myRT

myRT report for GCA_010672725.1_ASM1067272v1

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Seq: JAAHFY010000006.1 Sphaerospermopsis sp. SIO1G2 1G2_NODE_6, whole genome shotgun sequence (25712 bp)
Overview 1 RT 1: 22486-25506 bp Neighborhood of RT #1 [22486, 25541] YkfC RVT_N RVT-GII GIIM McrA Feature: gene Location: 22486-22908 bp Feature: gene Location: 23203-23415 bp Feature: gene Location: 23646-25541 bp Feature: domain Description: YkfC Location: 23697-23889 bp Feature: domain Description: YkfC Location: 23697-23889 bp Feature: domain Description: RVT_N Location: 23910-24084 bp Feature: domain Description: RVT_N Location: 2391 0-24084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24126-24825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 26-24825 bp Feature: domain Description: GIIM Note: maturase Location: 24927-25158 bp Feature: domain Description: GIIM Note: maturase Location: 24927-251 58 bp Feature: domain Description: McrA Location: 25266-25506 bp Feature: domain Description: McrA Location: 25266-25506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHFY010000086.1 Sphaerospermopsis sp. SIO1G2 1G2_NODE_86, whole genome shotgun sequence (16519 bp)
Overview 1 RT 1: 7856-13297 bp Neighborhood of RT #1 [7856, 13297] LodA FixC RVT-UG4 Avidin Feature: gene Location: 7856-10150 bp Feature: domain Description: LodA Location: 7868-9908 bp Feature: domain Description: LodA Location: 7868-9908 bp Feature: gene Location: 10269-11432 bp Feature: domain Description: FixC Location: 10287-11358 bp Feature: domain Description: FixC Location: 102 87-11358 bp Feature: gene Location: 11687-12313 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11729-12086 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1172 9-12 086 bp Feature: gene Location: 12370-12813 bp Feature: domain Description: Avidin Location: 12469-12721 bp Feature: domain Description: Avidin Location: 12 469-12 72 1 bp Feature: gene Location: 13115-13297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LodA (cd14732), FixC (COG0644), RVT-UG4, Avidin (pfam01382)