myRT

myRT report for GCA_010672895.1_ASM1067289v1

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Seq: JAAHFR010000410.1 Leptolyngbya sp. SIO1D8 1D8_NODE_410, whole genome shotgun sequence (5841 bp)
Overview 1 RT 1: 3-4855 bp Neighborhood of RT #1 [3, 4855] YfmG YfmG RVT-DGRs Avd_like Feature: gene Location: 3-2117 bp Feature: domain Description: YfmG Location: 1377-2097 bp Feature: domain Description: YfmG Location: 1 377-2097 bp Feature: gene Location: 2158-2985 bp Feature: domain Description: YfmG Location: 2248-2965 bp Feature: domain Description: YfmG Location: 2248-2965 bp Feature: gene Location: 3054-4154 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3264-3903 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3264-3903 bp Feature: gene Location: 4138-4497 bp Feature: domain Description: Avd_like Location: 4159-4465 bp Feature: domain Description: Avd_like Location: 41 59-4465 bp Feature: gene Location: 4601-4855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)

Seq: JAAHFR010000587.1 Leptolyngbya sp. SIO1D8 1D8_NODE_587, whole genome shotgun sequence (4719 bp)
Overview 1 RT 1: 3-1315 bp Neighborhood of RT #1 [3, 1315] RVT-GII group_II_RT_mat Feature: gene Location: 3-413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-411 bp Feature: gene Location: 410-739 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 518-725 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 518-72 5 bp Feature: gene Location: 887-1315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: JAAHFR010000681.1 Leptolyngbya sp. SIO1D8 1D8_NODE_681, whole genome shotgun sequence (4192 bp)
Overview 1 RT 1: 2420-4002 bp Neighborhood of RT #1 [2420, 4190] RVT-GII GIIM Feature: gene Location: 2420-2551 bp Feature: gene Location: 2885-3304 bp Feature: gene Location: 3477-4190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3483-3753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 483 -3 753 bp Feature: domain Description: GIIM Note: maturase Location: 3798-4002 bp Feature: domain Description: GIIM Note: maturase Location: 3 798-4002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHFR010000007.1 Leptolyngbya sp. SIO1D8 1D8_NODE_7, whole genome shotgun sequence (29033 bp)
Overview 1 RT 1: 23947-28907 bp Neighborhood of RT #1 [23947, 28981] DUF1016_N DUF1016_N RVT-GII Intron_maturas2 HNHc YhcG YhcG_C Feature: gene Location: 23947-24153 bp Feature: domain Description: DUF1016_N Location: 23953-24145 bp Feature: domain Description: DUF1016_N Location: 23953-24 14 5 bp Feature: gene Location: 24163-24375 bp Feature: domain Description: DUF1016_N Location: 24172-24310 bp Feature: domain Description: DUF1016_N Location: 24 172-24 310 bp Feature: gene Location: 24965-26752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25226-26021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25226-26021 bp Feature: domain Description: Intron_maturas2 Location: 26123-26357 bp Feature: domain Description: Intron_maturas2 Location: 26123-26357 bp Feature: domain Description: HNHc Note: nucleases Location: 26519-26708 bp Feature: domain Description: HNHc Note: nucleases Location: 26519-26708 bp Feature: gene Location: 26917-27201 bp Feature: gene Location: 27926-28981 bp Feature: domain Description: YhcG Location: 27998-28358 bp Feature: domain Description: YhcG Location: 27998-28358 bp Feature: domain Description: YhcG_C Location: 28463-28907 bp Feature: domain Description: YhcG_C Location: 284 63-28907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YhcG (COG4804), YhcG_C

Seq: JAAHFR010000082.1 Leptolyngbya sp. SIO1D8 1D8_NODE_82, whole genome shotgun sequence (11315 bp)
Overview 1 RT 1: 3-1458 bp Neighborhood of RT #1 [3, 1458] RVT-GII Feature: gene Location: 3-749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-747 bp Feature: gene Location: 801-1172 bp Feature: gene Location: 1297-1458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII