myRT

myRT report for GCA_010672995.1_ASM1067299v1

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Seq: JAAHFM010000169.1 Symploca sp. SIO1A3 1A3_NODE_169, whole genome shotgun sequence (11487 bp)
Overview 1 RT 1: 197-4315 bp Neighborhood of RT #1 [197, 4326] RVT_N RVT-GII RVT-GII McrA M20_Acy1_YhaA-like Feature: gene Location: 197-406 bp Feature: gene Location: 958-2463 bp Feature: domain Description: RVT_N Location: 994-1240 bp Feature: domain Description: RVT_N Location: 994-1 240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1291-1717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 291 -1 71 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1717-1885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 7-1 885 bp Feature: domain Description: McrA Location: 2125-2440 bp Feature: domain Description: McrA Location: 21 25-2440 bp Feature: gene Location: 2604-2771 bp Feature: gene Location: 3115-4326 bp Feature: domain Description: M20_Acy1_YhaA-like Location: 3172-4315 bp Feature: domain Description: M20_Acy1 _YhaA-like Location: 31 72-431 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), M20_Acy1_YhaA-like (cd08021)

Seq: JAAHFM010000215.1 Symploca sp. SIO1A3 1A3_NODE_215, whole genome shotgun sequence (10497 bp)
Overview 1 RT 1: 1139-7465 bp Neighborhood of RT #1 [1139, 7470] DNA_S_dndD InsQ RVT_N RVT-GII RVT-GII McrA InsQ rpsU Feature: gene Location: 1139-3205 bp Feature: domain Description: DNA_S_dndD Location: 1142-3089 bp Feature: domain Description: DNA_S_dndD Location: 1142 -3089 bp Feature: gene Location: 3714-4481 bp Feature: domain Description: InsQ Location: 3729-4467 bp Feature: domain Description: InsQ Location: 372 9-4467 bp Feature: gene Location: 4874-6562 bp Feature: domain Description: RVT_N Location: 5030-5276 bp Feature: domain Description: RVT_N Location: 5030-52 76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5327-5747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 7-5747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5756-5921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5756-592 1 bp Feature: domain Description: McrA Location: 6152-6485 bp Feature: domain Description: McrA Location: 6152 -6485 bp Feature: gene Location: 6636-7016 bp Feature: domain Description: InsQ Location: 6642-6966 bp Feature: domain Description: InsQ Location: 6642 -6966 bp Feature: gene Location: 7294-7470 bp Feature: domain Description: rpsU Location: 7297-7465 bp Feature: domain Description: rpsU Location: 72 97-7465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_S_dndD (TIGR03185), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, McrA (COG4058), rpsU (PRK00270)

Seq: JAAHFM010000251.1 Symploca sp. SIO1A3 1A3_NODE_251, whole genome shotgun sequence (9558 bp)
Overview 1 RT 1: 3-5225 bp Neighborhood of RT #1 [3, 5242] HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT_N RVT-GII McrA Uma2 Feature: gene Location: 3-2738 bp Feature: domain Description: HEAT_2 Location: 12-165 bp Feature: domain Description: HEAT_2 Location: 12-165 bp Feature: domain Description: HEAT_2 Location: 297-480 bp Feature: domain Description: HEAT_2 Location: 297-480 bp Feature: domain Description: HEAT_2 Location: 501-720 bp Feature: domain Description: HEAT_2 Location: 501-720 bp Feature: domain Description: HEAT_2 Location: 789-921 bp Feature: domain Description: HEAT_2 Location: 789-921 bp Feature: domain Description: HEAT_2 Location: 1431-1704 bp Feature: domain Description: HEAT_2 Location: 143 1-1704 bp Feature: domain Description: HEAT_2 Location: 1746-1962 bp Feature: domain Description: HEAT_2 Location: 1746-1962 bp Feature: domain Description: HEAT_2 Location: 2130-2352 bp Feature: domain Description: HEAT_2 Location: 213 0-23 52 bp Feature: domain Description: HEAT_2 Location: 2427-2598 bp Feature: domain Description: HEAT_2 Location: 2427-2598 bp Feature: gene Location: 2832-4337 bp Feature: domain Description: RVT_N Location: 2868-3108 bp Feature: domain Description: RVT_N Location: 2868-3 108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3165-3759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 165-3 759 bp Feature: domain Description: McrA Location: 3993-4314 bp Feature: domain Description: McrA Location: 3 993 -43 14 bp Feature: gene Location: 4336-4503 bp Feature: gene Location: 4871-5242 bp Feature: domain Description: Uma2 Location: 4901-5225 bp Feature: domain Description: Uma2 Location: 4901-5225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT_N (pfam13655), RVT-GII, McrA (COG4058), Uma2 (pfam05685)

