myRT

myRT report for GCA_010672365.1_ASM1067236v1

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Seq: JAAHGV010001812.1 Microcoleus sp. SIO2G3 2G3_NODE_1812, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1573 bp Neighborhood of RT #1 [1, 1573] RVT-GII RVT_N Feature: gene Location: 1-171 bp Feature: gene Location: 168-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 86-582 bp Feature: gene Location: 1118-1402 bp Feature: domain Description: RVT_N Location: 1205-1385 bp Feature: domain Description: RVT_N Location: 1 205-1 385 bp Feature: gene Location: 1397-1573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655)

Seq: JAAHGV010002252.1 Microcoleus sp. SIO2G3 2G3_NODE_2252, whole genome shotgun sequence (1612 bp)
Overview 1 RT 1: 125-1611 bp Neighborhood of RT #1 [125, 1611] RVT-DGRs Feature: gene Location: 125-1183 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 332-974 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 332 -974 bp Feature: gene Location: 1459-1611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAHGV010002673.1 Microcoleus sp. SIO2G3 2G3_NODE_2673, whole genome shotgun sequence (1410 bp)
Overview 1 RT 1: 3-1320 bp Neighborhood of RT #1 [3, 1352] RVT-GII GIIM HNHc Feature: gene Location: 3-1352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-651 bp Feature: domain Description: GIIM Note: maturase Location: 702-936 bp Feature: domain Description: GIIM Note: maturase Location: 702-93 6 bp Feature: domain Description: HNHc Note: nucleases Location: 1167-1320 bp Feature: domain Description: HNHc Note: nucleases Location: 1167-13 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHGV010003556.1 Microcoleus sp. SIO2G3 2G3_NODE_3556, whole genome shotgun sequence (1082 bp)
Overview 1 RT 1: 104-965 bp Neighborhood of RT #1 [104, 1006] RVT_N RVT-GII Feature: gene Location: 104-1006 bp Feature: domain Description: RVT_N Location: 110-248 bp Feature: domain Description: RVT_N Location: 110-24 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHGV010003688.1 Microcoleus sp. SIO2G3 2G3_NODE_3688, whole genome shotgun sequence (1040 bp)
Overview 1 RT 1: 87-841 bp Neighborhood of RT #1 [87, 924] RVT-GII GIIM Feature: gene Location: 87-317 bp Feature: gene Location: 469-924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475 -5 92 bp Feature: domain Description: GIIM Note: maturase Location: 700-841 bp Feature: domain Description: GIIM Note: maturase Location: 700-841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHGV010000044.1 Microcoleus sp. SIO2G3 2G3_NODE_44, whole genome shotgun sequence (8450 bp)
Overview 1 RT 1: 6964-8288 bp Neighborhood of RT #1 [6964, 8449] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Feature: gene Location: 6964-7239 bp Feature: domain Description: Cas2_I_II_III Location: 6973-7198 bp Feature: domain Description: Cas2_I_II_III Location: 6 973-7198 bp Feature: gene Location: 7240-7908 bp Feature: domain Description: Cas1_I-II-III Location: 7246-7870 bp Feature: domain Description: Cas1_I-II-III Location: 7246 -7870 bp Feature: gene Location: 8000-8449 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8012-8288 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8012-8288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: JAAHGV010000045.1 Microcoleus sp. SIO2G3 2G3_NODE_45, whole genome shotgun sequence (21023 bp)
Overview 1 RT 1: 17714-21020 bp Neighborhood of RT #1 [17714, 21020] esterase_phb KOG4768 RVT-GII McrA Feature: gene Location: 17714-18178 bp Feature: domain Description: esterase_phb Location: 17717-18125 bp Feature: domain Description: esterase_phb Location: 17 7 17 -18125 bp Feature: gene Location: 18384-18611 bp Feature: domain Description: KOG4768 Location: 18453-18570 bp Feature: domain Description: KOG47 68 Location: 18453-1857 0 bp Feature: gene Location: 19176-20570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19332-19992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19332-19992 bp Feature: domain Description: McrA Location: 20217-20559 bp Feature: domain Description: McrA Location: 20217 -20559 bp Feature: gene Location: 20637-21020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT esterase_phb (TIGR01840), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, McrA (COG4058)

Seq: JAAHGV010000461.1 Microcoleus sp. SIO2G3 2G3_NODE_461, whole genome shotgun sequence (4678 bp)
Overview 1 RT 1: 1-2843 bp Neighborhood of RT #1 [1, 2845] RVT_N RVT-GII RTPR PPOX_FMN_cyano Feature: gene Location: 1-1110 bp Feature: domain Description: RVT_N Location: 43-289 bp Feature: domain Description: RVT_N Location: 43-28 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-1015 bp Feature: gene Location: 1755-2141 bp Feature: domain Description: RTPR Location: 1782-2124 bp Feature: domain Description: RTPR Location: 178 2-2124 bp Feature: gene Location: 2261-2845 bp Feature: domain Description: PPOX_FMN_cyano Location: 2270-2843 bp Feature: domain Description: PPOX_FMN_cyano Location: 2270-28 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, RTPR (TIGR02505), PPOX_FMN_cyano (TIGR04026)