myRT

myRT report for GCA_010692375.1_ASM1069237v1

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Seq: JAAHHV010001008.1 Moorea sp. SIO3I7 3I7_NODE_1008, whole genome shotgun sequence (3050 bp)
Overview 1 RT 1: 90-2981 bp Neighborhood of RT #1 [90, 3049] RVT_N RVT-GII RVT-GII GIIM McrA HNH Feature: gene Location: 90-236 bp Feature: gene Location: 479-1990 bp Feature: domain Description: RVT_N Location: 506-752 bp Feature: domain Description: RVT_N Location: 506-752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-1226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-1 226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1235-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 235-1 397 bp Feature: domain Description: GIIM Note: maturase Location: 1454-1640 bp Feature: domain Description: GIIM Note: maturase Location: 1 454-1 640 bp Feature: domain Description: McrA Location: 1646-1955 bp Feature: domain Description: McrA Location: 1 646-1 955 bp Feature: gene Location: 2262-2468 bp Feature: gene Location: 2804-3049 bp Feature: domain Description: HNH Note: nucleases Location: 2846-2981 bp Feature: domain Description: HNH Note: nucleases Location: 2846-2981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNH (pfam01844)

Seq: JAAHHV010001025.1 Moorea sp. SIO3I7 3I7_NODE_1025, whole genome shotgun sequence (2995 bp)
Overview 1 RT 1: 286-2491 bp Neighborhood of RT #1 [286, 2532] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 286-525 bp Feature: gene Location: 975-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1182 bp Feature: domain Description: GIIM Note: maturase Location: 1263-1494 bp Feature: domain Description: GIIM Note: maturase Location: 12 63-1494 bp Feature: gene Location: 1768-2532 bp Feature: domain Description: RVT_N Location: 1816-2062 bp Feature: domain Description: RVT_N Location: 1816-2 062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 104-2 491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: JAAHHV010001049.1 Moorea sp. SIO3I7 3I7_NODE_1049, whole genome shotgun sequence (2950 bp)
Overview 1 RT 1: 129-2904 bp Neighborhood of RT #1 [129, 2948] RRXRR HNH_5 RVT-GII GIIM McrA Feature: gene Location: 129-1385 bp Feature: domain Description: RRXRR Location: 144-663 bp Feature: domain Description: RRXRR Location: 144-663 bp Feature: domain Description: HNH_5 Location: 720-873 bp Feature: domain Description: HNH_5 Location: 720-873 bp Feature: gene Location: 1671-2948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-2247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-2247 bp Feature: domain Description: GIIM Note: maturase Location: 2328-2559 bp Feature: domain Description: GIIM Note: maturase Location: 23 28-2559 bp Feature: domain Description: McrA Location: 2637-2904 bp Feature: domain Description: McrA Location: 263 7-2904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRXRR (pfam14239), HNH_5 (pfam14279), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001056.1 Moorea sp. SIO3I7 3I7_NODE_1056, whole genome shotgun sequence (2926 bp)
Overview 1 RT 1: 201-2582 bp Neighborhood of RT #1 [201, 2725] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 201-386 bp Feature: gene Location: 389-757 bp Feature: gene Location: 866-2725 bp Feature: domain Description: RVT_N Location: 953-1199 bp Feature: domain Description: RVT_N Location: 953-1199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247-1916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124 7-1916 bp Feature: domain Description: GIIM Note: maturase Location: 1988-2219 bp Feature: domain Description: GIIM Note: maturase Location: 1988-2219 bp Feature: domain Description: HNHc Note: nucleases Location: 2426-2582 bp Feature: domain Description: HNHc Note: nucleases Location: 24 26-2582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010001088.1 Moorea sp. SIO3I7 3I7_NODE_1088, whole genome shotgun sequence (2864 bp)
Overview 1 RT 1: 3-2855 bp Neighborhood of RT #1 [3, 2863] Y1_Tnp RVT_N RVT-GII InsQ Feature: gene Location: 3-290 bp Feature: gene Location: 343-762 bp Feature: domain Description: Y1_Tnp Location: 382-748 bp Feature: domain Description: Y1_Tnp Location: 382-748 bp Feature: gene Location: 842-1198 bp Feature: domain Description: RVT_N Location: 851-1061 bp Feature: domain Description: RVT_N Location: 85 1-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1103-1187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1103-1187 bp Feature: gene Location: 1542-1691 bp Feature: gene Location: 2165-2863 bp Feature: domain Description: InsQ Location: 2171-2855 bp Feature: domain Description: InsQ Location: 2171-285 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT_N (pfam13655), RVT-GII, InsQ (COG0675)

Seq: JAAHHV010001106.1 Moorea sp. SIO3I7 3I7_NODE_1106, whole genome shotgun sequence (2822 bp)
Overview 1 RT 1: 210-2734 bp Neighborhood of RT #1 [210, 2820] RVT_N RVT-GII GIIM HNHc OrfB_Zn_ribbon Feature: gene Location: 210-383 bp Feature: gene Location: 605-2434 bp Feature: domain Description: RVT_N Location: 668-914 bp Feature: domain Description: RVT_N Location: 6 6 8-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 2-16 28 bp Feature: domain Description: GIIM Note: maturase Location: 1703-1934 bp Feature: domain Description: GIIM Note: maturase Location: 1703-1934 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-2306 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-2306 bp Feature: gene Location: 2521-2820 bp Feature: domain Description: OrfB_Zn_ribbon Location: 2527-2734 bp Feature: domain Description: OrfB_Zn_ribbon Location: 2527-2734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), OrfB_Zn_ribbon (pfam07282)

