myRT

myRT report for GCA_010692445.1_ASM1069244v1

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Seq: JAAHHM010000123.1 Moorea sp. SIO3E8 3E8_NODE_123, whole genome shotgun sequence (18918 bp)
Overview 1 RT 1: 15025-18783 bp Neighborhood of RT #1 [15025, 18783] Haem_oxygenas_2 RVT-UG4 Feature: gene Location: 15025-15984 bp Feature: domain Description: Haem_oxygenas_2 Location: 15343-15910 bp Feature: domain Description: Haem_oxygenas_2 Location: 1 5343-1 591 0 bp Feature: gene Location: 16212-16616 bp Feature: gene Location: 17064-17939 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 17412-17865 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 741 2-1 7865 bp Feature: gene Location: 18289-18783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Haem_oxygenas_2 (pfam14518), RVT-UG4

Seq: JAAHHM010000157.1 Moorea sp. SIO3E8 3E8_NODE_157, whole genome shotgun sequence (13481 bp)
Overview 1 RT 1: 2657-13359 bp Neighborhood of RT #1 [2657, 13373] GIIM McrA RVT_N RVT-GII RVT_N RVT-GII RVT-GII GIIM McrA InsQ RVT_N RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII Feature: gene Location: 2657-3028 bp Feature: gene Location: 3717-4229 bp Feature: domain Description: GIIM Note: maturase Location: 3732-3882 bp Feature: domain Description: GIIM Note: maturase Location: 3732 -3882 bp Feature: domain Description: McrA Location: 3888-4194 bp Feature: domain Description: McrA Location: 3888-4194 bp Feature: gene Location: 4422-5333 bp Feature: domain Description: RVT_N Location: 4449-4695 bp Feature: domain Description: RVT_N Location: 4449-4695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4746-5331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4746-5331 bp Feature: gene Location: 6008-7519 bp Feature: domain Description: RVT_N Location: 6038-6284 bp Feature: domain Description: RVT_N Location: 6038-62 84 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6335-6767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6335-6767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6770-6932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6770-6932 bp Feature: domain Description: GIIM Note: maturase Location: 6992-7178 bp Feature: domain Description: GIIM Note: maturase Location: 6992 -7178 bp Feature: domain Description: McrA Location: 7208-7493 bp Feature: domain Description: McrA Location: 72 08-7493 bp Feature: gene Location: 8081-8860 bp Feature: domain Description: InsQ Location: 8123-8843 bp Feature: domain Description: InsQ Location: 812 3-8843 bp Feature: gene Location: 9047-10774 bp Feature: domain Description: RVT_N Location: 9092-9338 bp Feature: domain Description: RVT_N Location: 9092 -9338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9380-10040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9380-10040 bp Feature: domain Description: GIIM Note: maturase Location: 10118-10352 bp Feature: domain Description: GIIM Note: maturase Location: 10118-10352 bp Feature: domain Description: McrA Location: 10442-10739 bp Feature: domain Description: McrA Location: 10442 -10739 bp Feature: gene Location: 11364-11723 bp Feature: gene Location: 12453-13373 bp Feature: domain Description: RVT_N Location: 12546-12792 bp Feature: domain Description: RVT_N Location: 12 546-12 792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12843-13269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 843-132 69 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13272-13359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 72 -13359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RVT-GII, InsQ (COG0675)

Seq: JAAHHM010000187.1 Moorea sp. SIO3E8 3E8_NODE_187, whole genome shotgun sequence (10237 bp)
