myRT

myRT report for GCA_010672215.1_ASM1067221v1

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Seq: JAAHHI010001053.1 Okeania sp. SIO3C4 3C4_NODE_1053, whole genome shotgun sequence (2898 bp)
Overview 1 RT 1: 40-2621 bp Neighborhood of RT #1 [40, 2621] RVT_N HNHc RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 40-306 bp Feature: domain Description: RVT_N Location: 157-295 bp Feature: domain Description: RVT_N Location: 1 57-295 bp Feature: gene Location: 387-842 bp Feature: domain Description: HNHc Note: nucleases Location: 615-789 bp Feature: domain Description: HNHc Note: nucleases Location: 61 5-789 bp Feature: gene Location: 892-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1 1 1 4 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1297 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 71 -1 297 bp Feature: gene Location: 1626-1991 bp Feature: domain Description: RVT_N Location: 1680-1839 bp Feature: domain Description: RVT_N Location: 1 680-1 839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881-1962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 881 -1 962 bp Feature: gene Location: 2448-2621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), HNHc (smart00507), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010000111.1 Okeania sp. SIO3C4 3C4_NODE_111, whole genome shotgun sequence (7153 bp)
Overview 1 RT 1: 847-6218 bp Neighborhood of RT #1 [847, 6218] TIGR03985 SpoT RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 847-2334 bp Feature: domain Description: TIGR03985 Location: 1558-2317 bp Feature: domain Description: TIGR03985 Location: 1558-2 317 bp Feature: gene Location: 2642-3217 bp Feature: domain Description: SpoT Location: 2657-3167 bp Feature: domain Description: SpoT Location: 2 657-3167 bp Feature: gene Location: 3308-5443 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3569-4172 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3569-4172 bp Feature: domain Description: Cas1_I-II-III Location: 4430-5405 bp Feature: domain Description: Cas1_I-II-III Location: 4430-5405 bp Feature: gene Location: 5458-5730 bp Feature: domain Description: Cas2_I_II_III Location: 5464-5695 bp Feature: domain Description: Cas2 _I_II_III Location: 5464-5695 bp Feature: gene Location: 5859-6218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03985 (CRISPR-associated protein, TIGR03985 family), SpoT (COG0317), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: JAAHHI010001153.1 Okeania sp. SIO3C4 3C4_NODE_1153, whole genome shotgun sequence (2760 bp)
Overview 1 RT 1: 479-2634 bp Neighborhood of RT #1 [479, 2634] YkfC RVT-GII GIIM Feature: gene Location: 479-1909 bp Feature: domain Description: YkfC Location: 533-707 bp Feature: domain Description: YkfC Location: 53 3 -707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782-143 6 bp Feature: domain Description: GIIM Note: maturase Location: 1514-1748 bp Feature: domain Description: GIIM Note: maturase Location: 1514-1748 bp Feature: gene Location: 2479-2634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010001169.1 Okeania sp. SIO3C4 3C4_NODE_1169, whole genome shotgun sequence (2741 bp)
Overview 1 RT 1: 1-2740 bp Neighborhood of RT #1 [1, 2740] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1-411 bp Feature: gene Location: 730-2220 bp Feature: domain Description: RVT_N Location: 757-1003 bp Feature: domain Description: RVT_N Location: 757-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051-1471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051-14 71 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480-1645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 80-164 5 bp Feature: domain Description: GIIM Note: maturase Location: 1702-1849 bp Feature: domain Description: GIIM Note: maturase Location: 1702-184 9 bp Feature: domain Description: McrA Location: 1918-2200 bp Feature: domain Description: McrA Location: 1918-2200 bp Feature: gene Location: 2594-2740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010001172.1 Okeania sp. SIO3C4 3C4_NODE_1172, whole genome shotgun sequence (2739 bp)
Overview 1 RT 1: 3-1648 bp Neighborhood of RT #1 [3, 2451] RVT-UG19 Feature: gene Location: 3-695 bp Feature: gene Location: 724-2451 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1219-1648 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1219-1648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19

Seq: JAAHHI010001257.1 Okeania sp. SIO3C4 3C4_NODE_1257, whole genome shotgun sequence (2632 bp)