Seq: JAAHFM010000039.1 Symploca sp. SIO1A3 1A3_NODE_39, whole genome shotgun sequence (34057 bp)
Overview 1 RT 1: 25292-30511 bp Neighborhood of RT #1 [25292, 30511] Telomere_res RVT_N RVT-GII GIIM McrA Feature: gene Location: 25292-26521 bp Feature: domain Description: Telomere_res Location: 25718-26471 bp Feature: domain Description: Telomere_res Location: 25718-264 71 bp Feature: gene Location: 26705-27028 bp Feature: gene Location: 27584-29245 bp Feature: domain Description: RVT_N Location: 27620-27866 bp Feature: domain Description: RVT_N Location: 27620-27866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27911-28520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27911-28520 bp Feature: domain Description: GIIM Note: maturase Location: 28619-28850 bp Feature: domain Description: GIIM Note: maturase Location: 28619-28850 bp Feature: domain Description: McrA Location: 28931-29204 bp Feature: domain Description: McrA Location: 28931-29204 bp Feature: gene Location: 29391-29990 bp Feature: gene Location: 30344-30511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Telomere_res (pfam16684), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHFM010000005.1 Symploca sp. SIO1A3 1A3_NODE_5, whole genome shotgun sequence (23833 bp)
Overview 1 RT 1: 16765-23511 bp Neighborhood of RT #1 [16765, 23657] Phytochelatin RVT_N RVT-GII GIIM HNHc InsQ HNHc RVT_N RVT-GII Feature: gene Location: 16765-16959 bp Feature: gene Location: 17190-17957 bp Feature: domain Description: Phytochelatin Location: 17292-17925 bp Feature: domain Description: Phytochelatin Location: 17292-17925 bp Feature: gene Location: 18339-20006 bp Feature: domain Description: RVT_N Location: 18390-18633 bp Feature: domain Description: RVT_N Location: 18390-18633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18675-19305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18675 -19305 bp Feature: domain Description: GIIM Note: maturase Location: 19362-19590 bp Feature: domain Description: GIIM Note: maturase Location: 19362-195 90 bp Feature: domain Description: HNHc Note: nucleases Location: 19824-19944 bp Feature: domain Description: HNHc Note: nucleases Location: 19824-19944 bp Feature: gene Location: 20660-21946 bp Feature: domain Description: InsQ Location: 20690-21869 bp Feature: domain Description: InsQ Location: 20690-21869 bp Feature: gene Location: 21959-22270 bp Feature: gene Location: 22603-22854 bp Feature: domain Description: HNHc Note: nucleases Location: 22648-22804 bp Feature: domain Description: HNHc Note: nucleases Location: 22648-22804 bp Feature: gene Location: 22935-23657 bp Feature: domain Description: RVT_N Location: 22986-23229 bp Feature: domain Description: RVT_N Location: 22986-23229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23271-23511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23271-235 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phytochelatin (pfam05023), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHFM010000563.1 Symploca sp. SIO1A3 1A3_NODE_563, whole genome shotgun sequence (5436 bp)
Overview 1 RT 1: 796-3678 bp Neighborhood of RT #1 [796, 3678] MetH2 RVT-UG4 Agglutinin_C Feature: gene Location: 796-1005 bp Feature: domain Description: MetH2 Location: 826-1000 bp Feature: domain Description: MetH2 Location: 826 -1000 bp Feature: gene Location: 1081-1242 bp Feature: gene Location: 1290-2420 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1638-2091 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 16 38-2091 bp Feature: gene Location: 2459-3421 bp Feature: domain Description: Agglutinin_C Location: 3089-3353 bp Feature: domain Description: Agglutinin_C Location: 3089-3353 bp Feature: gene Location: 3397-3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetH2 (COG1410), RVT-UG4, Agglutinin_C (pfam18021)