Seq: JAAHHV010001126.1 Moorea sp. SIO3I7 3I7_NODE_1126, whole genome shotgun sequence (2788 bp)
Overview 1 RT 1: 100-2339 bp Neighborhood of RT #1 [100, 2368] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 100-297 bp Feature: gene Location: 340-561 bp Feature: gene Location: 854-2368 bp Feature: domain Description: RVT_N Location: 893-1139 bp Feature: domain Description: RVT_N Location: 893-1139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1619-1781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1619-17 81 bp Feature: domain Description: GIIM Note: maturase Location: 1838-1967 bp Feature: domain Description: GIIM Note: maturase Location: 1838-1967 bp Feature: domain Description: McrA Location: 2033-2339 bp Feature: domain Description: McrA Location: 2033-2339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001134.1 Moorea sp. SIO3I7 3I7_NODE_1134, whole genome shotgun sequence (2771 bp)
Overview 1 RT 1: 2-2488 bp Neighborhood of RT #1 [2, 2619] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2-190 bp Feature: gene Location: 754-2619 bp Feature: domain Description: RVT_N Location: 835-1081 bp Feature: domain Description: RVT_N Location: 8 35-108 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1129-1801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1129-18 01 bp Feature: domain Description: GIIM Note: maturase Location: 1876-2107 bp Feature: domain Description: GIIM Note: maturase Location: 18 76-2107 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2488 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-248 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010001145.1 Moorea sp. SIO3I7 3I7_NODE_1145, whole genome shotgun sequence (2746 bp)
Overview 1 RT 1: 2-2585 bp Neighborhood of RT #1 [2, 2611] tRNA_yibK_trmL RVT_N RVT-GII GIIM McrA Feature: gene Location: 2-130 bp Feature: domain Description: tRNA_yibK_trmL Location: 8-131 bp Feature: domain Description: tRNA_yibK_trmL Location: 8-131 bp Feature: gene Location: 664-954 bp Feature: gene Location: 1100-2611 bp Feature: domain Description: RVT_N Location: 1127-1370 bp Feature: domain Description: RVT_N Location: 1127-1370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1424-2027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1424-2027 bp Feature: domain Description: GIIM Note: maturase Location: 2084-2264 bp Feature: domain Description: GIIM Note: maturase Location: 2084-2264 bp Feature: domain Description: McrA Location: 2282-2585 bp Feature: domain Description: McrA Location: 2282-2585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tRNA_yibK_trmL (TIGR00185), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001185.1 Moorea sp. SIO3I7 3I7_NODE_1185, whole genome shotgun sequence (2645 bp)
Overview 1 RT 1: 2-1867 bp Neighborhood of RT #1 [2, 1869] group_II_RT_mat McrA RVT_N RVT-GII Feature: gene Location: 2-157 bp Feature: gene Location: 253-795 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 262-451 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 262-451 bp Feature: domain Description: McrA Location: 451-769 bp Feature: domain Description: McrA Location: 451-769 bp Feature: gene Location: 949-1869 bp Feature: domain Description: RVT_N Location: 976-1222 bp Feature: domain Description: RVT_N Location: 976-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1273-1867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1273-1867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010001189.1 Moorea sp. SIO3I7 3I7_NODE_1189, whole genome shotgun sequence (2640 bp)
Overview 1 RT 1: 1-2639 bp Neighborhood of RT #1 [1, 2639] TPR RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 1-267 bp Feature: domain Description: TPR Location: 7-226 bp Feature: domain Description: TPR Location: 7-226 bp Feature: gene Location: 804-1730 bp Feature: domain Description: RVT_N Location: 840-1086 bp Feature: domain Description: RVT_N Location: 840-1086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 37-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572-1728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572-1728 bp Feature: gene Location: 2016-2447 bp Feature: domain Description: McrA Location: 2118-2400 bp Feature: domain Description: McrA Location: 211 8-2400 bp Feature: gene Location: 2481-2639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHV010001200.1 Moorea sp. SIO3I7 3I7_NODE_1200, whole genome shotgun sequence (2626 bp)
Overview 1 RT 1: 98-2620 bp Neighborhood of RT #1 [98, 2620] RVT-GII GIIM HNHc RVT-GII Feature: gene Location: 98-1174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158-356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158-356 bp Feature: domain Description: GIIM Note: maturase Location: 428-662 bp Feature: domain Description: GIIM Note: maturase Location: 428-662 bp Feature: domain Description: HNHc Note: nucleases Location: 875-1031 bp Feature: domain Description: HNHc Note: nucleases Location: 875-1031 bp Feature: gene Location: 1191-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1212-1317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 12 -1317 bp Feature: gene Location: 1469-1777 bp Feature: gene Location: 2393-2620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010001232.1 Moorea sp. SIO3I7 3I7_NODE_1232, whole genome shotgun sequence (2563 bp)
Overview 1 RT 1: 1257-2554 bp Neighborhood of RT #1 [1257, 2562] DDE_Tnp_ISAZ013 RVT-GII Feature: gene Location: 1257-1649 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 1296-1602 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 1296-1602 bp Feature: gene Location: 1886-2074 bp Feature: gene Location: 2107-2562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2176-2554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2176-2554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII

Seq: JAAHHV010000124.1 Moorea sp. SIO3I7 3I7_NODE_124, whole genome shotgun sequence (10134 bp)
Overview 1 RT 1: 299-5166 bp Neighborhood of RT #1 [299, 5171] RVT_N RVT-GII GIIM McrA TPR TPR TPR COG4995 Feature: gene Location: 299-1810 bp Feature: domain Description: RVT_N Location: 329-575 bp Feature: domain Description: RVT_N Location: 329-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626-1223 bp Feature: domain Description: GIIM Note: maturase Location: 1283-1469 bp Feature: domain Description: GIIM Note: maturase Location: 1283-14 69 bp Feature: domain Description: McrA Location: 1499-1784 bp Feature: domain Description: McrA Location: 14 99-1784 bp Feature: gene Location: 2071-2235 bp Feature: gene Location: 2292-5171 bp Feature: domain Description: TPR Location: 2433-2763 bp Feature: domain Description: TPR Location: 2433-2763 bp Feature: domain Description: TPR Location: 2814-3249 bp Feature: domain Description: TPR Location: 2814 -3249 bp Feature: domain Description: TPR Location: 3615-3840 bp Feature: domain Description: TPR Location: 3615-3840 bp Feature: domain Description: COG4995 Location: 3867-5166 bp Feature: domain Description: COG4995 Location: 3867-5166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), TPR (smart00028), COG4995 (Uncharacterized conserved protein, contains CHAT domain )

Seq: JAAHHV010001246.1 Moorea sp. SIO3I7 3I7_NODE_1246, whole genome shotgun sequence (2526 bp)
Overview 1 RT 1: 151-2388 bp Neighborhood of RT #1 [151, 2388] RVT_N RVT-GII GIIM HNH Feature: gene Location: 151-1851 bp Feature: domain Description: RVT_N Location: 196-442 bp Feature: domain Description: RVT_N Location: 196-442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-115 3 bp Feature: domain Description: GIIM Note: maturase Location: 1243-1465 bp Feature: domain Description: GIIM Note: maturase Location: 1243-1465 bp Feature: domain Description: HNH Note: nucleases Location: 1675-1807 bp Feature: domain Description: HNH Note: nucleases Location: 1675-1807 bp Feature: gene Location: 2203-2388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHV010001252.1 Moorea sp. SIO3I7 3I7_NODE_1252, whole genome shotgun sequence (2521 bp)
Overview 1 RT 1: 197-2380 bp Neighborhood of RT #1 [197, 2380] RVT_N RVT-GII GIIM HNH Feature: gene Location: 197-1960 bp Feature: domain Description: RVT_N Location: 242-488 bp Feature: domain Description: RVT_N Location: 242-488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 530-1199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 530-1199 bp Feature: domain Description: GIIM Note: maturase Location: 1277-1511 bp Feature: domain Description: GIIM Note: maturase Location: 1277-1511 bp Feature: domain Description: HNH Note: nucleases Location: 1757-1889 bp Feature: domain Description: HNH Note: nucleases Location: 1757-1889 bp Feature: gene Location: 2219-2380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHV010001281.1 Moorea sp. SIO3I7 3I7_NODE_1281, whole genome shotgun sequence (2489 bp)
Overview 1 RT 1: 672-2250 bp Neighborhood of RT #1 [672, 2276] RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 672-1580 bp Feature: domain Description: RVT_N Location: 696-942 bp Feature: domain Description: RVT_N Location: 696-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1422-1578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1422-1578 bp Feature: gene Location: 1896-2276 bp Feature: domain Description: McrA Location: 1944-2250 bp Feature: domain Description: McrA Location: 1944-2250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHV010001284.1 Moorea sp. SIO3I7 3I7_NODE_1284, whole genome shotgun sequence (2483 bp)
Overview 1 RT 1: 16-2482 bp Neighborhood of RT #1 [16, 2482] RVT-GII GIIM McrA RVT_N Feature: gene Location: 16-177 bp Feature: gene Location: 380-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-905 bp Feature: domain Description: GIIM Note: maturase Location: 962-1163 bp Feature: domain Description: GIIM Note: maturase Location: 962-1163 bp Feature: domain Description: McrA Location: 1181-1463 bp Feature: domain Description: McrA Location: 118 1-1463 bp Feature: gene Location: 1696-1890 bp Feature: domain Description: RVT_N Location: 1720-1837 bp Feature: domain Description: RVT_N Location: 1720-18 37 bp Feature: gene Location: 2309-2482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHV010001289.1 Moorea sp. SIO3I7 3I7_NODE_1289, whole genome shotgun sequence (2465 bp)
Overview 1 RT 1: 522-2229 bp Neighborhood of RT #1 [522, 2357] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 522-2357 bp Feature: domain Description: RVT_N Location: 585-831 bp Feature: domain Description: RVT_N Location: 585-831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1551 bp Feature: domain Description: YkfC Location: 1704-1857 bp Feature: domain Description: YkfC Location: 1704-1857 bp Feature: domain Description: HNHc Note: nucleases Location: 2064-2229 bp Feature: domain Description: HNHc Note: nucleases Location: 2064-2229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: JAAHHV010001313.1 Moorea sp. SIO3I7 3I7_NODE_1313, whole genome shotgun sequence (2427 bp)
Overview 1 RT 1: 162-2425 bp Neighborhood of RT #1 [162, 2425] RVT_N RVT-GII GIIM McrA Feature: gene Location: 162-1871 bp Feature: domain Description: RVT_N Location: 207-453 bp Feature: domain Description: RVT_N Location: 20 7-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1146 bp Feature: domain Description: GIIM Note: maturase Location: 1233-1458 bp Feature: domain Description: GIIM Note: maturase Location: 1233-1458 bp Feature: domain Description: McrA Location: 1536-1851 bp Feature: domain Description: McrA Location: 1536-1851 bp Feature: gene Location: 2103-2258 bp Feature: gene Location: 2261-2425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001372.1 Moorea sp. SIO3I7 3I7_NODE_1372, whole genome shotgun sequence (2338 bp)
Overview 1 RT 1: 243-2237 bp Neighborhood of RT #1 [243, 2335] RVT_N RVT-GII RVT-GII GIIM McrA ChanN-like Feature: gene Location: 243-1745 bp Feature: domain Description: RVT_N Location: 270-516 bp Feature: domain Description: RVT_N Location: 270-516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1161 bp Feature: domain Description: GIIM Note: maturase Location: 1218-1389 bp Feature: domain Description: GIIM Note: maturase Location: 121 8-1389 bp Feature: domain Description: McrA Location: 1413-1719 bp Feature: domain Description: McrA Location: 1413-1719 bp Feature: gene Location: 2075-2335 bp Feature: domain Description: ChanN-like Location: 2081-2237 bp Feature: domain Description: ChanN-like Location: 2081-2237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), ChanN-like (cd14727)