Overview 1 RT 1: 546-2013 bp Neighborhood of RT #1 [546, 2039] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 546-2039 bp Feature: domain Description: RVT_N Location: 570-816 bp Feature: domain Description: RVT_N Location: 570-816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86 4-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1293-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1293-1458 bp Feature: domain Description: GIIM Note: maturase Location: 1515-1641 bp Feature: domain Description: GIIM Note: maturase Location: 1515-16 41 bp Feature: domain Description: McrA Location: 1728-2013 bp Feature: domain Description: McrA Location: 1728-2013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010001380.1 Okeania sp. SIO3C4 3C4_NODE_1380, whole genome shotgun sequence (2494 bp)
Overview 1 RT 1: 731-2387 bp Neighborhood of RT #1 [731, 2410] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 731-2410 bp Feature: domain Description: RVT_N Location: 791-1034 bp Feature: domain Description: RVT_N Location: 7 91-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076-1718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107 6-17 18 bp Feature: domain Description: GIIM Note: maturase Location: 1778-2003 bp Feature: domain Description: GIIM Note: maturase Location: 17 7 8-2003 bp Feature: domain Description: HNHc Note: nucleases Location: 2225-2387 bp Feature: domain Description: HNHc Note: nucleases Location: 2225-2387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010001383.1 Okeania sp. SIO3C4 3C4_NODE_1383, whole genome shotgun sequence (2489 bp)
Overview 1 RT 1: 57-2421 bp Neighborhood of RT #1 [57, 2486] RVT_N RVT-GII RVT-GII GIIM HNHc RVT-GII GIIM Feature: gene Location: 57-488 bp Feature: domain Description: RVT_N Location: 93-336 bp Feature: domain Description: RVT_N Location: 93-336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378 -456 bp Feature: gene Location: 556-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568 -994 bp Feature: domain Description: GIIM Note: maturase Location: 1051-1183 bp Feature: domain Description: GIIM Note: maturase Location: 1051-118 3 bp Feature: gene Location: 1310-1681 bp Feature: domain Description: HNHc Note: nucleases Location: 1490-1664 bp Feature: domain Description: HNHc Note: nucleases Location: 1490-1664 bp Feature: gene Location: 1845-2486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1899-2115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 99-2115 bp Feature: domain Description: GIIM Note: maturase Location: 2187-2421 bp Feature: domain Description: GIIM Note: maturase Location: 218 7-2421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010001413.1 Okeania sp. SIO3C4 3C4_NODE_1413, whole genome shotgun sequence (2451 bp)
Overview 1 RT 1: 827-2430 bp Neighborhood of RT #1 [827, 2450] InsQ RVT_N RVT-GII Feature: gene Location: 827-1051 bp Feature: domain Description: InsQ Location: 929-1010 bp Feature: domain Description: InsQ Location: 9 29 -1010 bp Feature: gene Location: 1667-1834 bp Feature: gene Location: 1854-2450 bp Feature: domain Description: RVT_N Location: 1860-1947 bp Feature: domain Description: RVT_N Location: 1860-19 47 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1989-2430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 89 -2430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010001463.1 Okeania sp. SIO3C4 3C4_NODE_1463, whole genome shotgun sequence (2399 bp)
Overview 1 RT 1: 97-2396 bp Neighborhood of RT #1 [97, 2396] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 97-1794 bp Feature: domain Description: RVT_N Location: 145-388 bp Feature: domain Description: RVT_N Location: 145-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-110 2 bp Feature: domain Description: GIIM Note: maturase Location: 1153-1387 bp Feature: domain Description: GIIM Note: maturase Location: 1153-1387 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1774 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1774 bp Feature: gene Location: 1899-2120 bp Feature: gene Location: 2232-2396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010001489.1 Okeania sp. SIO3C4 3C4_NODE_1489, whole genome shotgun sequence (2377 bp)
Overview 1 RT 1: 3-2253 bp Neighborhood of RT #1 [3, 2288] RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 3-194 bp Feature: gene Location: 226-357 bp Feature: gene Location: 619-1065 bp Feature: domain Description: RVT_N Location: 670-910 bp Feature: domain Description: RVT_N Location: 670-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1033 bp Feature: gene Location: 1362-2288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1398-1584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1398-1584 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1869 bp Feature: domain Description: HNHc Note: nucleases Location: 2112-2253 bp Feature: domain Description: HNHc Note: nucleases Location: 211 2-2253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010001650.1 Okeania sp. SIO3C4 3C4_NODE_1650, whole genome shotgun sequence (2201 bp)
