myRT

myRT report for GCA_010672205.1_ASM1067220v1

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Seq: JAAHHD010000011.1 Moorea sp. SIO3A5 3A5_NODE_11, whole genome shotgun sequence (747870 bp)
Overview 1 RT 1: 495419-503681 bp Neighborhood of RT #1 [495419, 503806] Uma2 RVT_N RVT-GII GIIM HNHc Peptidase_C14 pfam13191 WD40 KOG0263 WD40 Feature: gene Location: 495419-495547 bp Feature: gene Location: 495554-496042 bp Feature: domain Description: Uma2 Location: 495578-496040 bp Feature: domain Description: Uma2 Location: 495578-496040 bp Feature: gene Location: 496658-498505 bp Feature: domain Description: RVT_N Location: 496721-496967 bp Feature: domain Description: RVT_N Location: 496721 -496967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497015-497687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49701 5-497687 bp Feature: domain Description: GIIM Note: maturase Location: 497762-497993 bp Feature: domain Description: GIIM Note: maturase Location: 497762-497993 bp Feature: domain Description: HNHc Note: nucleases Location: 498212-498374 bp Feature: domain Description: HNHc Note: nucleases Location: 49821 2-498374 bp Feature: gene Location: 498508-498789 bp Feature: gene Location: 499391-503806 bp Feature: domain Description: Peptidase_C14 Location: 499409-500021 bp Feature: domain Description: Peptidase_C1 4 Location: 499409-500021 bp Feature: domain Description: pfam13191 Location: 500306-500540 bp Feature: domain Description: pfam1 31 91 Location: 500306-500540 bp Feature: domain Description: WD40 Location: 501974-502742 bp Feature: domain Description: WD40 Location: 501 974-502742 bp Feature: domain Description: KOG0263 Location: 502775-503003 bp Feature: domain Description: KOG0263 Location: 502775-503003 bp Feature: domain Description: WD40 Location: 503024-503681 bp Feature: domain Description: WD40 Location: 503024-503681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Peptidase_C14 (pfam00656), pfam13191 (AAA_16;AAA ATPase domain), WD40 (smart00320), KOG0263 (KOG0263, Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) )