Seq: JAAHFM010000668.1 Symploca sp. SIO1A3 1A3_NODE_668, whole genome shotgun sequence (4923 bp)
Overview 1 RT 1: 420-3903 bp Neighborhood of RT #1 [420, 3903] XisI-like RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 420-683 bp Feature: domain Description: XisI-like Location: 435-642 bp Feature: domain Description: XisI-like Location: 435-642 bp Feature: gene Location: 794-2335 bp Feature: domain Description: RVT_N Location: 821-1067 bp Feature: domain Description: RVT_N Location: 821-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553-1718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553-17 18 bp Feature: domain Description: GIIM Note: maturase Location: 1775-1961 bp Feature: domain Description: GIIM Note: maturase Location: 17 7 5-1961 bp Feature: domain Description: McrA Location: 1976-2276 bp Feature: domain Description: McrA Location: 197 6-227 6 bp Feature: gene Location: 3169-3690 bp Feature: gene Location: 3715-3903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisI-like (cl07462), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHFM010000752.1 Symploca sp. SIO1A3 1A3_NODE_752, whole genome shotgun sequence (4520 bp)
Overview 1 RT 1: 36-4448 bp Neighborhood of RT #1 [36, 4448] XisI-like RVT-GII GIIM McrA AAAA Feature: gene Location: 36-383 bp Feature: domain Description: XisI-like Location: 63-378 bp Feature: domain Description: XisI-like Location: 63-378 bp Feature: gene Location: 1104-2099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1476-1698 bp Feature: domain Description: GIIM Note: maturase Location: 1476-1698 bp Feature: domain Description: McrA Location: 1776-2052 bp Feature: domain Description: McrA Location: 1776-2052 bp Feature: gene Location: 2698-3789 bp Feature: domain Description: AAAA Location: 2758-2884 bp Feature: domain Description: AAAA Location: 2758 -28 8 4 bp Feature: gene Location: 3864-4448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisI-like (cl07462), RVT-GII, GIIM (pfam08388), McrA (COG4058), AAAA (COG1672)

Seq: JAAHFM010000076.1 Symploca sp. SIO1A3 1A3_NODE_76, whole genome shotgun sequence (17117 bp)
Overview 1 RT 1: 2519-7639 bp Neighborhood of RT #1 [2519, 7641] PRK13927 PRK07459 RVT_N RVT-GII GIIM McrA PRK07459 YggE Feature: gene Location: 2519-3526 bp Feature: domain Description: PRK13927 Location: 2522-3500 bp Feature: domain Description: PRK139 27 Location: 2522-3500 bp Feature: gene Location: 4002-4289 bp Feature: domain Description: PRK07459 Location: 4134-4275 bp Feature: domain Description: PRK07459 Location: 4134-4275 bp Feature: gene Location: 4862-6628 bp Feature: domain Description: RVT_N Location: 4904-5150 bp Feature: domain Description: RVT_N Location: 49 04-5150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5192-5867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519 2-5867 bp Feature: domain Description: GIIM Note: maturase Location: 5942-6167 bp Feature: domain Description: GIIM Note: maturase Location: 59 42-6167 bp Feature: domain Description: McrA Location: 6257-6545 bp Feature: domain Description: McrA Location: 6257-6545 bp Feature: gene Location: 6659-6877 bp Feature: domain Description: PRK07459 Location: 6662-6872 bp Feature: domain Description: PRK07459 Location: 6662-6872 bp Feature: gene Location: 6901-7641 bp Feature: domain Description: YggE Location: 6961-7639 bp Feature: domain Description: YggE Location: 69 61-7639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13927 (rod shape-determining protein MreB; Provisional), PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YggE (COG2968)

Seq: JAAHFM010000812.1 Symploca sp. SIO1A3 1A3_NODE_812, whole genome shotgun sequence (4268 bp)
Overview 1 RT 1: 1458-3526 bp Neighborhood of RT #1 [1458, 3765] RVT-UG4 Feature: gene Location: 1458-1841 bp Feature: gene Location: 1858-2058 bp Feature: gene Location: 2701-3765 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3049-3526 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3049-3526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JAAHFM010000958.1 Symploca sp. SIO1A3 1A3_NODE_958, whole genome shotgun sequence (3853 bp)
Overview 1 RT 1: 2-2775 bp Neighborhood of RT #1 [2, 2777] RVT_N RVT-GII GIIM HNHc PRK07459 YggE Feature: gene Location: 2-1633 bp Feature: domain Description: RVT_N Location: 5-203 bp Feature: domain Description: RVT_N Location: 5-203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-911 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1250 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1250 bp Feature: domain Description: HNHc Note: nucleases Location: 1439-1592 bp Feature: domain Description: HNHc Note: nucleases Location: 1439-1592 bp Feature: gene Location: 1825-2004 bp Feature: domain Description: PRK07459 Location: 1831-1975 bp Feature: domain Description: PRK07459 Location: 1831-1975 bp Feature: gene Location: 2022-2777 bp Feature: domain Description: YggE Location: 2100-2775 bp Feature: domain Description: YggE Location: 2100-2775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK07459 (single-stranded DNA-binding protein; Provisional), YggE (COG2968)