Overview 1 RT 1: 612-2088 bp Neighborhood of RT #1 [612, 2111] RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 612-2111 bp Feature: domain Description: RVT_N Location: 636-882 bp Feature: domain Description: RVT_N Location: 636-882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359-1524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359-1524 bp Feature: domain Description: GIIM Note: maturase Location: 1581-1782 bp Feature: domain Description: GIIM Note: maturase Location: 1581-1782 bp Feature: domain Description: HNHc Note: nucleases Location: 1932-2088 bp Feature: domain Description: HNHc Note: nucleases Location: 1932-2088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010001659.1 Okeania sp. SIO3C4 3C4_NODE_1659, whole genome shotgun sequence (2190 bp)
Overview 1 RT 1: 111-2102 bp Neighborhood of RT #1 [111, 2102] RVT_N RVT-GII GIIM McrA Feature: gene Location: 111-1643 bp Feature: domain Description: RVT_N Location: 141-378 bp Feature: domain Description: RVT_N Location: 141-378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1065 bp Feature: domain Description: GIIM Note: maturase Location: 1125-1317 bp Feature: domain Description: GIIM Note: maturase Location: 1125-13 17 bp Feature: domain Description: McrA Location: 1380-1623 bp Feature: domain Description: McrA Location: 13 80-1623 bp Feature: gene Location: 1896-2102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010001756.1 Okeania sp. SIO3C4 3C4_NODE_1756, whole genome shotgun sequence (2090 bp)
Overview 1 RT 1: 700-2080 bp Neighborhood of RT #1 [700, 2088] RVT_N RVT-GII Feature: gene Location: 700-963 bp Feature: gene Location: 1050-1316 bp Feature: gene Location: 1543-2088 bp Feature: domain Description: RVT_N Location: 1660-1903 bp Feature: domain Description: RVT_N Location: 1660-1903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1951-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1951-2080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010001825.1 Okeania sp. SIO3C4 3C4_NODE_1825, whole genome shotgun sequence (2020 bp)
Overview 1 RT 1: 200-1985 bp Neighborhood of RT #1 [200, 2017] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 200-358 bp Feature: gene Location: 518-2017 bp Feature: domain Description: RVT_N Location: 542-788 bp Feature: domain Description: RVT_N Location: 542-788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1265-1430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1265-1430 bp Feature: domain Description: GIIM Note: maturase Location: 1487-1688 bp Feature: domain Description: GIIM Note: maturase Location: 1487-1688 bp Feature: domain Description: McrA Location: 1697-1985 bp Feature: domain Description: McrA Location: 1697-1985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010000185.1 Okeania sp. SIO3C4 3C4_NODE_185, whole genome shotgun sequence (6029 bp)
Overview 1 RT 1: 3422-5580 bp Neighborhood of RT #1 [3422, 5594] YfmG RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 3422-3628 bp Feature: domain Description: YfmG Location: 3452-3623 bp Feature: domain Description: YfmG Location: 3452-3623 bp Feature: gene Location: 3829-4032 bp Feature: gene Location: 4217-5077 bp Feature: domain Description: RVT_N Location: 4334-4577 bp Feature: domain Description: RVT_N Location: 4334-4577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4625-5006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4625-5006 bp Feature: gene Location: 5049-5594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082-5316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082-5316 bp Feature: domain Description: GIIM Note: maturase Location: 5391-5580 bp Feature: domain Description: GIIM Note: maturase Location: 5391-5580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010000202.1 Okeania sp. SIO3C4 3C4_NODE_202, whole genome shotgun sequence (5842 bp)
Overview 1 RT 1: 3243-5694 bp Neighborhood of RT #1 [3243, 5729] InsQ RVT-GII Feature: gene Location: 3243-4439 bp Feature: domain Description: InsQ Location: 3354-4398 bp Feature: domain Description: InsQ Location: 3354-4398 bp Feature: gene Location: 5057-5242 bp Feature: gene Location: 5280-5729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5379-5694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5379-5694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII

Seq: JAAHHI010002105.1 Okeania sp. SIO3C4 3C4_NODE_2105, whole genome shotgun sequence (1763 bp)