Seq: JAAHHD010000130.1 Moorea sp. SIO3A5 3A5_NODE_130, whole genome shotgun sequence (2664 bp)
Overview 1 RT 1: 114-2403 bp Neighborhood of RT #1 [114, 2403] RVT_N RVT-GII GIIM McrA Feature: gene Location: 114-1811 bp Feature: domain Description: RVT_N Location: 159-405 bp Feature: domain Description: RVT_N Location: 159-405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1410 bp Feature: domain Description: McrA Location: 1488-1761 bp Feature: domain Description: McrA Location: 1488-1761 bp Feature: gene Location: 2251-2403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHD010000135.1 Moorea sp. SIO3A5 3A5_NODE_135, whole genome shotgun sequence (2198 bp)
Overview 1 RT 1: 270-2082 bp Neighborhood of RT #1 [270, 2120] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 270-422 bp Feature: gene Location: 612-2120 bp Feature: domain Description: RVT_N Location: 636-882 bp Feature: domain Description: RVT_N Location: 63 6-882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 3 -13 56 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359-1527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 59-1527 bp Feature: domain Description: GIIM Note: maturase Location: 1584-1746 bp Feature: domain Description: GIIM Note: maturase Location: 1584-1746 bp Feature: domain Description: McrA Location: 1761-2082 bp Feature: domain Description: McrA Location: 1761-2082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHD010000136.1 Moorea sp. SIO3A5 3A5_NODE_136, whole genome shotgun sequence (2182 bp)
Overview 1 RT 1: 578-2051 bp Neighborhood of RT #1 [578, 2089] RVT_N RVT-GII GIIM McrA Feature: gene Location: 578-2089 bp Feature: domain Description: RVT_N Location: 602-848 bp Feature: domain Description: RVT_N Location: 602-84 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899-14 93 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1691 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1691 bp Feature: domain Description: McrA Location: 1766-2051 bp Feature: domain Description: McrA Location: 1766-2051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHD010000137.1 Moorea sp. SIO3A5 3A5_NODE_137, whole genome shotgun sequence (2154 bp)
Overview 1 RT 1: 79-1561 bp Neighborhood of RT #1 [79, 1590] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 79-1590 bp Feature: domain Description: RVT_N Location: 115-358 bp Feature: domain Description: RVT_N Location: 115 -35 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841-1006 bp Feature: domain Description: GIIM Note: maturase Location: 1063-1216 bp Feature: domain Description: GIIM Note: maturase Location: 1063-1216 bp Feature: domain Description: McrA Location: 1243-1561 bp Feature: domain Description: McrA Location: 1243-15 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHD010000140.1 Moorea sp. SIO3A5 3A5_NODE_140, whole genome shotgun sequence (2014 bp)
Overview 1 RT 1: 84-1557 bp Neighborhood of RT #1 [84, 1592] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 84-1592 bp Feature: domain Description: RVT_N Location: 108-354 bp Feature: domain Description: RVT_N Location: 108-354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-999 bp Feature: domain Description: GIIM Note: maturase Location: 1056-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1056 -1236 bp Feature: domain Description: McrA Location: 1248-1557 bp Feature: domain Description: McrA Location: 1248-1557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHD010000018.1 Moorea sp. SIO3A5 3A5_NODE_18, whole genome shotgun sequence (164252 bp)
Overview 1 RT 1: 18409-21534 bp Neighborhood of RT #1 [18409, 21534] InsQ HNH RVT_N RVT-GII GIIM Feature: gene Location: 18409-18711 bp Feature: domain Description: InsQ Location: 18415-18676 bp Feature: domain Description: InsQ Location: 18415-1867 6 bp Feature: gene Location: 18885-19025 bp Feature: domain Description: HNH Note: nucleases Location: 18891-18981 bp Feature: domain Description: HNH Note: nucleases Location: 18891-18981 bp Feature: gene Location: 19152-20513 bp Feature: domain Description: RVT_N Location: 19155-19284 bp Feature: domain Description: RVT_N Location: 19155-19284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19326-19977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19326-1997 7 bp Feature: domain Description: GIIM Note: maturase Location: 20067-20289 bp Feature: domain Description: GIIM Note: maturase Location: 20067 -20289 bp Feature: gene Location: 20988-21125 bp Feature: gene Location: 21274-21534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), HNH (pfam01844), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHD010000019.1 Moorea sp. SIO3A5 3A5_NODE_19, whole genome shotgun sequence (159962 bp)
Overview 1 RT 1: 10060-14072 bp Neighborhood of RT #1 [10060, 14072] YfmG Avd_like RVT-DGRs StbD Feature: gene Location: 10060-11346 bp Feature: domain Description: YfmG Location: 10639-11341 bp Feature: domain Description: YfmG Location: 10639-11341 bp Feature: gene Location: 11444-11791 bp Feature: domain Description: Avd_like Location: 11462-11768 bp Feature: domain Description: Avd_like Location: 11462-11768 bp Feature: gene Location: 11788-12846 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11992-12640 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11992-12640 bp Feature: gene Location: 13344-13616 bp Feature: domain Description: StbD Location: 13347-13545 bp Feature: domain Description: StbD Location: 13347-13545 bp Feature: gene Location: 13923-14072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, StbD (COG2161)

