myRT

myRT report for GCA_010672505.1_ASM1067250v1

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Seq: JAAHGK010001137.1 Okeania sp. SIO2B9 2B9_NODE_1137, whole genome shotgun sequence (2486 bp)
Overview 1 RT 1: 275-2276 bp Neighborhood of RT #1 [275, 2380] Bcp RVT_N RVT-GII GIIM McrA Feature: gene Location: 275-409 bp Feature: domain Description: Bcp Location: 290-401 bp Feature: domain Description: Bcp Location: 290-401 bp Feature: gene Location: 497-2380 bp Feature: RT Description: RVT_N Location: 614-857 bp Feature: RT Description: RVT_N Location: 61 4-857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905-1 598 bp Feature: domain Description: GIIM Note: maturase Location: 1670-1904 bp Feature: domain Description: GIIM Note: maturase Location: 1 670-1 904 bp Feature: domain Description: McrA Location: 1943-2276 bp Feature: domain Description: McrA Location: 1 943-2276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bcp (COG1225), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHGK010001277.1 Okeania sp. SIO2B9 2B9_NODE_1277, whole genome shotgun sequence (2180 bp)
Overview 1 RT 1: 94-2090 bp Neighborhood of RT #1 [94, 2179] RVT-GII OrfB_Zn_ribbon Beta-lactamase2 Feature: gene Location: 94-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106-355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106-355 bp Feature: gene Location: 447-875 bp Feature: domain Description: OrfB_Zn_ribbon Location: 654-786 bp Feature: domain Description: OrfB_Zn_ribbon Location: 654-786 bp Feature: gene Location: 959-2179 bp Feature: domain Description: Beta-lactamase2 Location: 1484-2090 bp Feature: domain Description: Beta-lactamase2 Location: 1484-2 090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OrfB_Zn_ribbon (pfam07282), RVT-GII, Beta-lactamase2 (pfam13354)

Seq: JAAHGK010001280.1 Okeania sp. SIO2B9 2B9_NODE_1280, whole genome shotgun sequence (2173 bp)
Overview 1 RT 1: 280-2167 bp Neighborhood of RT #1 [280, 2172] COG3503 RVT-GII Cyt_C5_DNA_methylase Feature: gene Location: 280-1365 bp Feature: domain Description: COG3503 Location: 328-1312 bp Feature: domain Description: COG3 503 Location: 3 28-13 12 bp Feature: gene Location: 1532-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-1715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 5-1715 bp Feature: gene Location: 2035-2172 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 2044-2167 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 2044-2167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cyt_C5_DNA_methylase (cl30459), COG3503 (Uncharacterized membrane protein )

Seq: JAAHGK010000163.1 Okeania sp. SIO2B9 2B9_NODE_163, whole genome shotgun sequence (8337 bp)
Overview 1 RT 1: 4440-8167 bp Neighborhood of RT #1 [4440, 8167] BaeS RVT_N RVT-GII GIIM HNH Feature: gene Location: 4440-4598 bp Feature: gene Location: 5078-5743 bp Feature: domain Description: BaeS Location: 5117-5711 bp Feature: domain Description: BaeS Location: 5117-5711 bp Feature: gene Location: 5897-7738 bp Feature: RT Description: RVT_N Location: 6014-6257 bp Feature: RT Description: RVT_N Location: 6014 -6257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6305-6995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6305-6995 bp Feature: domain Description: GIIM Note: maturase Location: 7070-7304 bp Feature: domain Description: GIIM Note: maturase Location: 7070-7304 bp Feature: domain Description: HNH Note: nucleases Location: 7517-7652 bp Feature: domain Description: HNH Note: nucleases Location: 7517-7652 bp Feature: gene Location: 7967-8167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHGK010000196.1 Okeania sp. SIO2B9 2B9_NODE_196, whole genome shotgun sequence (7807 bp)
Overview 1 RT 1: 627-7686 bp Neighborhood of RT #1 [627, 7691] Ycf66_N RVT_N RVT-GII GIIM dam DinB Feature: gene Location: 627-941 bp Feature: gene Location: 1674-2822 bp Feature: domain Description: Ycf66_N Location: 1707-1929 bp Feature: domain Description: Ycf66_N Location: 1707-1929 bp Feature: gene Location: 4140-5546 bp Feature: RT Description: RVT_N Location: 4182-4407 bp Feature: RT Description: RVT_N Location: 4182-4407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4449-5130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4449-5 130 bp Feature: domain Description: GIIM Note: maturase Location: 5229-5463 bp Feature: domain Description: GIIM Note: maturase Location: 5 229-5 463 bp Feature: gene Location: 6027-6824 bp Feature: domain Description: dam Location: 6072-6813 bp Feature: domain Description: dam Location: 6072-6813 bp Feature: gene Location: 7188-7691 bp Feature: domain Description: DinB Location: 7191-7686 bp Feature: domain Description: DinB Location: 7191-7686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ycf66_N (pfam07444), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), dam (TIGR00571)