Overview 1 RT 1: 4791-9931 bp Neighborhood of RT #1 [4791, 9975] RVT_N RVT_N RVT-GII DUF4096 DDE_Tnp_1 RVT-GII GIIM McrA RVT-GII RVT-GII GIIM HNH Feature: gene Location: 4791-5105 bp Feature: domain Description: RVT_N Location: 4830-5034 bp Feature: domain Description: RVT_N Location: 483 0-503 4 bp Feature: gene Location: 5230-5382 bp Feature: gene Location: 5612-6412 bp Feature: domain Description: RVT_N Location: 5657-5903 bp Feature: domain Description: RVT_N Location: 5657-5903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5945-6329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5945-63 29 bp Feature: gene Location: 6536-6778 bp Feature: domain Description: DUF4096 Location: 6560-6776 bp Feature: domain Description: DUF4096 Location: 6560-6776 bp Feature: gene Location: 6899-7123 bp Feature: domain Description: DDE_Tnp_1 Location: 6911-7103 bp Feature: domain Description: DDE_Tnp_1 Location: 6911-7103 bp Feature: gene Location: 7199-7360 bp Feature: gene Location: 7371-8270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7374-7509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 74-7509 bp Feature: domain Description: GIIM Note: maturase Location: 7587-7821 bp Feature: domain Description: GIIM Note: maturase Location: 7587-7821 bp Feature: domain Description: McrA Location: 7938-8199 bp Feature: domain Description: McrA Location: 793 8-8199 bp Feature: gene Location: 8459-8896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8468-8855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8468-8855 bp Feature: gene Location: 8880-9692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8883-9135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8883 -913 5 bp Feature: domain Description: GIIM Note: maturase Location: 9213-9447 bp Feature: domain Description: GIIM Note: maturase Location: 9213 -9447 bp Feature: gene Location: 9733-9975 bp Feature: domain Description: HNH Note: nucleases Location: 9799-9931 bp Feature: domain Description: HNH Note: nucleases Location: 9799-993 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609), GIIM (pfam08388), McrA (COG4058), HNH (pfam01844)

Seq: JAAHHM010000202.1 Moorea sp. SIO3E8 3E8_NODE_202, whole genome shotgun sequence (8988 bp)
Overview 1 RT 1: 156-2820 bp Neighborhood of RT #1 [156, 2820] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 156-365 bp Feature: gene Location: 686-1414 bp Feature: domain Description: RVT_N Location: 713-959 bp Feature: domain Description: RVT_N Location: 713-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010-1394 bp Feature: gene Location: 1458-2201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1461-1605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 61-1605 bp Feature: domain Description: GIIM Note: maturase Location: 1662-1848 bp Feature: domain Description: GIIM Note: maturase Location: 1662-184 8 bp Feature: domain Description: McrA Location: 1878-2163 bp Feature: domain Description: McrA Location: 1878-2163 bp Feature: gene Location: 2256-2405 bp Feature: gene Location: 2452-2820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000205.1 Moorea sp. SIO3E8 3E8_NODE_205, whole genome shotgun sequence (8714 bp)
Overview 1 RT 1: 93-2676 bp Neighborhood of RT #1 [93, 2678] RVT_N RVT-GII RVT-GII GIIM McrA pren_cyc_PirE Feature: gene Location: 93-1574 bp Feature: domain Description: RVT_N Location: 120-366 bp Feature: domain Description: RVT_N Location: 120-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1011 bp Feature: domain Description: GIIM Note: maturase Location: 1068-1254 bp Feature: domain Description: GIIM Note: maturase Location: 1068-125 4 bp Feature: domain Description: McrA Location: 1263-1539 bp Feature: domain Description: McrA Location: 1263-15 39 bp Feature: gene Location: 2024-2164 bp Feature: gene Location: 2517-2678 bp Feature: domain Description: pren_cyc_PirE Location: 2520-2676 bp Feature: domain Description: pren_cyc_PirE Location: 25 20-2676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), pren_cyc_PirE (TIGR04446)

Seq: JAAHHM010000022.1 Moorea sp. SIO3E8 3E8_NODE_22, whole genome shotgun sequence (123686 bp)
