp Neighborhood of RT #1 [109, 6795] RVT_N RVT-GII GIIM McrA GAF PRK11091 TMAO_torS PAS BaeS pleD PRK10060 Feature: gene Location: 109-1809 bp Feature: domain Description: RVT_N Location: 145-391 bp Feature: domain Description: RVT_N Location: 145-391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1192-1420 bp Feature: domain Description: GIIM Note: maturase Location: 119 2-1420 bp Feature: domain Description: McrA Location: 1501-1768 bp Feature: domain Description: McrA Location: 1501-1768 bp Feature: gene Location: 2936-5206 bp Feature: domain Description: GAF Location: 3068-3497 bp Feature: domain Description: GAF Location: 3068-3497 bp Feature: domain Description: PRK11091 Location: 3506-3854 bp Feature: domain Description: PRK11091 Location: 3506-3854 bp Feature: domain Description: TMAO_torS Location: 3905-4043 bp Feature: domain Description: TMAO_torS Location: 3905-4043 bp Feature: domain Description: PAS Location: 4058-4364 bp Feature: domain Description: PAS Location: 4058-4364 bp Feature: domain Description: BaeS Location: 4385-5189 bp Feature: domain Description: BaeS Location: 4385-5189 bp Feature: gene Location: 5209-6795 bp Feature: domain Description: pleD Location: 5218-5575 bp Feature: domain Description: pleD Location: 5218-5575 bp Feature: domain Description: PRK10060 Location: 5602-6790 bp Feature: domain Description: PRK10060 Location: 5602-6790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GAF (smart00065), PRK11091 (aerobic respiration control sensor protein ArcB; Provisional), TMAO_torS (TIGR02956), PAS (smart00091), BaeS (COG0642), pleD (PRK09581)
PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: JAAHHK010000096.1 Moorea sp. SIO3E2 3E2_NODE_96, whole genome shotgun sequence (6102 bp)
Overview 1 RT 1: 500-6100 bp Neighborhood of RT #1 [500, 6100] DDE_Tnp_ISAZ013 RVT_N RVT-GII RVT-GII GIIM McrA HTH_OrfB_IS605 InsQ Feature: gene Location: 500-1729 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 794-1715 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 794-1715 bp Feature: gene Location: 1731-1991 bp Feature: gene Location: 2381-3892 bp Feature: domain Description: RVT_N Location: 2417-2660 bp Feature: domain Description: RVT_N Location: 2417-2660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2714-3140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2714-3140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3143-3308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3143-3308 bp Feature: domain Description: GIIM Note: maturase Location: 3365-3518 bp Feature: domain Description: GIIM Note: maturase Location: 3365-3518 bp Feature: domain Description: McrA Location: 3545-3863 bp Feature: domain Description: McrA Location: 3545-3863 bp Feature: gene Location: 4432-5889 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4909-5008 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4909-5008 bp Feature: domain Description: InsQ Location: 5083-5854 bp Feature: domain Description: InsQ Location: 5083-5854 bp Feature: gene Location: 5963-6100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HTH_OrfB_IS605 (pfam12323), InsQ (COG0675)