Overview 1 RT 1: 1-1747 bp Neighborhood of RT #1 [1, 1761] Uma2 RVT-GII GIIM Feature: gene Location: 1-387 bp Feature: domain Description: Uma2 Location: 28-388 bp Feature: domain Description: Uma2 Location: 28-388 bp Feature: gene Location: 580-804 bp Feature: gene Location: 967-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1486 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1747 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010002172.1 Okeania sp. SIO3C4 3C4_NODE_2172, whole genome shotgun sequence (1710 bp)
Overview 1 RT 1: 2-1585 bp Neighborhood of RT #1 [2, 1707] McrA RVT-GII GIIM HNH Feature: gene Location: 2-304 bp Feature: domain Description: McrA Location: 80-302 bp Feature: domain Description: McrA Location: 80-302 bp Feature: gene Location: 436-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-901 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1237 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1237 bp Feature: domain Description: HNH Note: nucleases Location: 1453-1585 bp Feature: domain Description: HNH Note: nucleases Location: 1453-1585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHI010002230.1 Okeania sp. SIO3C4 3C4_NODE_2230, whole genome shotgun sequence (1663 bp)
Overview 1 RT 1: 319-1615 bp Neighborhood of RT #1 [319, 1662] McrA RVT-GII GIIM RVT-GII Feature: gene Location: 319-630 bp Feature: domain Description: McrA Location: 361-598 bp Feature: domain Description: McrA Location: 361-598 bp Feature: gene Location: 689-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701-869 bp Feature: domain Description: GIIM Note: maturase Location: 941-1130 bp Feature: domain Description: GIIM Note: maturase Location: 941-1130 bp Feature: gene Location: 1234-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237-1615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010000023.1 Okeania sp. SIO3C4 3C4_NODE_23, whole genome shotgun sequence (21222 bp)
Overview 1 RT 1: 28-2528 bp Neighborhood of RT #1 [28, 2528] RVT-GII GIIM McrA Feature: gene Location: 28-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121-661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121 -661 bp Feature: domain Description: GIIM Note: maturase Location: 760-991 bp Feature: domain Description: GIIM Note: maturase Location: 760-991 bp Feature: domain Description: McrA Location: 1051-1351 bp Feature: domain Description: McrA Location: 1051-1351 bp Feature: gene Location: 1612-1779 bp Feature: gene Location: 1896-2528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010002364.1 Okeania sp. SIO3C4 3C4_NODE_2364, whole genome shotgun sequence (1569 bp)
Overview 1 RT 1: 98-1566 bp Neighborhood of RT #1 [98, 1566] HNH RVT-GII GIIM Feature: gene Location: 98-514 bp Feature: domain Description: HNH Note: nucleases Location: 263-392 bp Feature: domain Description: HNH Note: nucleases Location: 263-392 bp Feature: gene Location: 624-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-999 bp Feature: domain Description: GIIM Note: maturase Location: 1101-1281 bp Feature: domain Description: GIIM Note: maturase Location: 1101-1281 bp Feature: gene Location: 1360-1566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010002405.1 Okeania sp. SIO3C4 3C4_NODE_2405, whole genome shotgun sequence (1534 bp)
Overview 1 RT 1: 1-1053 bp Neighborhood of RT #1 [1, 1067] RVT-GII RVT-GII GIIM Feature: gene Location: 1-525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100-481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100-481 bp Feature: gene Location: 612-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-792 bp Feature: domain Description: GIIM Note: maturase Location: 864-1053 bp Feature: domain Description: GIIM Note: maturase Location: 864-1053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010002464.1 Okeania sp. SIO3C4 3C4_NODE_2464, whole genome shotgun sequence (1494 bp)
Overview 1 RT 1: 164-1469 bp Neighborhood of RT #1 [164, 1492] RVT-GII GIIM HNHc Feature: gene Location: 164-1492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167-800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167-800 bp Feature: domain Description: GIIM Note: maturase Location: 857-1085 bp Feature: domain Description: GIIM Note: maturase Location: 857-1085 bp Feature: domain Description: HNHc Note: nucleases Location: 1295-1469 bp Feature: domain Description: HNHc Note: nucleases Location: 1295-1469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010002471.1 Okeania sp. SIO3C4 3C4_NODE_2471, whole genome shotgun sequence (1489 bp)
Overview 1 RT 1: 468-1473 bp Neighborhood of RT #1 [468, 1487] RVT-GII GIIM Feature: gene Location: 468-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1212 bp Feature: domain Description: GIIM Note: maturase Location: 1287-1473 bp Feature: domain Description: GIIM Note: maturase Location: 1287-1473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010002634.1 Okeania sp. SIO3C4 3C4_NODE_2634, whole genome shotgun sequence (1388 bp)