Seq: JAAHHV010001391.1 Moorea sp. SIO3I7 3I7_NODE_1391, whole genome shotgun sequence (2323 bp)
Overview 1 RT 1: 27-2188 bp Neighborhood of RT #1 [27, 2223] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 27-266 bp Feature: gene Location: 475-2223 bp Feature: domain Description: RVT_N Location: 520-766 bp Feature: domain Description: RVT_N Location: 520-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1507 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1840 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1840 bp Feature: domain Description: HNHc Note: nucleases Location: 2029-2188 bp Feature: domain Description: HNHc Note: nucleases Location: 2029-2188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010001395.1 Moorea sp. SIO3I7 3I7_NODE_1395, whole genome shotgun sequence (2320 bp)
Overview 1 RT 1: 121-2223 bp Neighborhood of RT #1 [121, 2267] RVT_N RVT-GII GIIM HNH Feature: gene Location: 121-303 bp Feature: gene Location: 567-2267 bp Feature: domain Description: RVT_N Location: 612-858 bp Feature: domain Description: RVT_N Location: 612-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 900-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 900-1569 bp Feature: domain Description: GIIM Note: maturase Location: 1653-1881 bp Feature: domain Description: GIIM Note: maturase Location: 1653-1881 bp Feature: domain Description: HNH Note: nucleases Location: 2091-2223 bp Feature: domain Description: HNH Note: nucleases Location: 2091-2223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHV010001417.1 Moorea sp. SIO3I7 3I7_NODE_1417, whole genome shotgun sequence (2280 bp)
Overview 1 RT 1: 108-2210 bp Neighborhood of RT #1 [108, 2210] RVT_N RVT-GII GIIM McrA Feature: gene Location: 108-1790 bp Feature: domain Description: RVT_N Location: 150-396 bp Feature: domain Description: RVT_N Location: 150-396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1089 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1401 bp Feature: domain Description: GIIM Note: maturase Location: 1176-1401 bp Feature: domain Description: McrA Location: 1449-1752 bp Feature: domain Description: McrA Location: 1449-1752 bp Feature: gene Location: 1941-2210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001419.1 Moorea sp. SIO3I7 3I7_NODE_1419, whole genome shotgun sequence (2277 bp)
Overview 1 RT 1: 31-1501 bp Neighborhood of RT #1 [31, 1539] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 31-1539 bp Feature: domain Description: RVT_N Location: 55-301 bp Feature: domain Description: RVT_N Location: 55-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778-946 bp Feature: domain Description: GIIM Note: maturase Location: 1003-1168 bp Feature: domain Description: GIIM Note: maturase Location: 1003-1168 bp Feature: domain Description: McrA Location: 1180-1501 bp Feature: domain Description: McrA Location: 1180-1501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001439.1 Moorea sp. SIO3I7 3I7_NODE_1439, whole genome shotgun sequence (2250 bp)
Overview 1 RT 1: 254-1762 bp Neighborhood of RT #1 [254, 1854] RVT-GII RVT-GII GIIM McrA RVT_N Feature: gene Location: 254-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 0-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 659-824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 659-824 bp Feature: domain Description: GIIM Note: maturase Location: 881-1067 bp Feature: domain Description: GIIM Note: maturase Location: 881-1067 bp Feature: domain Description: McrA Location: 1082-1382 bp Feature: domain Description: McrA Location: 1082-1382 bp Feature: gene Location: 1501-1854 bp Feature: domain Description: RVT_N Location: 1522-1762 bp Feature: domain Description: RVT_N Location: 1522-1762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHV010001483.1 Moorea sp. SIO3I7 3I7_NODE_1483, whole genome shotgun sequence (2174 bp)
Overview 1 RT 1: 520-2062 bp Neighborhood of RT #1 [520, 2097] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 520-2097 bp Feature: domain Description: RVT_N Location: 613-859 bp Feature: domain Description: RVT_N Location: 613-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910-1336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 910-1336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1339-1504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1339-1504 bp Feature: domain Description: GIIM Note: maturase Location: 1561-1756 bp Feature: domain Description: GIIM Note: maturase Location: 1561-1756 bp Feature: domain Description: McrA Location: 1780-2062 bp Feature: domain Description: McrA Location: 1780-2062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001485.1 Moorea sp. SIO3I7 3I7_NODE_1485, whole genome shotgun sequence (2172 bp)
Overview 1 RT 1: 217-2059 bp Neighborhood of RT #1 [217, 2094] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 217-354 bp Feature: gene Location: 586-2094 bp Feature: domain Description: RVT_N Location: 610-856 bp Feature: domain Description: RVT_N Location: 610-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336-1501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336-1501 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1747 bp Feature: domain Description: GIIM Note: maturase Location: 1558-1747 bp Feature: domain Description: McrA Location: 1753-2059 bp Feature: domain Description: McrA Location: 1753-2059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001607.1 Moorea sp. SIO3I7 3I7_NODE_1607, whole genome shotgun sequence (2039 bp)
Overview 1 RT 1: 214-1858 bp Neighborhood of RT #1 [214, 1899] RVT_N RVT-GII GIIM McrA Feature: gene Location: 214-1899 bp Feature: domain Description: RVT_N Location: 259-505 bp Feature: domain Description: RVT_N Location: 259-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 547-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 547-1198 bp Feature: domain Description: GIIM Note: maturase Location: 1285-1510 bp Feature: domain Description: GIIM Note: maturase Location: 1285-1510 bp Feature: domain Description: McrA Location: 1567-1858 bp Feature: domain Description: McrA Location: 1567-1858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010000165.1 Moorea sp. SIO3I7 3I7_NODE_165, whole genome shotgun sequence (8987 bp)
Overview 1 RT 1: 1867-6325 bp Neighborhood of RT #1 [1867, 6483] TPR TPR TPR InsQ RVT_N RVT-GII GIIM McrA HTH_OrfB_IS605 Feature: gene Location: 1867-2688 bp Feature: domain Description: TPR Location: 1990-2167 bp Feature: domain Description: TPR Location: 1990-2167 bp Feature: domain Description: TPR Location: 2209-2299 bp Feature: domain Description: TPR Location: 2209-2299 bp Feature: domain Description: TPR Location: 2341-2584 bp Feature: domain Description: TPR Location: 2341-2584 bp Feature: gene Location: 2925-3686 bp Feature: domain Description: InsQ Location: 2940-3666 bp Feature: domain Description: InsQ Location: 2940-3666 bp Feature: gene Location: 3962-5659 bp Feature: domain Description: RVT_N Location: 4019-4265 bp Feature: domain Description: RVT_N Location: 4019-4265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4307-4958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430 7-4958 bp Feature: domain Description: GIIM Note: maturase Location: 5036-5270 bp Feature: domain Description: GIIM Note: maturase Location: 5036-5270 bp Feature: domain Description: McrA Location: 5327-5621 bp Feature: domain Description: McrA Location: 5327-5621 bp Feature: gene Location: 5862-6095 bp Feature: gene Location: 6190-6483 bp Feature: domain Description: HTH_OrfB_IS605 Location: 6193-6325 bp Feature: domain Description: HTH_OrfB_IS605 Location: 6193-6325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HTH_OrfB_IS605 (pfam12323)