Seq: JAAHHD010000021.1 Moorea sp. SIO3A5 3A5_NODE_21, whole genome shotgun sequence (136817 bp)
Overview 1 RT 1: 131714-136691 bp Neighborhood of RT #1 [131714, 136693] RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM Feature: gene Location: 131714-132364 bp Feature: gene Location: 132715-132867 bp Feature: gene Location: 133434-134963 bp Feature: domain Description: RVT_N Location: 133476-133722 bp Feature: domain Description: RVT_N Location: 133476-133722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133764-134424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133764-134424 bp Feature: domain Description: GIIM Note: maturase Location: 134502-134736 bp Feature: domain Description: GIIM Note: maturase Location: 134502-134736 bp Feature: gene Location: 135238-135378 bp Feature: gene Location: 135506-136693 bp Feature: domain Description: RVT_N Location: 135542-135788 bp Feature: domain Description: RVT_N Location: 135542-135788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135830-136505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135830-136505 bp Feature: domain Description: GIIM Note: maturase Location: 136589-136691 bp Feature: domain Description: GIIM Note: maturase Location: 136589 -13669 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHD010000025.1 Moorea sp. SIO3A5 3A5_NODE_25, whole genome shotgun sequence (111759 bp)
Overview 1 RT 1: 43456-50993 bp Neighborhood of RT #1 [43456, 51106] DUF4388 OmpR RVT_N RVT-GII GIIM McrA SMC_prok_B SMC_prok_B TilS Feature: gene Location: 43456-44664 bp Feature: domain Description: DUF4388 Location: 43462-44020 bp Feature: domain Description: DUF4388 Location: 43462-44020 bp Feature: domain Description: OmpR Location: 44308-44638 bp Feature: domain Description: OmpR Location: 44308-44638 bp Feature: gene Location: 45463-45591 bp Feature: gene Location: 46020-47540 bp Feature: domain Description: RVT_N Location: 46047-46293 bp Feature: domain Description: RVT_N Location: 46047-46293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46344-46944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46344-46944 bp Feature: domain Description: GIIM Note: maturase Location: 47004-47208 bp Feature: domain Description: GIIM Note: maturase Location: 47004-47208 bp Feature: domain Description: McrA Location: 47223-47505 bp Feature: domain Description: McrA Location: 47223-47505 bp Feature: gene Location: 48168-49931 bp Feature: domain Description: SMC_prok_B Location: 48381-49101 bp Feature: domain Description: SMC_prok_B Location: 48381-4910 1 bp Feature: domain Description: SMC_prok_B Location: 49179-49869 bp Feature: domain Description: SMC_prok_B Location: 49179-49869 bp Feature: gene Location: 50093-51106 bp Feature: domain Description: TilS Location: 50117-50993 bp Feature: domain Description: TilS Location: 50117-50993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4388 (pfam14332), OmpR (COG0745), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), SMC_prok_B (TIGR02168), TilS (pfam09179)

Seq: JAAHHD010000028.1 Moorea sp. SIO3A5 3A5_NODE_28, whole genome shotgun sequence (89996 bp)
Overview 1 RT 1: 17191-23759 bp 2 RT 2: 55695-58854 bp Neighborhood of RT #1 [17191, 23929] UPF0014 WecE RVT_N RVT-GII RVT-GII GIIM McrA DUF561 SPS1 Neighborhood of RT #2 [55695, 58854] RRM_HP0827_like RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 17191-17970 bp Feature: domain Description: UPF0014 Location: 17221-17944 bp Feature: domain Description: UPF0014 Location: 17221-17944 bp Feature: gene Location: 18087-19214 bp Feature: domain Description: WecE Location: 18114-19209 bp Feature: domain Description: WecE Location: 1811 4-19209 bp Feature: gene Location: 20134-21654 bp Feature: domain Description: RVT_N Location: 20161-20407 bp Feature: domain Description: RVT_N Location: 20161-20407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20458-20884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20458-20884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20890-21052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20890-21052 bp Feature: domain Description: GIIM Note: maturase Location: 21109-21283 bp Feature: domain Description: GIIM Note: maturase Location: 211 09-21283 bp Feature: domain Description: McrA Location: 21313-21610 bp Feature: domain Description: McrA Location: 21313-21610 bp Feature: gene Location: 21920-22669 bp Feature: domain Description: DUF561 Location: 21929-22640 bp Feature: domain Description: DUF561 Location: 21929-22640 bp Feature: gene Location: 22829-23929 bp Feature: domain Description: SPS1 Location: 22931-23759 bp Feature: domain Description: SPS1 Location: 22931-23759 bp Feature: gene Location: 55695-55976 bp Feature: domain Description: RRM_HP0827_like Location: 55701-55932 bp Feature: domain Description: RRM_HP0827_like Location: 55701-55932 bp Feature: gene Location: 56305-56523 bp Feature: gene Location: 56807-58378 bp Feature: domain Description: RVT_N Location: 56837-57083 bp Feature: domain Description: RVT_N Location: 56837-57083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57134-57557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57134-57557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57563-57725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57563-57725 bp Feature: domain Description: GIIM Note: maturase Location: 57782-57908 bp Feature: domain Description: GIIM Note: maturase Location: 57782-57908 bp Feature: domain Description: McrA Location: 58040-58316 bp Feature: domain Description: McrA Location: 58040-58316 bp Feature: gene Location: 58377-58625 bp Feature: gene Location: 58690-58854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0014 (pfam03649), WecE (COG0399), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF561 (pfam04481), SPS1 (COG0515), RRM_HP0827_like (cd12399)