Overview 1 RT 1: 317-4186 bp Neighborhood of RT #1 [317, 4302] RVT_N RVT-GII RVT-GII GIIM McrA PRK12467 Feature: gene Location: 317-448 bp Feature: gene Location: 610-1365 bp Feature: domain Description: RVT_N Location: 649-895 bp Feature: domain Description: RVT_N Location: 6 49-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1324 bp Feature: gene Location: 1451-2323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1457-1589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1457-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1667-1901 bp Feature: domain Description: GIIM Note: maturase Location: 16 6 7-1901 bp Feature: domain Description: McrA Location: 2018-2300 bp Feature: domain Description: McrA Location: 2018-2300 bp Feature: gene Location: 2332-2529 bp Feature: gene Location: 2713-4302 bp Feature: domain Description: PRK12467 Location: 2728-4186 bp Feature: domain Description: PRK1246 7 Location: 2728-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK12467 (peptide synthase; Provisional)

Seq: JAAHHM010000251.1 Moorea sp. SIO3E8 3E8_NODE_251, whole genome shotgun sequence (4958 bp)
Overview 1 RT 1: 1508-4730 bp Neighborhood of RT #1 [1508, 4730] RVT_N RVT-GII RVT-GII group_II_RT_mat HNHc Feature: gene Location: 1508-1672 bp Feature: gene Location: 1887-2180 bp Feature: gene Location: 2529-3041 bp Feature: domain Description: RVT_N Location: 2571-2826 bp Feature: domain Description: RVT_N Location: 257 1-2826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2871-3036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287 1-3036 bp Feature: gene Location: 3129-4364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147-3549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3147 -3549 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3693-3921 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3693-3921 bp Feature: domain Description: HNHc Note: nucleases Location: 4179-4341 bp Feature: domain Description: HNHc Note: nucleases Location: 417 9-4341 bp Feature: gene Location: 4386-4535 bp Feature: gene Location: 4539-4730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: JAAHHM010000256.1 Moorea sp. SIO3E8 3E8_NODE_256, whole genome shotgun sequence (4862 bp)
Overview 1 RT 1: 124-2001 bp Neighborhood of RT #1 [124, 2027] RVT-GII RVT_N RVT-GII HTH_32 Feature: gene Location: 124-267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-256 bp Feature: gene Location: 455-769 bp Feature: domain Description: RVT_N Location: 461-611 bp Feature: domain Description: RVT_N Location: 461-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 659-740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 659-740 bp Feature: gene Location: 1393-1548 bp Feature: gene Location: 1566-2027 bp Feature: domain Description: HTH_32 Location: 1761-2001 bp Feature: domain Description: HTH_32 Location: 1761-2001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), HTH_32 (pfam13565)

Seq: JAAHHM010000259.1 Moorea sp. SIO3E8 3E8_NODE_259, whole genome shotgun sequence (4807 bp)
Overview 1 RT 1: 116-4588 bp Neighborhood of RT #1 [116, 4588] CHASE2 CHD RVT_N RVT-GII GIIM HNHc Feature: gene Location: 116-1696 bp Feature: domain Description: CHASE2 Location: 137-1328 bp Feature: domain Description: CHASE2 Location: 137-1328 bp Feature: domain Description: CHD Location: 1442-1682 bp Feature: domain Description: CHD Location: 1442-1682 bp Feature: gene Location: 1711-1965 bp Feature: gene Location: 2064-3923 bp Feature: domain Description: RVT_N Location: 2151-2397 bp Feature: domain Description: RVT_N Location: 2151-239 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2445-3114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2445-3114 bp Feature: domain Description: GIIM Note: maturase Location: 3186-3417 bp Feature: domain Description: GIIM Note: maturase Location: 3186-3417 bp Feature: domain Description: HNHc Note: nucleases Location: 3624-3780 bp Feature: domain Description: HNHc Note: nucleases Location: 3624-3780 bp Feature: gene Location: 4032-4400 bp Feature: gene Location: 4403-4588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHASE2 (smart01080), CHD (cd07302), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHM010000263.1 Moorea sp. SIO3E8 3E8_NODE_263, whole genome shotgun sequence (4614 bp)