Seq: JAAHHV010001663.1 Moorea sp. SIO3I7 3I7_NODE_1663, whole genome shotgun sequence (1996 bp)
Overview 1 RT 1: 286-1685 bp Neighborhood of RT #1 [286, 1711] RVT-GII RVT-GII group_II_RT_mat HNHc Feature: gene Location: 286-597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-595 bp Feature: gene Location: 647-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 671-890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 671-890 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1016-1265 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1016-1265 bp Feature: domain Description: HNHc Note: nucleases Location: 1523-1685 bp Feature: domain Description: HNHc Note: nucleases Location: 1523-1685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHV010001674.1 Moorea sp. SIO3I7 3I7_NODE_1674, whole genome shotgun sequence (1983 bp)
Overview 1 RT 1: 119-1664 bp Neighborhood of RT #1 [119, 1675] RVT_N RVT-GII GIIM McrA Feature: gene Location: 119-1675 bp Feature: domain Description: RVT_N Location: 212-458 bp Feature: domain Description: RVT_N Location: 212-458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509-1109 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1343 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1343 bp Feature: domain Description: McrA Location: 1364-1664 bp Feature: domain Description: McrA Location: 1364-1664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001684.1 Moorea sp. SIO3I7 3I7_NODE_1684, whole genome shotgun sequence (1975 bp)
Overview 1 RT 1: 392-1794 bp Neighborhood of RT #1 [392, 1973] RVT-UG4 Feature: gene Location: 392-601 bp Feature: gene Location: 843-1973 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1317-1794 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1317-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JAAHHV010001704.1 Moorea sp. SIO3I7 3I7_NODE_1704, whole genome shotgun sequence (1956 bp)
Overview 1 RT 1: 298-1783 bp Neighborhood of RT #1 [298, 1809] RVT_N RVT-GII GIIM McrA Feature: gene Location: 298-1809 bp Feature: domain Description: RVT_N Location: 325-571 bp Feature: domain Description: RVT_N Location: 325-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-1225 bp Feature: domain Description: GIIM Note: maturase Location: 1282-1462 bp Feature: domain Description: GIIM Note: maturase Location: 1282-1462 bp Feature: domain Description: McrA Location: 1495-1783 bp Feature: domain Description: McrA Location: 1495-1783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001709.1 Moorea sp. SIO3I7 3I7_NODE_1709, whole genome shotgun sequence (1951 bp)
Overview 1 RT 1: 95-1787 bp Neighborhood of RT #1 [95, 1789] McrA RVT_N RVT-GII Feature: gene Location: 95-511 bp Feature: domain Description: McrA Location: 191-479 bp Feature: domain Description: McrA Location: 191-479 bp Feature: gene Location: 797-1789 bp Feature: domain Description: RVT_N Location: 905-1151 bp Feature: domain Description: RVT_N Location: 905-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1202-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1202-1787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010001768.1 Moorea sp. SIO3I7 3I7_NODE_1768, whole genome shotgun sequence (1878 bp)
Overview 1 RT 1: 2-1877 bp Neighborhood of RT #1 [2, 1876] Tnp_DNA_bind RVT-UG4 Feature: gene Location: 2-466 bp Feature: domain Description: Tnp_DNA_bind Location: 8-89 bp Feature: domain Description: Tnp_DNA_bind Location: 8-89 bp Feature: gene Location: 1190-1876 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1538-1877 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1538-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_DNA_bind (pfam14706), RVT-UG4

Seq: JAAHHV010001779.1 Moorea sp. SIO3I7 3I7_NODE_1779, whole genome shotgun sequence (1869 bp)
Overview 1 RT 1: 151-1864 bp Neighborhood of RT #1 [151, 1866] RVT-GII group_II_RT_mat HNHc RVT-GII Feature: gene Location: 151-288 bp Feature: gene Location: 302-457 bp Feature: gene Location: 516-1505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-684 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 816-1059 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 816-1059 bp Feature: domain Description: HNHc Note: nucleases Location: 1317-1479 bp Feature: domain Description: HNHc Note: nucleases Location: 1317-1479 bp Feature: gene Location: 1630-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1633-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1633-1864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHV010001874.1 Moorea sp. SIO3I7 3I7_NODE_1874, whole genome shotgun sequence (1776 bp)
Overview 1 RT 1: 29-1263 bp Neighborhood of RT #1 [29, 1466] OrfB_Zn_ribbon HNH RVT-GII GIIM Feature: gene Location: 29-280 bp Feature: domain Description: OrfB_Zn_ribbon Location: 35-170 bp Feature: domain Description: OrfB_Zn_ribbon Location: 35-170 bp Feature: gene Location: 435-575 bp Feature: domain Description: HNH Note: nucleases Location: 441-531 bp Feature: domain Description: HNH Note: nucleases Location: 441-531 bp Feature: gene Location: 621-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-951 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1263 bp Feature: domain Description: GIIM Note: maturase Location: 1038 -1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OrfB_Zn_ribbon (pfam07282), HNH (pfam01844), RVT-GII, GIIM (pfam08388)