Seq: JAAHHD010000039.1 Moorea sp. SIO3A5 3A5_NODE_39, whole genome shotgun sequence (63486 bp)
Overview 1 RT 1: 3985-11128 bp Neighborhood of RT #1 [3985, 11142] RVT-UG25 UvrD DEDDh UvrD rps10 Feature: gene Location: 3985-4227 bp Feature: gene Location: 4384-4659 bp Feature: gene Location: 4748-7795 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 6236-6635 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 6236-6635 bp Feature: gene Location: 7792-10251 bp Feature: domain Description: UvrD Location: 7810-9088 bp Feature: domain Description: UvrD Location: 7810-9088 bp Feature: domain Description: DEDDh Location: 9190-9652 bp Feature: domain Description: DEDDh Location: 9190-9652 bp Feature: domain Description: UvrD Location: 9733-10243 bp Feature: domain Description: UvrD Location: 9733-10243 bp Feature: gene Location: 10825-11142 bp Feature: domain Description: rps10 Location: 10831-11128 bp Feature: domain Description: rps10 Location: 10831-1112 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25, UvrD (COG0210), DEDDh (cd06127), rps10 (CHL00135)

Seq: JAAHHD010000040.1 Moorea sp. SIO3A5 3A5_NODE_40, whole genome shotgun sequence (58133 bp)
Overview 1 RT 1: 35074-41155 bp Neighborhood of RT #1 [35074, 41155] PRK07449 PRK07449 InsQ RVT-GII GIIM McrA RVT_N Feature: gene Location: 35074-37146 bp Feature: domain Description: PRK07449 Location: 35086-36169 bp Feature: domain Description: PRK07449 Location: 35086-36169 bp Feature: domain Description: PRK07449 Location: 36466-37117 bp Feature: domain Description: PRK07449 Location: 36466-37117 bp Feature: gene Location: 37216-38556 bp Feature: domain Description: InsQ Location: 37348-38446 bp Feature: domain Description: InsQ Location: 37348-38446 bp Feature: gene Location: 38691-39857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38697-39261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38697-39261 bp Feature: domain Description: GIIM Note: maturase Location: 39318-39498 bp Feature: domain Description: GIIM Note: maturase Location: 39318-39498 bp Feature: domain Description: McrA Location: 39513-39816 bp Feature: domain Description: McrA Location: 39513 -39816 bp Feature: gene Location: 39953-40378 bp Feature: domain Description: RVT_N Location: 40046-40292 bp Feature: domain Description: RVT_N Location: 40046-40292 bp Feature: gene Location: 41015-41155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07449 (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated), InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHD010000072.1 Moorea sp. SIO3A5 3A5_NODE_72, whole genome shotgun sequence (23882 bp)
Overview 1 RT 1: 6656-12276 bp Neighborhood of RT #1 [6656, 12276] TPR TPR_2 RVT_N RVT-GII RVT-GII GIIM McrA TPR_12 Feature: gene Location: 6656-7915 bp Feature: domain Description: TPR Location: 7316-7568 bp Feature: domain Description: TPR Location: 7316-7568 bp Feature: domain Description: TPR_2 Location: 7610-7700 bp Feature: domain Description: TPR_2 Location: 7610-7700 bp Feature: gene Location: 7899-8453 bp Feature: gene Location: 9125-9913 bp Feature: domain Description: RVT_N Location: 9170-9416 bp Feature: domain Description: RVT_N Location: 9170-9416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-9845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-9845 bp Feature: gene Location: 9990-10811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9996-10107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9996-10107 bp Feature: domain Description: GIIM Note: maturase Location: 10191-10422 bp Feature: domain Description: GIIM Note: maturase Location: 10191-10422 bp Feature: domain Description: McrA Location: 10500-10767 bp Feature: domain Description: McrA Location: 10500-10767 bp Feature: gene Location: 10975-11487 bp Feature: domain Description: TPR_12 Location: 11215-11431 bp Feature: domain Description: TPR_12 Location: 11215-114 31 bp Feature: gene Location: 11641-12276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_2 (pfam07719), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), TPR_12 (pfam13424)