Overview 1 RT 1: 1314-3936 bp Neighborhood of RT #1 [1314, 3977] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 1314-1580 bp Feature: gene Location: 2036-2257 bp Feature: gene Location: 2600-3244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2615-2813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2615-2813 bp Feature: domain Description: GIIM Note: maturase Location: 2891-3125 bp Feature: domain Description: GIIM Note: maturase Location: 2891-3125 bp Feature: gene Location: 3261-3977 bp Feature: domain Description: RVT_N Location: 3309-3507 bp Feature: domain Description: RVT_N Location: 3309-3507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3549-3936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3549-3936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: JAAHHM010000279.1 Moorea sp. SIO3E8 3E8_NODE_279, whole genome shotgun sequence (3568 bp)
Overview 1 RT 1: 98-3393 bp Neighborhood of RT #1 [98, 3566] InsQ RVT_N RVT-GII RVT-GII Feature: gene Location: 98-1795 bp Feature: domain Description: InsQ Location: 743-1775 bp Feature: domain Description: InsQ Location: 743-1775 bp Feature: gene Location: 2397-2537 bp Feature: gene Location: 2567-3232 bp Feature: domain Description: RVT_N Location: 2570-2699 bp Feature: domain Description: RVT_N Location: 2570-2699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741-3125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741-3125 bp Feature: gene Location: 3273-3566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279-3393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279-3393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHM010000301.1 Moorea sp. SIO3E8 3E8_NODE_301, whole genome shotgun sequence (2662 bp)
Overview 1 RT 1: 3-1751 bp Neighborhood of RT #1 [3, 1751] RVT-GII GIIM HNHc Feature: gene Location: 3-1190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186-372 bp Feature: domain Description: GIIM Note: maturase Location: 447-678 bp Feature: domain Description: GIIM Note: maturase Location: 447-678 bp Feature: domain Description: HNHc Note: nucleases Location: 897-1059 bp Feature: domain Description: HNHc Note: nucleases Location: 897-1059 bp Feature: gene Location: 1193-1429 bp Feature: gene Location: 1572-1751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHM010000303.1 Moorea sp. SIO3E8 3E8_NODE_303, whole genome shotgun sequence (2569 bp)
Overview 1 RT 1: 576-2280 bp Neighborhood of RT #1 [576, 2339] RVT_N RVT-GII GIIM McrA Feature: gene Location: 576-2339 bp Feature: domain Description: RVT_N Location: 621-867 bp Feature: domain Description: RVT_N Location: 621-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1578 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1890 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1890 bp Feature: domain Description: McrA Location: 2007-2280 bp Feature: domain Description: McrA Location: 2007-2280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000307.1 Moorea sp. SIO3E8 3E8_NODE_307, whole genome shotgun sequence (2460 bp)
Overview 1 RT 1: 581-2276 bp Neighborhood of RT #1 [581, 2344] RVT_N RVT-GII GIIM HNH Feature: gene Location: 581-2344 bp Feature: domain Description: RVT_N Location: 626-872 bp Feature: domain Description: RVT_N Location: 626-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914 -1583 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1895 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1895 bp Feature: domain Description: HNH Note: nucleases Location: 2141-2276 bp Feature: domain Description: HNH Note: nucleases Location: 214 1-2276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHM010000308.1 Moorea sp. SIO3E8 3E8_NODE_308, whole genome shotgun sequence (2438 bp)