Seq: JAAHHV010001876.1 Moorea sp. SIO3I7 3I7_NODE_1876, whole genome shotgun sequence (1776 bp)
Overview 1 RT 1: 3-1479 bp Neighborhood of RT #1 [3, 1517] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 3-1517 bp Feature: domain Description: RVT_N Location: 30-276 bp Feature: domain Description: RVT_N Location: 30-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327-750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327-750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756-921 bp Feature: domain Description: GIIM Note: maturase Location: 978-1134 bp Feature: domain Description: GIIM Note: maturase Location: 978-1134 bp Feature: domain Description: McrA Location: 1194-1479 bp Feature: domain Description: McrA Location: 1194-1479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001891.1 Moorea sp. SIO3I7 3I7_NODE_1891, whole genome shotgun sequence (1764 bp)
Overview 1 RT 1: 218-1724 bp Neighborhood of RT #1 [218, 1762] RVT_N RVT-GII GIIM McrA Feature: gene Location: 218-1762 bp Feature: domain Description: RVT_N Location: 224-338 bp Feature: domain Description: RVT_N Location: 224-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1031 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1343 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1343 bp Feature: domain Description: McrA Location: 1451-1724 bp Feature: domain Description: McrA Location: 1451-1724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001900.1 Moorea sp. SIO3I7 3I7_NODE_1900, whole genome shotgun sequence (1756 bp)
Overview 1 RT 1: 179-1574 bp Neighborhood of RT #1 [179, 1609] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 179-1609 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1016 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1253 bp Feature: domain Description: McrA Location: 1283-1574 bp Feature: domain Description: McrA Location: 1283-1574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010001922.1 Moorea sp. SIO3I7 3I7_NODE_1922, whole genome shotgun sequence (1735 bp)
Overview 1 RT 1: 730-1639 bp Neighborhood of RT #1 [730, 1641] RVT_N RVT-GII Feature: gene Location: 730-1641 bp Feature: domain Description: RVT_N Location: 757-1003 bp Feature: domain Description: RVT_N Location: 757-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010001946.1 Moorea sp. SIO3I7 3I7_NODE_1946, whole genome shotgun sequence (1717 bp)
Overview 1 RT 1: 1-1605 bp Neighborhood of RT #1 [1, 1664] InsQ RVT-GII GIIM McrA Feature: gene Location: 1-195 bp Feature: domain Description: InsQ Location: 73-196 bp Feature: domain Description: InsQ Location: 73-196 bp Feature: gene Location: 354-1664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-903 bp Feature: domain Description: GIIM Note: maturase Location: 981-1215 bp Feature: domain Description: GIIM Note: maturase Location: 981-1215 bp Feature: domain Description: McrA Location: 1332-1605 bp Feature: domain Description: McrA Location: 1332-1605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010002008.1 Moorea sp. SIO3I7 3I7_NODE_2008, whole genome shotgun sequence (1664 bp)
Overview 1 RT 1: 2-1573 bp Neighborhood of RT #1 [2, 1573] RVT-GII group_II_RT_mat HNHc Feature: gene Location: 2-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-305 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 440-680 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 44 0-680 bp Feature: domain Description: HNHc Note: nucleases Location: 938-1097 bp Feature: domain Description: HNHc Note: nucleases Location: 938-1097 bp Feature: gene Location: 1301-1573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHV010002017.1 Moorea sp. SIO3I7 3I7_NODE_2017, whole genome shotgun sequence (1656 bp)
Overview 1 RT 1: 1-1462 bp Neighborhood of RT #1 [1, 1503] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1-1503 bp Feature: domain Description: RVT_N Location: 13-259 bp Feature: domain Description: RVT_N Location: 13-259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310-733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310-733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-904 bp Feature: domain Description: GIIM Note: maturase Location: 967-1105 bp Feature: domain Description: GIIM Note: maturase Location: 967-1105 bp Feature: domain Description: McrA Location: 1189-1462 bp Feature: domain Description: McrA Location: 1189-1462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010002121.1 Moorea sp. SIO3I7 3I7_NODE_2121, whole genome shotgun sequence (1579 bp)
Overview 1 RT 1: 1-1468 bp Neighborhood of RT #1 [1, 1578] RVT-GII GIIM HNH excise Feature: gene Location: 1-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-124 bp Feature: domain Description: GIIM Note: maturase Location: 205-436 bp Feature: domain Description: GIIM Note: maturase Location: 205-436 bp Feature: domain Description: HNH Note: nucleases Location: 646-781 bp Feature: domain Description: HNH Note: nucleases Location: 646 -781 bp Feature: gene Location: 1019-1309 bp Feature: gene Location: 1342-1578 bp Feature: domain Description: excise Location: 1363-1468 bp Feature: domain Description: excise Location: 1363-146 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), excise (TIGR01764)

Seq: JAAHHV010002124.1 Moorea sp. SIO3I7 3I7_NODE_2124, whole genome shotgun sequence (1575 bp)
Overview 1 RT 1: 2-978 bp Neighborhood of RT #1 [2, 989] RVT-GII RVT_N RVT-GII Feature: gene Location: 2-334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-332 bp Feature: gene Location: 561-989 bp Feature: domain Description: RVT_N Location: 606-852 bp Feature: domain Description: RVT_N Location: 606-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894-978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894-978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655)

Seq: JAAHHV010002151.1 Moorea sp. SIO3I7 3I7_NODE_2151, whole genome shotgun sequence (1554 bp)
Overview 1 RT 1: 3-1517 bp Neighborhood of RT #1 [3, 1552] RVT_N RVT-GII GIIM McrA Feature: gene Location: 3-428 bp Feature: domain Description: RVT_N Location: 48-294 bp Feature: domain Description: RVT_N Location: 48 -294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-429 bp Feature: gene Location: 1055-1552 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1205 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1205 bp Feature: domain Description: McrA Location: 1211-1517 bp Feature: domain Description: McrA Location: 1211-1517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010002237.1 Moorea sp. SIO3I7 3I7_NODE_2237, whole genome shotgun sequence (1496 bp)
Overview 1 RT 1: 3-1374 bp Neighborhood of RT #1 [3, 1430] RVT_N RVT-GII Feature: gene Location: 3-143 bp Feature: gene Location: 717-1430 bp Feature: domain Description: RVT_N Location: 741-987 bp Feature: domain Description: RVT_N Location: 741-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010002238.1 Moorea sp. SIO3I7 3I7_NODE_2238, whole genome shotgun sequence (1496 bp)
Overview 1 RT 1: 184-1468 bp Neighborhood of RT #1 [184, 1494] RVT-GII GIIM McrA Feature: gene Location: 184-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-910 bp Feature: domain Description: GIIM Note: maturase Location: 967-1156 bp Feature: domain Description: GIIM Note: maturase Location: 967-1156 bp Feature: domain Description: McrA Location: 1168-1468 bp Feature: domain Description: McrA Location: 1168-1468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010002240.1 Moorea sp. SIO3I7 3I7_NODE_2240, whole genome shotgun sequence (1495 bp)
Overview 1 RT 1: 2-1490 bp Neighborhood of RT #1 [2, 1492] RVT_N RVT-GII HPPD_N_like Feature: gene Location: 2-475 bp Feature: domain Description: RVT_N Location: 47-293 bp Feature: domain Description: RVT_N Location: 47-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-476 bp Feature: gene Location: 1120-1323 bp Feature: gene Location: 1328-1492 bp Feature: domain Description: HPPD_N_like Location: 1346-1490 bp Feature: domain Description: HPPD_N_like Location: 1346-1490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HPPD_N_like (cd08342)

Seq: JAAHHV010002304.1 Moorea sp. SIO3I7 3I7_NODE_2304, whole genome shotgun sequence (1456 bp)
Overview 1 RT 1: 236-1452 bp Neighborhood of RT #1 [236, 1454] GIIM McrA RVT-GII Feature: gene Location: 236-442 bp Feature: gene Location: 522-1091 bp Feature: domain Description: GIIM Note: maturase Location: 537-687 bp Feature: domain Description: GIIM Note: maturase Location: 537-687 bp Feature: domain Description: McrA Location: 720-999 bp Feature: domain Description: McrA Location: 720-999 bp Feature: gene Location: 1284-1454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1290-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1290-1452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), McrA (COG4058), RVT-GII

Seq: JAAHHV010002317.1 Moorea sp. SIO3I7 3I7_NODE_2317, whole genome shotgun sequence (1447 bp)
Overview 1 RT 1: 124-1446 bp Neighborhood of RT #1 [124, 1446] RVT_N RVT-GII Feature: gene Location: 124-657 bp Feature: domain Description: RVT_N Location: 160-406 bp Feature: domain Description: RVT_N Location: 160-406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448-655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448-655 bp Feature: gene Location: 1216-1446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010002360.1 Moorea sp. SIO3I7 3I7_NODE_2360, whole genome shotgun sequence (1415 bp)
Overview 1 RT 1: 37-1389 bp Neighborhood of RT #1 [37, 1412] RVT-GII GIIM HNHc tspaseT_teng_C Feature: gene Location: 37-1128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-382 bp Feature: domain Description: GIIM Note: maturase Location: 460-694 bp Feature: domain Description: GIIM Note: maturase Location: 460-694 bp Feature: domain Description: HNHc Note: nucleases Location: 910-1063 bp Feature: domain Description: HNHc Note: nucleases Location: 910-1063 bp Feature: gene Location: 1266-1412 bp Feature: domain Description: tspaseT_teng_C Location: 1272-1389 bp Feature: domain Description: tspaseT_teng_C Location: 1272-1389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), tspaseT_teng_C (TIGR01766)