Seq: JAAHGK010000255.1 Okeania sp. SIO2B9 2B9_NODE_255, whole genome shotgun sequence (7096 bp)
Overview 1 RT 1: 2690-5167 bp Neighborhood of RT #1 [2690, 5187] RVT-GII GIIM BHL Feature: gene Location: 2690-2851 bp Feature: gene Location: 3040-3252 bp Feature: gene Location: 3513-4208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516-3837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516 -3837 bp Feature: domain Description: GIIM Note: maturase Location: 3894-4080 bp Feature: domain Description: GIIM Note: maturase Location: 3894-4080 bp Feature: gene Location: 4283-4456 bp Feature: gene Location: 4900-5187 bp Feature: domain Description: BHL Location: 4903-5167 bp Feature: domain Description: BHL Location: 4903-516 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), BHL (smart00411)

Seq: JAAHGK010000274.1 Okeania sp. SIO2B9 2B9_NODE_274, whole genome shotgun sequence (6843 bp)
Overview 1 RT 1: 276-4058 bp Neighborhood of RT #1 [276, 4171] ThyX RVT-GII GIIM McrA RVT_N RVT-GII HNH RVT_N Feature: gene Location: 276-758 bp Feature: domain Description: ThyX Location: 279-735 bp Feature: domain Description: ThyX Location: 27 9-7 35 bp Feature: gene Location: 957-1904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999-1227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999-1227 bp Feature: domain Description: GIIM Note: maturase Location: 1302-1533 bp Feature: domain Description: GIIM Note: maturase Location: 1302-1533 bp Feature: domain Description: McrA Location: 1608-1893 bp Feature: domain Description: McrA Location: 1608-1893 bp Feature: gene Location: 1882-2787 bp Feature: RT Description: RVT_N Location: 2050-2293 bp Feature: RT Description: RVT_N Location: 2050-2293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2341-2722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2341-27 22 bp Feature: gene Location: 3579-3719 bp Feature: domain Description: HNH Note: nucleases Location: 3585-3678 bp Feature: domain Description: HNH Note: nucleases Location: 3585-367 8 bp Feature: gene Location: 3893-4171 bp Feature: RT Description: RVT_N Location: 3899-4058 bp Feature: RT Description: RVT_N Location: 3899-4058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HNH (pfam01844), GIIM (pfam08388), McrA (COG4058), ThyX (COG1351)

Seq: JAAHGK010000520.1 Okeania sp. SIO2B9 2B9_NODE_520, whole genome shotgun sequence (4914 bp)
Overview 1 RT 1: 2320-4910 bp Neighborhood of RT #1 [2320, 4912] YkfC RVT-GII GIIM Feature: gene Location: 2320-2580 bp Feature: gene Location: 2662-2874 bp Feature: gene Location: 3641-4912 bp Feature: domain Description: YkfC Location: 3695-3863 bp Feature: domain Description: YkfC Location: 3695-38 63 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3944-4598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3944-4598 bp Feature: domain Description: GIIM Note: maturase Location: 4676-4910 bp Feature: domain Description: GIIM Note: maturase Location: 4676-4910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, GIIM (pfam08388)