Overview 1 RT 1: 115-1786 bp Neighborhood of RT #1 [115, 1857] RVT_N RVT-GII GIIM McrA Feature: gene Location: 115-1857 bp Feature: domain Description: RVT_N Location: 154-400 bp Feature: domain Description: RVT_N Location: 15 4-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1093 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1408 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1408 bp Feature: domain Description: McrA Location: 1498-1786 bp Feature: domain Description: McrA Location: 1498-1786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000309.1 Moorea sp. SIO3E8 3E8_NODE_309, whole genome shotgun sequence (2407 bp)
Overview 1 RT 1: 123-2263 bp Neighborhood of RT #1 [123, 2301] RVT_N RVT-GII GIIM McrA Feature: gene Location: 123-287 bp Feature: gene Location: 583-2301 bp Feature: domain Description: RVT_N Location: 628-874 bp Feature: domain Description: RVT_N Location: 628-874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916 -1567 bp Feature: domain Description: GIIM Note: maturase Location: 1645-1879 bp Feature: domain Description: GIIM Note: maturase Location: 16 45-1879 bp Feature: domain Description: McrA Location: 1960-2263 bp Feature: domain Description: McrA Location: 1960-2263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000313.1 Moorea sp. SIO3E8 3E8_NODE_313, whole genome shotgun sequence (2207 bp)
Overview 1 RT 1: 33-2205 bp Neighborhood of RT #1 [33, 2205] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 33-1610 bp Feature: domain Description: RVT_N Location: 57-303 bp Feature: domain Description: RVT_N Location: 57-303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-948 bp Feature: domain Description: GIIM Note: maturase Location: 1005-1185 bp Feature: domain Description: GIIM Note: maturase Location: 1005-1185 bp Feature: domain Description: McrA Location: 1221-1506 bp Feature: domain Description: McrA Location: 1221-1506 bp Feature: gene Location: 1906-2205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000315.1 Moorea sp. SIO3E8 3E8_NODE_315, whole genome shotgun sequence (2162 bp)
Overview 1 RT 1: 79-1561 bp Neighborhood of RT #1 [79, 1599] RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 79-1599 bp Feature: domain Description: RVT_N Location: 115-355 bp Feature: domain Description: RVT_N Location: 115-355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841-1006 bp Feature: domain Description: McrA Location: 1246-1561 bp Feature: domain Description: McrA Location: 1246-1561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHM010000320.1 Moorea sp. SIO3E8 3E8_NODE_320, whole genome shotgun sequence (1944 bp)
Overview 1 RT 1: 88-1940 bp Neighborhood of RT #1 [88, 1942] RVT-GII group_II_RT_mat HNHc RVT_N RVT-GII Feature: gene Location: 88-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-331 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 457-706 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 457-706 bp Feature: domain Description: HNHc Note: nucleases Location: 964-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 964-1126 bp Feature: gene Location: 1202-1942 bp Feature: domain Description: RVT_N Location: 1259-1514 bp Feature: domain Description: RVT_N Location: 1259-1514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556-19 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHM010000325.1 Moorea sp. SIO3E8 3E8_NODE_325, whole genome shotgun sequence (1849 bp)
Overview 1 RT 1: 114-1785 bp Neighborhood of RT #1 [114, 1820] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 114-1820 bp Feature: domain Description: RVT_N Location: 153-399 bp Feature: domain Description: RVT_N Location: 153-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1095 bp Feature: domain Description: GIIM Note: maturase Location: 1188-1407 bp Feature: domain Description: GIIM Note: maturase Location: 1188-1407 bp Feature: domain Description: HNHc Note: nucleases Location: 1620-1785 bp Feature: domain Description: HNHc Note: nucleases Location: 1620 -1785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHM010000326.1 Moorea sp. SIO3E8 3E8_NODE_326, whole genome shotgun sequence (1843 bp)