Seq: JAAHHV010002443.1 Moorea sp. SIO3I7 3I7_NODE_2443, whole genome shotgun sequence (1364 bp)
Overview 1 RT 1: 3-1176 bp Neighborhood of RT #1 [3, 1202] RVT-GII RVT-GII GIIM McrA Feature: gene Location: 3-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-618 bp Feature: domain Description: GIIM Note: maturase Location: 675-861 bp Feature: domain Description: GIIM Note: maturase Location: 675-861 bp Feature: domain Description: McrA Location: 879-1176 bp Feature: domain Description: McrA Location: 879-1176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010002539.1 Moorea sp. SIO3I7 3I7_NODE_2539, whole genome shotgun sequence (1310 bp)
Overview 1 RT 1: 1-1216 bp Neighborhood of RT #1 [1, 1224] InsQ RVT_N RVT-GII Feature: gene Location: 1-318 bp Feature: domain Description: InsQ Location: 4-187 bp Feature: domain Description: InsQ Location: 4-187 bp Feature: gene Location: 742-1224 bp Feature: domain Description: RVT_N Location: 781-1027 bp Feature: domain Description: RVT_N Location: 781-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1069-1216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1069-1216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010002578.1 Moorea sp. SIO3I7 3I7_NODE_2578, whole genome shotgun sequence (1287 bp)
Overview 1 RT 1: 2-1284 bp Neighborhood of RT #1 [2, 1284] RVT-GII GIIM McrA Feature: gene Location: 2-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-107 bp Feature: domain Description: GIIM Note: maturase Location: 164-356 bp Feature: domain Description: GIIM Note: maturase Location: 164-356 bp Feature: domain Description: McrA Location: 371-665 bp Feature: domain Description: McrA Location: 371-665 bp Feature: gene Location: 985-1284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010000027.1 Moorea sp. SIO3I7 3I7_NODE_27, whole genome shotgun sequence (25444 bp)
Overview 1 RT 1: 21230-25419 bp Neighborhood of RT #1 [21230, 25442] TIGR00275 McrA RVT_N RVT-GII GIIM PDI_a_MPD1_like Feature: gene Location: 21230-22507 bp Feature: domain Description: TIGR00275 Location: 21260-22490 bp Feature: domain Description: TIGR00275 Location: 21260-22490 bp Feature: gene Location: 22791-23153 bp Feature: domain Description: McrA Location: 22818-23133 bp Feature: domain Description: McrA Location: 22818-23133 bp Feature: gene Location: 23198-24502 bp Feature: domain Description: RVT_N Location: 23243-23489 bp Feature: domain Description: RVT_N Location: 23243-23489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23531-24182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23531-24182 bp Feature: domain Description: GIIM Note: maturase Location: 24263-24413 bp Feature: domain Description: GIIM Note: maturase Location: 24263-24413 bp Feature: gene Location: 24793-25002 bp Feature: gene Location: 25170-25442 bp Feature: domain Description: PDI_a_MPD1_like Location: 25179-25419 bp Feature: domain Description: PDI_a_MPD1_like Location: 25179-25419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00275 (flavoprotein, HI0933 family), McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PDI_a_MPD1_like (cd03002)

Seq: JAAHHV010000279.1 Moorea sp. SIO3I7 3I7_NODE_279, whole genome shotgun sequence (7036 bp)
Overview 1 RT 1: 4063-6997 bp Neighborhood of RT #1 [4063, 6997] ABC_6TM_HetC_like McrA RVT_N RVT-GII GIIM Feature: gene Location: 4063-4395 bp Feature: domain Description: ABC_6TM_HetC_like Location: 4066-4336 bp Feature: domain Description: ABC_6TM_HetC_like Location: 4066-4336 bp Feature: gene Location: 4544-4909 bp Feature: domain Description: McrA Location: 4601-4868 bp Feature: domain Description: McrA Location: 4601-4868 bp Feature: gene Location: 4991-6244 bp Feature: domain Description: RVT_N Location: 5027-5273 bp Feature: domain Description: RVT_N Location: 5027-5273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5315-5966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5315-59 66 bp Feature: domain Description: GIIM Note: maturase Location: 6050-6188 bp Feature: domain Description: GIIM Note: maturase Location: 6050-6188 bp Feature: gene Location: 6485-6670 bp Feature: gene Location: 6821-6997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_6TM_HetC_like (cd18568), McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHV010002821.1 Moorea sp. SIO3I7 3I7_NODE_2821, whole genome shotgun sequence (1154 bp)
Overview 1 RT 1: 3-664 bp Neighborhood of RT #1 [3, 720] RVT-GII RVT_N RVT-GII Feature: gene Location: 3-209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27-210 bp Feature: gene Location: 256-720 bp Feature: domain Description: RVT_N Location: 292-535 bp Feature: domain Description: RVT_N Location: 292-535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589-664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589-664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655)

Seq: JAAHHV010002846.1 Moorea sp. SIO3I7 3I7_NODE_2846, whole genome shotgun sequence (1141 bp)
Overview 1 RT 1: 232-1105 bp Neighborhood of RT #1 [232, 1140] RVT-GII RVT-GII McrA Feature: gene Location: 232-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-547 bp Feature: domain Description: McrA Location: 802-1105 bp Feature: domain Description: McrA Location: 802-1105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058)

Seq: JAAHHV010000029.1 Moorea sp. SIO3I7 3I7_NODE_29, whole genome shotgun sequence (21464 bp)
Overview 1 RT 1: 3898-9081 bp Neighborhood of RT #1 [3898, 9131] TPR TPR RVT_N RVT-GII RVT-GII GIIM McrA Phosphodiest Feature: gene Location: 3898-4554 bp Feature: domain Description: TPR Location: 3928-4198 bp Feature: domain Description: TPR Location: 3928-4198 bp Feature: domain Description: TPR Location: 4363-4450 bp Feature: domain Description: TPR Location: 4363-4450 bp Feature: gene Location: 4711-4875 bp Feature: gene Location: 5150-6661 bp Feature: domain Description: RVT_N Location: 5174-5420 bp Feature: domain Description: RVT_N Location: 5174-5420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5471-5897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5471-5897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5900-6065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5900-6065 bp Feature: domain Description: GIIM Note: maturase Location: 6122-6287 bp Feature: domain Description: GIIM Note: maturase Location: 6122-62 87 bp Feature: domain Description: McrA Location: 6338-6623 bp Feature: domain Description: McrA Location: 6338-662 3 bp Feature: gene Location: 6725-7348 bp Feature: gene Location: 7857-9131 bp Feature: domain Description: Phosphodiest Location: 8046-9081 bp Feature: domain Description: Phosphodiest Location: 8046-9081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Phosphodiest (pfam01663)

Seq: JAAHHV010002932.1 Moorea sp. SIO3I7 3I7_NODE_2932, whole genome shotgun sequence (1103 bp)
Overview 1 RT 1: 1-1096 bp Neighborhood of RT #1 [1, 1101] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 1-1101 bp Feature: domain Description: RVT_N Location: 40-286 bp Feature: domain Description: RVT_N Location: 40-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 766-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 766-931 bp Feature: domain Description: GIIM Note: maturase Location: 988-1096 bp Feature: domain Description: GIIM Note: maturase Location: 988-1096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHV010002934.1 Moorea sp. SIO3I7 3I7_NODE_2934, whole genome shotgun sequence (1049 bp)
Overview 1 RT 1: 2-1006 bp Neighborhood of RT #1 [2, 1047] RVT-GII GIIM McrA Feature: gene Location: 2-142 bp Feature: gene Location: 274-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-451 bp Feature: domain Description: GIIM Note: maturase Location: 508-694 bp Feature: domain Description: GIIM Note: maturase Location: 508-694 bp Feature: domain Description: McrA Location: 703-1006 bp Feature: domain Description: McrA Location: 703-1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010000299.1 Moorea sp. SIO3I7 3I7_NODE_299, whole genome shotgun sequence (6702 bp)
Overview 1 RT 1: 148-3769 bp Neighborhood of RT #1 [148, 3879] RVT_N RVT-GII GIIM McrA Y1_Tnp MATE_like_2 Feature: gene Location: 148-1671 bp Feature: domain Description: RVT_N Location: 187-433 bp Feature: domain Description: RVT_N Location: 187-433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1087 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1324 bp Feature: domain Description: GIIM Note: maturase Location: 1144-1324 bp Feature: domain Description: McrA Location: 1357-1645 bp Feature: domain Description: McrA Location: 1357-1645 bp Feature: gene Location: 2326-2745 bp Feature: domain Description: Y1_Tnp Location: 2365-2731 bp Feature: domain Description: Y1_Tnp Location: 2365 -2731 bp Feature: gene Location: 2782-3879 bp Feature: domain Description: MATE_like_2 Location: 2800-3769 bp Feature: domain Description: MATE_like_2 Location: 2800-3769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Y1_Tnp (pfam01797), MATE_like_2 (cd13149)