Seq: JAAHHD010000074.1 Moorea sp. SIO3A5 3A5_NODE_74, whole genome shotgun sequence (23077 bp)
Overview 1 RT 1: 13862-19444 bp Neighborhood of RT #1 [13862, 19444] DUF2949 HflB RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 13862-14053 bp Feature: domain Description: DUF2949 Location: 13883-14045 bp Feature: domain Description: DUF2949 Location: 13883-14045 bp Feature: gene Location: 14677-16557 bp Feature: domain Description: HflB Location: 14794-16534 bp Feature: domain Description: HflB Location: 14794-16534 bp Feature: gene Location: 16840-18375 bp Feature: domain Description: RVT_N Location: 16867-17113 bp Feature: domain Description: RVT_N Location: 16867-17113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17164-17614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17164-17614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17617-17782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17617-17782 bp Feature: domain Description: McrA Location: 18037-18340 bp Feature: domain Description: McrA Location: 18037-18340 bp Feature: gene Location: 18649-18858 bp Feature: gene Location: 19241-19444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2949 (pfam11165), HflB (COG0465), RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHD010000077.1 Moorea sp. SIO3A5 3A5_NODE_77, whole genome shotgun sequence (21560 bp)
Overview 1 RT 1: 6692-11824 bp Neighborhood of RT #1 [6692, 12813] RVT-Retrons PGAP1 Feature: gene Location: 6692-7372 bp Feature: gene Location: 7582-8298 bp Feature: gene Location: 8540-9952 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9086-9707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9086-9707 bp Feature: gene Location: 10147-10407 bp Feature: gene Location: 11062-12813 bp Feature: domain Description: PGAP1 Location: 11617-11824 bp Feature: domain Description: PGAP1 Location: 116 17-11824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PGAP1 (pfam07819)

Seq: JAAHHD010000008.1 Moorea sp. SIO3A5 3A5_NODE_8, whole genome shotgun sequence (270444 bp)
Overview 1 RT 1: 25420-32955 bp Neighborhood of RT #1 [25420, 32966] InsQ MscS GH43_GbtXyl43B-like RVT_N RVT-GII GIIM HNHc GT4_PimA-like Feature: gene Location: 25420-26790 bp Feature: domain Description: InsQ Location: 25735-26722 bp Feature: domain Description: InsQ Location: 25735-26722 bp Feature: gene Location: 26980-28584 bp Feature: domain Description: MscS Location: 27094-27811 bp Feature: domain Description: MscS Location: 27094-27811 bp Feature: domain Description: GH43_GbtXyl43B-like Location: 28213-28468 bp Feature: domain Description: GH43_GbtXyl43B-like Location: 28213-28468 bp Feature: gene Location: 29364-31274 bp Feature: domain Description: RVT_N Location: 29427-29673 bp Feature: domain Description: RVT_N Location: 29427-29673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29721-30393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29721-30393 bp Feature: domain Description: GIIM Note: maturase Location: 30465-30696 bp Feature: domain Description: GIIM Note: maturase Location: 30465-30696 bp Feature: domain Description: HNHc Note: nucleases Location: 30906-31068 bp Feature: domain Description: HNHc Note: nucleases Location: 30906-31068 bp Feature: gene Location: 31340-31513 bp Feature: gene Location: 31821-32966 bp Feature: domain Description: GT4_PimA-like Location: 32022-32955 bp Feature: domain Description: GT4_PimA-like Location: 32022-32955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), MscS (COG0668), GH43_GbtXyl43B-like (cd18818), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), GT4_PimA-like (cd03801)