Overview 1 RT 1: 244-1320 bp Neighborhood of RT #1 [244, 1385] RVT_N RVT_N RVT-GII RVT-GII Feature: gene Location: 244-510 bp Feature: domain Description: RVT_N Location: 361-499 bp Feature: domain Description: RVT_N Location: 361-499 bp Feature: gene Location: 494-1078 bp Feature: domain Description: RVT_N Location: 500-605 bp Feature: domain Description: RVT_N Location: 500-605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653-1034 bp Feature: gene Location: 1200-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1206-1320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1206-1320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010000027.1 Okeania sp. SIO3C4 3C4_NODE_27, whole genome shotgun sequence (12507 bp)
Overview 1 RT 1: 2-3384 bp Neighborhood of RT #1 [2, 3384] RVT_N RVT-GII Feature: gene Location: 2-631 bp Feature: domain Description: RVT_N Location: 68-314 bp Feature: domain Description: RVT_N Location: 68-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356-545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356-545 bp Feature: gene Location: 1384-1899 bp Feature: gene Location: 1912-3384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010002783.1 Okeania sp. SIO3C4 3C4_NODE_2783, whole genome shotgun sequence (1300 bp)
Overview 1 RT 1: 1-1167 bp Neighborhood of RT #1 [1, 1274] RVT_N RVT_N RVT-GII Feature: gene Location: 1-129 bp Feature: domain Description: RVT_N Location: 4-127 bp Feature: domain Description: RVT_N Location: 4-127 bp Feature: gene Location: 747-1274 bp Feature: domain Description: RVT_N Location: 807-1044 bp Feature: domain Description: RVT_N Location: 807-1044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089-1167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010002885.1 Okeania sp. SIO3C4 3C4_NODE_2885, whole genome shotgun sequence (1236 bp)
Overview 1 RT 1: 3-1211 bp Neighborhood of RT #1 [3, 1211] RVT_N RVT-GII RVT_N Feature: gene Location: 3-458 bp Feature: domain Description: RVT_N Location: 9-117 bp Feature: domain Description: RVT_N Location: 9-117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162-447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162-447 bp Feature: gene Location: 442-708 bp Feature: domain Description: RVT_N Location: 559-697 bp Feature: domain Description: RVT_N Location: 559-697 bp Feature: gene Location: 939-1211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010002899.1 Okeania sp. SIO3C4 3C4_NODE_2899, whole genome shotgun sequence (1229 bp)
Overview 1 RT 1: 98-1014 bp Neighborhood of RT #1 [98, 1028] McrA RVT-GII GIIM Feature: gene Location: 98-454 bp Feature: domain Description: McrA Location: 113-422 bp Feature: domain Description: McrA Location: 113-422 bp Feature: gene Location: 468-1028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-753 bp Feature: domain Description: GIIM Note: maturase Location: 828-1014 bp Feature: domain Description: GIIM Note: maturase Location: 828-1014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010003011.1 Okeania sp. SIO3C4 3C4_NODE_3011, whole genome shotgun sequence (1162 bp)
Overview 1 RT 1: 1-811 bp Neighborhood of RT #1 [1, 843] RVT-GII GIIM HNHc Feature: gene Location: 1-843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-199 bp Feature: domain Description: GIIM Note: maturase Location: 271-505 bp Feature: domain Description: GIIM Note: maturase Location: 271-505 bp Feature: domain Description: HNHc Note: nucleases Location: 694-811 bp Feature: domain Description: HNHc Note: nucleases Location: 694-811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHI010003050.1 Okeania sp. SIO3C4 3C4_NODE_3050, whole genome shotgun sequence (1145 bp)
Overview 1 RT 1: 3-973 bp Neighborhood of RT #1 [3, 1035] RVT_N RVT-GII Feature: gene Location: 3-137 bp Feature: gene Location: 184-1035 bp Feature: domain Description: RVT_N Location: 223-469 bp Feature: domain Description: RVT_N Location: 223-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHI010003072.1 Okeania sp. SIO3C4 3C4_NODE_3072, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 1-1119 bp Neighborhood of RT #1 [1, 1136] PRK12275 RVT-CRISPR-like RVT-CRISPR-like Feature: gene Location: 1-228 bp Feature: domain Description: PRK12275 Location: 4-223 bp Feature: domain Description: PRK12275 Location: 4-223 bp Feature: gene Location: 277-528 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 286-520 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 286-520 bp Feature: gene Location: 690-1136 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 900-1119 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 900-1119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12275 (hypothetical protein; Reviewed), RVT-CRISPR