Seq: JAAHHV010000304.1 Moorea sp. SIO3I7 3I7_NODE_304, whole genome shotgun sequence (6617 bp)
Overview 1 RT 1: 1179-4719 bp Neighborhood of RT #1 [1179, 4719] RVT_N RVT-GII GIIM HNH Dam Feature: gene Location: 1179-1340 bp Feature: gene Location: 1367-1621 bp Feature: gene Location: 1627-3381 bp Feature: domain Description: RVT_N Location: 1672-1915 bp Feature: domain Description: RVT_N Location: 1672-1915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1960-2659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1960-2659 bp Feature: domain Description: GIIM Note: maturase Location: 2764-2992 bp Feature: domain Description: GIIM Note: maturase Location: 2764-2992 bp Feature: domain Description: HNH Note: nucleases Location: 3208-3343 bp Feature: domain Description: HNH Note: nucleases Location: 3208-3343 bp Feature: gene Location: 3556-4338 bp Feature: domain Description: Dam Location: 3559-4336 bp Feature: domain Description: Dam Location: 3559-4336 bp Feature: gene Location: 4555-4719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Dam (pfam05869)

Seq: JAAHHV010000330.1 Moorea sp. SIO3I7 3I7_NODE_330, whole genome shotgun sequence (6363 bp)
Overview 1 RT 1: 3-6361 bp Neighborhood of RT #1 [3, 6361] RVT-Retrons SWIM Feature: gene Location: 3-128 bp Feature: gene Location: 309-1721 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 855-1476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 855-1476 bp Feature: gene Location: 2165-3805 bp Feature: domain Description: SWIM Location: 3692-3776 bp Feature: domain Description: SWIM Location: 3692-3776 bp Feature: gene Location: 4157-6361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SWIM (pfam04434)

Seq: JAAHHV010000389.1 Moorea sp. SIO3I7 3I7_NODE_389, whole genome shotgun sequence (5711 bp)
Overview 1 RT 1: 2-5439 bp Neighborhood of RT #1 [2, 5439] Glyco_tranf_GTA_type InsQ RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 2-781 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 38-593 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 38-593 bp Feature: gene Location: 1428-2489 bp Feature: domain Description: InsQ Location: 1503-2484 bp Feature: domain Description: InsQ Location: 1503-2484 bp Feature: gene Location: 3055-3483 bp Feature: domain Description: RVT_N Location: 3100-3346 bp Feature: domain Description: RVT_N Location: 3100-3346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3388-3472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3388-3472 bp Feature: gene Location: 3578-4774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3584-4040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3584-4040 bp Feature: domain Description: GIIM Note: maturase Location: 4118-4352 bp Feature: domain Description: GIIM Note: maturase Location: 4118-4352 bp Feature: domain Description: McrA Location: 4466-4736 bp Feature: domain Description: McrA Location: 4466-4736 bp Feature: gene Location: 4966-5187 bp Feature: gene Location: 5224-5439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_tranf_GTA_type (cl11394), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHV010000555.1 Moorea sp. SIO3I7 3I7_NODE_555, whole genome shotgun sequence (4630 bp)
Overview 1 RT 1: 1760-4598 bp Neighborhood of RT #1 [1760, 4627] ggt GIIM HNHc RVT_N RVT-GII ggt Feature: gene Location: 1760-1915 bp Feature: domain Description: ggt Location: 1769-1913 bp Feature: domain Description: ggt Location: 1769 -1913 bp Feature: gene Location: 2056-2694 bp Feature: domain Description: GIIM Note: maturase Location: 2068-2272 bp Feature: domain Description: GIIM Note: maturase Location: 2068-2272 bp Feature: domain Description: HNHc Note: nucleases Location: 2479-2638 bp Feature: domain Description: HNHc Note: nucleases Location: 2479-2638 bp Feature: gene Location: 2609-3781 bp Feature: domain Description: RVT_N Location: 2654-2900 bp Feature: domain Description: RVT_N Location: 2654-2900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2942-3599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2942-3599 bp Feature: gene Location: 3977-4138 bp Feature: gene Location: 4334-4627 bp Feature: domain Description: ggt Location: 4337-4598 bp Feature: domain Description: ggt Location: 4337-4598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ggt (PRK09615), GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), RVT-GII

Seq: JAAHHV010000590.1 Moorea sp. SIO3I7 3I7_NODE_590, whole genome shotgun sequence (4475 bp)
Overview 1 RT 1: 179-1946 bp Neighborhood of RT #1 [179, 2212] RVT_N RVT-GII RVT-GII GIIM McrA DUF4096 Feature: gene Location: 179-1024 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: domain Description: RVT_N Location: 185-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-983 bp Feature: gene Location: 1122-1634 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1224 bp Feature: domain Description: GIIM Note: maturase Location: 1134-1224 bp Feature: domain Description: McrA Location: 1311-1596 bp Feature: domain Description: McrA Location: 1311-1596 bp Feature: gene Location: 1796-2212 bp Feature: domain Description: DUF4096 Location: 1835-1946 bp Feature: domain Description: DUF4096 Location: 1835-1946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF4096 (pfam13340)

Seq: JAAHHV010000641.1 Moorea sp. SIO3I7 3I7_NODE_641, whole genome shotgun sequence (4201 bp)
Overview 1 RT 1: 2-2432 bp Neighborhood of RT #1 [2, 2728] RVT_N RVT-GII GIIM McrA HNH COG5421 Feature: gene Location: 2-1465 bp Feature: domain Description: RVT_N Location: 5-83 bp Feature: domain Description: RVT_N Location: 5-83 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-776 bp Feature: domain Description: GIIM Note: maturase Location: 866-1088 bp Feature: domain Description: GIIM Note: maturase Location: 866-1088 bp Feature: domain Description: McrA Location: 1172-1445 bp Feature: domain Description: McrA Location: 1172-1445 bp Feature: gene Location: 1724-1966 bp Feature: domain Description: HNH Note: nucleases Location: 1790-1922 bp Feature: domain Description: HNH Note: nucleases Location: 1790-1922 bp Feature: gene Location: 2219-2728 bp Feature: domain Description: COG5421 Location: 2261-2432 bp Feature: domain Description: COG5421 Location: 2261-2432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNH (pfam01844), COG5421 (Transposase )

Seq: JAAHHV010000678.1 Moorea sp. SIO3I7 3I7_NODE_678, whole genome shotgun sequence (4078 bp)
Overview 1 RT 1: 551-4069 bp Neighborhood of RT #1 [551, 4077] RVT_N RVT-GII RVT-GII GIIM McrA InsQ Feature: gene Location: 551-2059 bp Feature: domain Description: RVT_N Location: 575-821 bp Feature: domain Description: RVT_N Location: 575-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872 -1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301-1466 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1700 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1700 bp Feature: domain Description: McrA Location: 1721-2024 bp Feature: domain Description: McrA Location: 172 1-2024 bp Feature: gene Location: 2668-4077 bp Feature: domain Description: InsQ Location: 2980-4069 bp Feature: domain Description: InsQ Location: 2980-4069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: JAAHHV010000692.1 Moorea sp. SIO3I7 3I7_NODE_692, whole genome shotgun sequence (4028 bp)
Overview 1 RT 1: 205-3485 bp Neighborhood of RT #1 [205, 3487] RVT_N RVT-GII RVT-GII GIIM McrA Uma2 Feature: gene Location: 205-1725 bp Feature: domain Description: RVT_N Location: 241-481 bp Feature: domain Description: RVT_N Location: 241-481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1132 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1342 bp Feature: domain Description: McrA Location: 1408-1687 bp Feature: domain Description: McrA Location: 1408-1687 bp Feature: gene Location: 2264-2659 bp Feature: gene Location: 2885-3487 bp Feature: domain Description: Uma2 Location: 2945-3485 bp Feature: domain Description: Uma2 Location: 2945-3485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Uma2 (pfam05685)