Overview 1 RT 1: 109-1731 bp Neighborhood of RT #1 [109, 1820] McrA RVT_N RVT-GII GIIM Feature: gene Location: 109-471 bp Feature: domain Description: McrA Location: 136-451 bp Feature: domain Description: McrA Location: 136-451 bp Feature: gene Location: 516-1820 bp Feature: domain Description: RVT_N Location: 561-807 bp Feature: domain Description: RVT_N Location: 561-807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 849-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 849-1500 bp Feature: domain Description: GIIM Note: maturase Location: 1581-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1581-1731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHM010000330.1 Moorea sp. SIO3E8 3E8_NODE_330, whole genome shotgun sequence (1796 bp)
Overview 1 RT 1: 192-1692 bp Neighborhood of RT #1 [192, 1694] GIIM RVT_N RVT-GII Feature: gene Location: 192-593 bp Feature: domain Description: GIIM Note: maturase Location: 207-357 bp Feature: domain Description: GIIM Note: maturase Location: 207-357 bp Feature: gene Location: 786-1694 bp Feature: domain Description: RVT_N Location: 810-1056 bp Feature: domain Description: RVT_N Location: 810-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1107-1692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1107-1692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT_N (pfam13655), RVT-GII

Seq: JAAHHM010000333.1 Moorea sp. SIO3E8 3E8_NODE_333, whole genome shotgun sequence (1738 bp)
Overview 1 RT 1: 113-1703 bp Neighborhood of RT #1 [113, 1735] RVT_N RVT-GII GIIM McrA Feature: gene Location: 113-1735 bp Feature: domain Description: RVT_N Location: 116-317 bp Feature: domain Description: RVT_N Location: 116-317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-1010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-1010 bp Feature: domain Description: GIIM Note: maturase Location: 1088-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1088-1322 bp Feature: domain Description: McrA Location: 1415-1703 bp Feature: domain Description: McrA Location: 1415-1703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHM010000340.1 Moorea sp. SIO3E8 3E8_NODE_340, whole genome shotgun sequence (1628 bp)
Overview 1 RT 1: 98-1499 bp Neighborhood of RT #1 [98, 1627] RVT-GII GIIM HNHc Feature: gene Location: 98-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155-821 bp Feature: domain Description: GIIM Note: maturase Location: 896-1127 bp Feature: domain Description: GIIM Note: maturase Location: 896-1127 bp Feature: domain Description: HNHc Note: nucleases Location: 1334-1499 bp Feature: domain Description: HNHc Note: nucleases Location: 1334-1499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHM010000346.1 Moorea sp. SIO3E8 3E8_NODE_346, whole genome shotgun sequence (1482 bp)
Overview 1 RT 1: 2-1438 bp Neighborhood of RT #1 [2, 1438] RVT_N RVT-GII RVT-GII Feature: gene Location: 2-910 bp Feature: domain Description: RVT_N Location: 26-272 bp Feature: domain Description: RVT_N Location: 26-272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-911 bp Feature: gene Location: 1247-1438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHM010000349.1 Moorea sp. SIO3E8 3E8_NODE_349, whole genome shotgun sequence (1474 bp)
Overview 1 RT 1: 111-1419 bp Neighborhood of RT #1 [111, 1472] RVT-GII GIIM HNH Feature: gene Location: 111-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-738 bp Feature: domain Description: GIIM Note: maturase Location: 819-1050 bp Feature: domain Description: GIIM Note: maturase Location: 819-1050 bp Feature: domain Description: HNH Note: nucleases Location: 1284-1419 bp Feature: domain Description: HNH Note: nucleases Location: 1284-1419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHM010000358.1 Moorea sp. SIO3E8 3E8_NODE_358, whole genome shotgun sequence (1367 bp)
Overview 1 RT 1: 94-1234 bp Neighborhood of RT #1 [94, 1365] RVT-GII GIIM HNHc Feature: gene Location: 94-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-556 bp Feature: domain Description: GIIM Note: maturase Location: 628-856 bp Feature: domain Description: GIIM Note: maturase Location: 628-856 bp Feature: domain Description: HNHc Note: nucleases Location: 1075-1234 bp Feature: domain Description: HNHc Note: nucleases Location: 1075-1234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHM010000089.1 Moorea sp. SIO3E8 3E8_NODE_89, whole genome shotgun sequence (28624 bp)