Seq: JAAHHI010003099.1 Okeania sp. SIO3C4 3C4_NODE_3099, whole genome shotgun sequence (1123 bp)
Overview 1 RT 1: 2-1119 bp Neighborhood of RT #1 [2, 1121] RVT-GII GIIM Feature: gene Location: 2-151 bp Feature: gene Location: 777-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-936 bp Feature: domain Description: GIIM Note: maturase Location: 1008-1119 bp Feature: domain Description: GIIM Note: maturase Location: 1008-1119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHI010000362.1 Okeania sp. SIO3C4 3C4_NODE_362, whole genome shotgun sequence (4650 bp)
Overview 1 RT 1: 453-4443 bp Neighborhood of RT #1 [453, 4649] RVT_N RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 453-2321 bp Feature: domain Description: RVT_N Location: 570-813 bp Feature: domain Description: RVT_N Location: 570-813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 861-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 861-1554 bp Feature: domain Description: GIIM Note: maturase Location: 1626-1860 bp Feature: domain Description: GIIM Note: maturase Location: 1626-1860 bp Feature: domain Description: McrA Location: 1944-2253 bp Feature: domain Description: McrA Location: 1944-2253 bp Feature: gene Location: 3456-4649 bp Feature: domain Description: RVT_N Location: 3498-3726 bp Feature: domain Description: RVT_N Location: 3498-3726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3762-4443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3762-4443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010000615.1 Okeania sp. SIO3C4 3C4_NODE_615, whole genome shotgun sequence (3781 bp)
Overview 1 RT 1: 2-3778 bp Neighborhood of RT #1 [2, 3778] Uma2 TPR RVT-Retrons Feature: gene Location: 2-556 bp Feature: domain Description: Uma2 Location: 32-428 bp Feature: domain Description: Uma2 Location: 32-428 bp Feature: gene Location: 1028-2989 bp Feature: domain Description: TPR Location: 1058-1229 bp Feature: domain Description: TPR Location: 1058-1229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1679-2303 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1679-2303 bp Feature: gene Location: 3284-3778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), TPR (smart00028), RVT-Retrons

Seq: JAAHHI010000634.1 Okeania sp. SIO3C4 3C4_NODE_634, whole genome shotgun sequence (3734 bp)
Overview 1 RT 1: 283-3156 bp Neighborhood of RT #1 [283, 3170] RVT_N RVT-GII GIIM McrA Bcp Feature: gene Location: 283-2223 bp Feature: domain Description: RVT_N Location: 400-643 bp Feature: domain Description: RVT_N Location: 400-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-1381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1687 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1687 bp Feature: domain Description: McrA Location: 1771-2056 bp Feature: domain Description: McrA Location: 1771-2056 bp Feature: gene Location: 2647-2781 bp Feature: gene Location: 2808-3170 bp Feature: domain Description: Bcp Location: 2814-3156 bp Feature: domain Description: Bcp Location: 2814-3156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Bcp (COG1225)

Seq: JAAHHI010000069.1 Okeania sp. SIO3C4 3C4_NODE_69, whole genome shotgun sequence (8383 bp)
Overview 1 RT 1: 92-2244 bp Neighborhood of RT #1 [92, 2258] RVT-GII OmpR CheW Feature: gene Location: 92-451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-236 bp Feature: gene Location: 1358-1723 bp Feature: domain Description: OmpR Location: 1367-1721 bp Feature: domain Description: OmpR Location: 1367-1721 bp Feature: gene Location: 1740-2258 bp Feature: domain Description: CheW Location: 1818-2244 bp Feature: domain Description: CheW Location: 1818-2244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, OmpR (COG0745), CheW (smart00260)

Seq: JAAHHI010000822.1 Okeania sp. SIO3C4 3C4_NODE_822, whole genome shotgun sequence (3286 bp)
Overview 1 RT 1: 9-3132 bp Neighborhood of RT #1 [9, 3215] trpD RVT_N RVT-GII GIIM McrA Feature: gene Location: 9-152 bp Feature: gene Location: 323-1390 bp Feature: domain Description: trpD Location: 347-1382 bp Feature: domain Description: trpD Location: 347-1382 bp Feature: gene Location: 1593-3215 bp Feature: domain Description: RVT_N Location: 1599-1704 bp Feature: domain Description: RVT_N Location: 1599-1704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752-2448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752-2448 bp Feature: domain Description: GIIM Note: maturase Location: 2520-2754 bp Feature: domain Description: GIIM Note: maturase Location: 2520-2754 bp Feature: domain Description: McrA Location: 2838-3132 bp Feature: domain Description: McrA Location: 2838-3132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trpD (TIGR01245), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010000852.1 Okeania sp. SIO3C4 3C4_NODE_852, whole genome shotgun sequence (3238 bp)