Seq: JAAHHD010000084.1 Moorea sp. SIO3A5 3A5_NODE_84, whole genome shotgun sequence (19294 bp)
Overview 1 RT 1: 4350-9660 bp 2 RT 2: 12159-18337 bp Neighborhood of RT #1 [4350, 9660] YhhI YhhI YhhI RVT_N RVT-GII RVT-GII GIIM HNHc Neighborhood of RT #2 [12159, 18381] DDE_Tnp_1 RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII HNH Feature: gene Location: 4350-4550 bp Feature: gene Location: 4858-6054 bp Feature: domain Description: YhhI Location: 5002-5287 bp Feature: domain Description: YhhI Location: 5002-5287 bp Feature: domain Description: YhhI Location: 5353-5620 bp Feature: domain Description: YhhI Location: 5353-5620 bp Feature: domain Description: YhhI Location: 5755-5971 bp Feature: domain Description: YhhI Location: 5755-5971 bp Feature: gene Location: 6622-7275 bp Feature: domain Description: RVT_N Location: 6685-6928 bp Feature: domain Description: RVT_N Location: 6685-6928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6970-7252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6970-7252 bp Feature: gene Location: 7382-8365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-7634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-7634 bp Feature: domain Description: GIIM Note: maturase Location: 7703-7931 bp Feature: domain Description: GIIM Note: maturase Location: 7703-7931 bp Feature: domain Description: HNHc Note: nucleases Location: 8162-8336 bp Feature: domain Description: HNHc Note: nucleases Location: 8162-8336 bp Feature: gene Location: 9031-9162 bp Feature: gene Location: 9271-9660 bp Feature: gene Location: 12159-12311 bp Feature: gene Location: 12332-13705 bp Feature: domain Description: DDE_Tnp_1 Location: 12863-13388 bp Feature: domain Description: DDE_Tnp_1 Location: 12863-13388 bp Feature: gene Location: 13758-14579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13764-13878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13764-13878 bp Feature: domain Description: GIIM Note: maturase Location: 13968-14190 bp Feature: domain Description: GIIM Note: maturase Location: 13968-14190 bp Feature: domain Description: McrA Location: 14274-14541 bp Feature: domain Description: McrA Location: 14274-14541 bp Feature: gene Location: 14641-15444 bp Feature: domain Description: RVT_N Location: 14686-14932 bp Feature: domain Description: RVT_N Location: 14686-14932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14974-15361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14974-15361 bp Feature: gene Location: 16178-16915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16184-16322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1618 4-16322 bp Feature: domain Description: GIIM Note: maturase Location: 16382-16523 bp Feature: domain Description: GIIM Note: maturase Location: 16382-16523 bp Feature: domain Description: McrA Location: 16568-16874 bp Feature: domain Description: McrA Location: 16568-16874 bp Feature: gene Location: 16962-17699 bp Feature: domain Description: RVT_N Location: 16998-17244 bp Feature: domain Description: RVT_N Location: 16998-17244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17295-17676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17295-17676 bp Feature: gene Location: 17708-18010 bp Feature: gene Location: 18139-18381 bp Feature: domain Description: HNH Note: nucleases Location: 18205-18337 bp Feature: domain Description: HNH Note: nucleases Location: 18 205-18 337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DDE_Tnp_1 (pfam01609), McrA (COG4058), HNH (pfam01844)

Seq: JAAHHD010000009.1 Moorea sp. SIO3A5 3A5_NODE_9, whole genome shotgun sequence (155290 bp)
Overview 1 RT 1: 43759-47104 bp Neighborhood of RT #1 [43759, 47104] Haem_oxygenas_2 RVT-UG4 Feature: gene Location: 43759-44694 bp Feature: domain Description: Haem_oxygenas_2 Location: 44077-44620 bp Feature: domain Description: Haem_oxygenas_2 Location: 44077-44620 bp Feature: gene Location: 45244-45552 bp Feature: gene Location: 45853-46044 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45865-46033 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45865-46033 bp Feature: gene Location: 46328-46687 bp Feature: gene Location: 46871-47104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Haem_oxygenas_2 (pfam14518), RVT-UG4

Seq: JAAHHD010000095.1 Moorea sp. SIO3A5 3A5_NODE_95, whole genome shotgun sequence (13475 bp)
Overview 1 RT 1: 1123-5379 bp Neighborhood of RT #1 [1123, 5379] InsQ RVT_N RVT-GII GIIM HNH Dabb Feature: gene Location: 1123-2115 bp Feature: domain Description: InsQ Location: 1126-2101 bp Feature: domain Description: InsQ Location: 1126-2101 bp Feature: gene Location: 2357-2569 bp Feature: gene Location: 2696-4408 bp Feature: domain Description: RVT_N Location: 2735-2981 bp Feature: domain Description: RVT_N Location: 2735-2981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3023-3674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3023-3674 bp Feature: domain Description: GIIM Note: maturase Location: 3761-3986 bp Feature: domain Description: GIIM Note: maturase Location: 3761-3986 bp Feature: domain Description: HNH Note: nucleases Location: 4232-4364 bp Feature: domain Description: HNH Note: nucleases Location: 4232-4364 bp Feature: gene Location: 4887-5186 bp Feature: domain Description: Dabb Location: 4893-5181 bp Feature: domain Description: Dabb Location: 4893-5181 bp Feature: gene Location: 5230-5379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Dabb (smart00886)