Overview 1 RT 1: 16341-24542 bp Neighborhood of RT #1 [16341, 24542] HTH_17 RVT_N RVT-GII RVT-GII GIIM McrA NB-ARC TPR_12 TPR_10 TPR_12 TPR_12 TPR_12 TPR_10 TPR_12 NB-ARC TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 Feature: gene Location: 16341-16802 bp Feature: domain Description: HTH_17 Location: 16377-16485 bp Feature: domain Description: HTH_17 Location: 16377-16485 bp Feature: gene Location: 17348-17563 bp Feature: domain Description: RVT_N Location: 17384-17528 bp Feature: domain Description: RVT_N Location: 17384-17528 bp Feature: gene Location: 17734-18192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17788-18169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17788-18169 bp Feature: gene Location: 18236-18985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18239-18383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18239-18383 bp Feature: domain Description: GIIM Note: maturase Location: 18440-18599 bp Feature: domain Description: GIIM Note: maturase Location: 18440-18599 bp Feature: domain Description: McrA Location: 18656-18938 bp Feature: domain Description: McrA Location: 18656-18938 bp Feature: gene Location: 19315-24075 bp Feature: domain Description: NB-ARC Location: 19606-20320 bp Feature: domain Description: NB-ARC Location: 19606-20320 bp Feature: domain Description: TPR_12 Location: 20737-20941 bp Feature: domain Description: TPR_12 Location: 20737-20941 bp Feature: domain Description: TPR_10 Location: 20971-21049 bp Feature: domain Description: TPR_10 Location: 20971-21049 bp Feature: domain Description: TPR_12 Location: 21091-21319 bp Feature: domain Description: TPR_12 Location: 21091-21319 bp Feature: domain Description: TPR_12 Location: 21358-21571 bp Feature: domain Description: TPR_12 Location: 21358-21571 bp Feature: domain Description: TPR_12 Location: 21613-21823 bp Feature: domain Description: TPR_12 Location: 21613-21823 bp Feature: domain Description: TPR_10 Location: 21850-21967 bp Feature: domain Description: TPR_10 Location: 21850-21967 bp Feature: domain Description: TPR_12 Location: 21973-22195 bp Feature: domain Description: TPR_12 Location: 21973-22195 bp Feature: domain Description: NB-ARC Location: 22237-22462 bp Feature: domain Description: NB-ARC Location: 22237-22462 bp Feature: domain Description: TPR_12 Location: 23029-23230 bp Feature: domain Description: TPR_12 Location: 23029-23230 bp Feature: domain Description: TPR_12 Location: 23296-23482 bp Feature: domain Description: TPR_12 Location: 23296-23482 bp Feature: domain Description: TPR_10 Location: 23512-23620 bp Feature: domain Description: TPR_10 Location: 23512-23620 bp Feature: domain Description: TPR_12 Location: 23635-23860 bp Feature: domain Description: TPR_12 Location: 23635-23860 bp Feature: domain Description: TPR_12 Location: 23887-24064 bp Feature: domain Description: TPR_12 Location: 23887-24064 bp Feature: gene Location: 24096-24542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), NB-ARC (pfam00931), TPR_12 (pfam13424), TPR_10 (pfam13374)

Seq: JAAHHM010000096.1 Moorea sp. SIO3E8 3E8_NODE_96, whole genome shotgun sequence (27675 bp)
Overview 1 RT 1: 19500-23254 bp Neighborhood of RT #1 [19500, 23271] RVT-Retrons XisI XisH Feature: gene Location: 19500-19634 bp Feature: gene Location: 19896-20612 bp Feature: gene Location: 20798-22210 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21344-21965 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21344-21965 bp Feature: gene Location: 22670-23011 bp Feature: domain Description: XisI Location: 22673-23006 bp Feature: domain Description: XisI Location: 22673-23006 bp Feature: gene Location: 22999-23271 bp Feature: domain Description: XisH Location: 23011-23254 bp Feature: domain Description: XisH Location: 23011-23254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, XisI (pfam08869), XisH (pfam08814)