Seq: JAAHHV010000693.1 Moorea sp. SIO3I7 3I7_NODE_693, whole genome shotgun sequence (4026 bp)
Overview 1 RT 1: 1-2435 bp Neighborhood of RT #1 [1, 2458] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-273 bp Feature: gene Location: 622-1404 bp Feature: domain Description: RVT_N Location: 664-919 bp Feature: domain Description: RVT_N Location: 664-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1348 bp Feature: gene Location: 1552-1680 bp Feature: gene Location: 1709-2458 bp Feature: domain Description: GIIM Note: maturase Location: 1817-2054 bp Feature: domain Description: GIIM Note: maturase Location: 1817-2054 bp Feature: domain Description: HNHc Note: nucleases Location: 2273-2435 bp Feature: domain Description: HNHc Note: nucleases Location: 2273-2435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010000769.1 Moorea sp. SIO3I7 3I7_NODE_769, whole genome shotgun sequence (3665 bp)
Overview 1 RT 1: 98-3278 bp Neighborhood of RT #1 [98, 3286] RVT_N RVT-GII GIIM HNHc YgiN Feature: gene Location: 98-1942 bp Feature: domain Description: RVT_N Location: 158-404 bp Feature: domain Description: RVT_N Location: 158-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452-1124 bp Feature: domain Description: GIIM Note: maturase Location: 1196-1430 bp Feature: domain Description: GIIM Note: maturase Location: 1196-1430 bp Feature: domain Description: HNHc Note: nucleases Location: 1649-1811 bp Feature: domain Description: HNHc Note: nucleases Location: 1649-1811 bp Feature: gene Location: 2551-2787 bp Feature: gene Location: 2987-3286 bp Feature: domain Description: YgiN Location: 2999-3278 bp Feature: domain Description: YgiN Location: 2999-3278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YgiN (COG1359)

Seq: JAAHHV010000777.1 Moorea sp. SIO3I7 3I7_NODE_777, whole genome shotgun sequence (3656 bp)
Overview 1 RT 1: 1-3655 bp Neighborhood of RT #1 [1, 3654] InsQ RVT_N RVT-GII GIIM McrA STKc_PknB_like Feature: gene Location: 1-912 bp Feature: domain Description: InsQ Location: 16-892 bp Feature: domain Description: InsQ Location: 16-892 bp Feature: gene Location: 1489-3192 bp Feature: domain Description: RVT_N Location: 1528-1774 bp Feature: domain Description: RVT_N Location: 1528-1774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816-2467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816-2467 bp Feature: domain Description: GIIM Note: maturase Location: 2545-2779 bp Feature: domain Description: GIIM Note: maturase Location: 2545-2779 bp Feature: domain Description: McrA Location: 2872-3160 bp Feature: domain Description: McrA Location: 2872-3160 bp Feature: gene Location: 3523-3654 bp Feature: domain Description: STKc_PknB_like Location: 3550-3655 bp Feature: domain Description: STKc_PknB_like Location: 3550-3655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), STKc_PknB_like (cd14014)

Seq: JAAHHV010000887.1 Moorea sp. SIO3I7 3I7_NODE_887, whole genome shotgun sequence (3345 bp)
Overview 1 RT 1: 3-3096 bp Neighborhood of RT #1 [3, 3096] RVT-GII GIIM HNHc InsQ Feature: gene Location: 3-1517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39-711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39-711 bp Feature: domain Description: GIIM Note: maturase Location: 783-1017 bp Feature: domain Description: GIIM Note: maturase Location: 783-1017 bp Feature: domain Description: HNHc Note: nucleases Location: 1221-1377 bp Feature: domain Description: HNHc Note: nucleases Location: 1221-1377 bp Feature: gene Location: 1600-2865 bp Feature: domain Description: InsQ Location: 1672-2791 bp Feature: domain Description: InsQ Location: 1672-2791 bp Feature: gene Location: 2917-3096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHHV010000918.1 Moorea sp. SIO3I7 3I7_NODE_918, whole genome shotgun sequence (3249 bp)
Overview 1 RT 1: 3-3247 bp Neighborhood of RT #1 [3, 3247] ArfB RVT_N RVT-GII GIIM HNHc Feature: gene Location: 3-464 bp Feature: domain Description: ArfB Location: 12-459 bp Feature: domain Description: ArfB Location: 12-459 bp Feature: gene Location: 1270-3099 bp Feature: domain Description: RVT_N Location: 1333-1579 bp Feature: domain Description: RVT_N Location: 1333-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1627-2293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1627-2293 bp Feature: domain Description: GIIM Note: maturase Location: 2368-2599 bp Feature: domain Description: GIIM Note: maturase Location: 2368-2599 bp Feature: domain Description: HNHc Note: nucleases Location: 2806-2971 bp Feature: domain Description: HNHc Note: nucleases Location: 2806-2971 bp Feature: gene Location: 3101-3247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArfB (COG1402), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHV010000946.1 Moorea sp. SIO3I7 3I7_NODE_946, whole genome shotgun sequence (3182 bp)
Overview 1 RT 1: 376-2296 bp Neighborhood of RT #1 [376, 2343] RVT_N RVT-GII GIIM HNH Feature: gene Location: 376-546 bp Feature: gene Location: 667-2343 bp Feature: domain Description: RVT_N Location: 703-949 bp Feature: domain Description: RVT_N Location: 703-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 991-1642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 991-1642 bp Feature: domain Description: GIIM Note: maturase Location: 1720-1954 bp Feature: domain Description: GIIM Note: maturase Location: 1720-1954 bp Feature: domain Description: HNH Note: nucleases Location: 2164-2296 bp Feature: domain Description: HNH Note: nucleases Location: 2164-2296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHV010000948.1 Moorea sp. SIO3I7 3I7_NODE_948, whole genome shotgun sequence (3178 bp)
Overview 1 RT 1: 272-2407 bp Neighborhood of RT #1 [272, 2418] RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 272-448 bp Feature: gene Location: 711-1886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1158 bp Feature: domain Description: GIIM Note: maturase Location: 1245-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1245-1470 bp Feature: domain Description: McrA Location: 1524-1818 bp Feature: domain Description: McrA Location: 1524-1818 bp Feature: gene Location: 1996-2418 bp Feature: domain Description: RVT_N Location: 2035-2281 bp Feature: domain Description: RVT_N Location: 2035-2281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2323-2407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2323-2407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHV010000958.1 Moorea sp. SIO3I7 3I7_NODE_958, whole genome shotgun sequence (3151 bp)
Overview 1 RT 1: 295-3045 bp Neighborhood of RT #1 [295, 3149] cyclo_dehyd_2 cyclo_dehyd_2 RVT-GII GIIM McrA Feature: gene Location: 295-1710 bp Feature: domain Description: cyclo_dehyd_2 Location: 826-985 bp Feature: domain Description: cyclo_dehyd_2 Location: 826-985 bp Feature: domain Description: cyclo_dehyd_2 Location: 1147-1519 bp Feature: domain Description: cyclo_dehyd_2 Location: 1147-1519 bp Feature: gene Location: 2106-3149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2109-2487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2109-2487 bp Feature: domain Description: GIIM Note: maturase Location: 2544-2730 bp Feature: domain Description: GIIM Note: maturase Location: 2544-2730 bp Feature: domain Description: McrA Location: 2760-3045 bp Feature: domain Description: McrA Location: 2760-3045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyclo_dehyd_2 (TIGR03882), RVT-GII, GIIM (pfam08388), McrA (COG4058)