Overview 1 RT 1: 222-1849 bp Neighborhood of RT #1 [222, 1851] RVT-GII GIIM HNHc RVT-GII RVT_N RVT-GII Feature: gene Location: 222-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234-330 bp Feature: domain Description: GIIM Note: maturase Location: 387-615 bp Feature: domain Description: GIIM Note: maturase Location: 387-615 bp Feature: domain Description: HNHc Note: nucleases Location: 813-999 bp Feature: domain Description: HNHc Note: nucleases Location: 813-999 bp Feature: gene Location: 1090-1434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096-140 8 bp Feature: gene Location: 1441-1851 bp Feature: domain Description: RVT_N Location: 1567-1714 bp Feature: domain Description: RVT_N Location: 1567-1714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1756-1849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1756-1849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHI010000879.1 Okeania sp. SIO3C4 3C4_NODE_879, whole genome shotgun sequence (3195 bp)
Overview 1 RT 1: 798-3055 bp Neighborhood of RT #1 [798, 3192] PLN00072 RVT-GII GIIM McrA RVT-GII Feature: gene Location: 798-929 bp Feature: gene Location: 1142-1609 bp Feature: domain Description: PLN00072 Location: 1145-1598 bp Feature: domain Description: PLN00072 Location: 1145-1598 bp Feature: gene Location: 1704-2708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1713-1926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1713-1926 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2232 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2232 bp Feature: domain Description: McrA Location: 2271-2604 bp Feature: domain Description: McrA Location: 2271-2604 bp Feature: gene Location: 2659-3192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674-3055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674-3055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN00072 (3-isopropylmalate isomerase/dehydratase small subunit; Provisional), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010000945.1 Okeania sp. SIO3C4 3C4_NODE_945, whole genome shotgun sequence (3068 bp)
Overview 1 RT 1: 1385-3035 bp Neighborhood of RT #1 [1385, 3067] ycf35 DUF2997 RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1385-1771 bp Feature: domain Description: ycf35 Location: 1388-1766 bp Feature: domain Description: ycf35 Location: 1388-1766 bp Feature: gene Location: 1817-1978 bp Feature: domain Description: DUF2997 Location: 1823-1916 bp Feature: domain Description: DUF2997 Location: 1823-1916 bp Feature: gene Location: 2105-3067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2111-2306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2111-2306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2315-2480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2315-2480 bp Feature: domain Description: GIIM Note: maturase Location: 2537-2666 bp Feature: domain Description: GIIM Note: maturase Location: 2537-2666 bp Feature: domain Description: McrA Location: 2747-3035 bp Feature: domain Description: McrA Location: 2747-3035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ycf35 (CHL00193), DUF2997 (pfam11211), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHI010000997.1 Okeania sp. SIO3C4 3C4_NODE_997, whole genome shotgun sequence (2988 bp)
Overview 1 RT 1: 2-2966 bp Neighborhood of RT #1 [2, 2986] McrA RVT-GII GIIM RVT_N RVT-GII RVT_N YfmG Feature: gene Location: 2-367 bp Feature: domain Description: McrA Location: 17-329 bp Feature: domain Description: McrA Location: 17-329 bp Feature: gene Location: 468-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-648 bp Feature: domain Description: GIIM Note: maturase Location: 723-909 bp Feature: domain Description: GIIM Note: maturase Location: 723-909 bp Feature: gene Location: 1013-1573 bp Feature: domain Description: RVT_N Location: 1019-1103 bp Feature: domain Description: RVT_N Location: 1019-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151-1532 bp Feature: gene Location: 1630-1845 bp Feature: domain Description: RVT_N Location: 1747-1834 bp Feature: domain Description: RVT_N Location: 1747-1834 bp Feature: gene Location: 2423-2986 bp Feature: domain Description: YfmG Location: 2546-2966 bp Feature: domain Description: YfmG Location: 2546-2966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), YfmG (COG1262)