myRT

myRT report for GCA_010692465.1_ASM1069246v1

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Seq: JAAHHH010001019.1 Moorea sp. SIO3C2 3C2_NODE_1019, whole genome shotgun sequence (2529 bp)
Overview 1 RT 1: 102-2417 bp Neighborhood of RT #1 [102, 2527] RVT_N RVT-GII AAA_16 Feature: gene Location: 102-815 bp Feature: domain Description: RVT_N Location: 150-348 bp Feature: domain Description: RVT_N Location: 1 50-348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-789 bp Feature: gene Location: 1742-2527 bp Feature: domain Description: AAA_16 Location: 1859-2417 bp Feature: domain Description: AAA_1 6 Location: 1 859-241 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, AAA_16 (pfam13191)

Seq: JAAHHH010001069.1 Moorea sp. SIO3C2 3C2_NODE_1069, whole genome shotgun sequence (2374 bp)
Overview 1 RT 1: 154-2371 bp Neighborhood of RT #1 [154, 2371] RVT-UG4 Feature: gene Location: 154-1224 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 502-952 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 502 -952 bp Feature: gene Location: 2135-2371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JAAHHH010001123.1 Moorea sp. SIO3C2 3C2_NODE_1123, whole genome shotgun sequence (2253 bp)
Overview 1 RT 1: 3-1612 bp Neighborhood of RT #1 [3, 1641] RVT-GII GIIM HNHc RVT-GII Feature: gene Location: 3-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-612 bp Feature: domain Description: GIIM Note: maturase Location: 678-903 bp Feature: domain Description: GIIM Note: maturase Location: 678-903 bp Feature: domain Description: HNHc Note: nucleases Location: 1128-1281 bp Feature: domain Description: HNHc Note: nucleases Location: 1128-1281 bp Feature: gene Location: 1261-1641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1543-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1543 -1612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHH010001153.1 Moorea sp. SIO3C2 3C2_NODE_1153, whole genome shotgun sequence (2191 bp)
Overview 1 RT 1: 3-2058 bp Neighborhood of RT #1 [3, 2087] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 3-191 bp Feature: gene Location: 456-2087 bp Feature: domain Description: RVT_N Location: 612-858 bp Feature: domain Description: RVT_N Location: 612-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1338-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1338-1503 bp Feature: domain Description: GIIM Note: maturase Location: 1560-1737 bp Feature: domain Description: GIIM Note: maturase Location: 1560-1737 bp Feature: domain Description: McrA Location: 1743-2058 bp Feature: domain Description: McrA Location: 174 3-2058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010001164.1 Moorea sp. SIO3C2 3C2_NODE_1164, whole genome shotgun sequence (2170 bp)
Overview 1 RT 1: 91-2066 bp Neighborhood of RT #1 [91, 2066] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 91-1602 bp Feature: domain Description: RVT_N Location: 127-373 bp Feature: domain Description: RVT_N Location: 127-373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 3-1015 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1201 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1201 bp Feature: domain Description: McrA Location: 1270-1573 bp Feature: domain Description: McrA Location: 1270-15 73 bp Feature: gene Location: 1737-2066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010001222.1 Moorea sp. SIO3C2 3C2_NODE_1222, whole genome shotgun sequence (2046 bp)
Overview 1 RT 1: 87-1579 bp Neighborhood of RT #1 [87, 1602] RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 87-830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-234 bp Feature: domain Description: GIIM Note: maturase Location: 291-477 bp Feature: domain Description: GIIM Note: maturase Location: 291-477 bp Feature: domain Description: McrA Location: 498-792 bp Feature: domain Description: McrA Location: 498-792 bp Feature: gene Location: 874-1602 bp Feature: domain Description: RVT_N Location: 901-1147 bp Feature: domain Description: RVT_N Location: 901-1147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198-1579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHH010001248.1 Moorea sp. SIO3C2 3C2_NODE_1248, whole genome shotgun sequence (1986 bp)
Overview 1 RT 1: 14-1496 bp Neighborhood of RT #1 [14, 1984] RVT-UG25 Feature: gene Location: 14-1984 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 1097-1496 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 1097 -1496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25

Seq: JAAHHH010001316.1 Moorea sp. SIO3C2 3C2_NODE_1316, whole genome shotgun sequence (1898 bp)
Overview 1 RT 1: 2-1897 bp Neighborhood of RT #1 [2, 1896] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 2-226 bp Feature: gene Location: 705-1490 bp Feature: domain Description: RVT_N Location: 750-996 bp Feature: domain Description: RVT_N Location: 750-996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038 -1446 bp Feature: gene Location: 1474-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-1714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1477-1714 bp Feature: domain Description: GIIM Note: maturase Location: 1798-1897 bp Feature: domain Description: GIIM Note: maturase Location: 1798 -18 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHH010001431.1 Moorea sp. SIO3C2 3C2_NODE_1431, whole genome shotgun sequence (1697 bp)
Overview 1 RT 1: 109-1570 bp Neighborhood of RT #1 [109, 1596] AzgA RVT_N RVT-GII Feature: gene Location: 109-309 bp Feature: domain Description: AzgA Location: 199-301 bp Feature: domain Description: AzgA Location: 19 9 -301 bp Feature: gene Location: 862-1596 bp Feature: domain Description: RVT_N Location: 901-1147 bp Feature: domain Description: RVT_N Location: 9 01-1147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1198-1570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119 8-1570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AzgA (COG2252), RVT_N (pfam13655), RVT-GII

Seq: JAAHHH010001633.1 Moorea sp. SIO3C2 3C2_NODE_1633, whole genome shotgun sequence (1463 bp)
Overview 1 RT 1: 209-1432 bp Neighborhood of RT #1 [209, 1461] InsQ RVT-GII GIIM McrA Feature: gene Location: 209-487 bp Feature: domain Description: InsQ Location: 245-467 bp Feature: domain Description: InsQ Location: 245-467 bp Feature: gene Location: 532-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-877 bp Feature: domain Description: GIIM Note: maturase Location: 934-1087 bp Feature: domain Description: GIIM Note: maturase Location: 934-10 87 bp Feature: domain Description: McrA Location: 1120-1432 bp Feature: domain Description: McrA Location: 1120-1432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010001661.1 Moorea sp. SIO3C2 3C2_NODE_1661, whole genome shotgun sequence (1440 bp)
Overview 1 RT 1: 2-1437 bp Neighborhood of RT #1 [2, 1437] RVT-UG4 Feature: gene Location: 2-1018 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 329-782 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 329-782 bp Feature: gene Location: 1159-1437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: JAAHHH010000171.1 Moorea sp. SIO3C2 3C2_NODE_171, whole genome shotgun sequence (9380 bp)
Overview 1 RT 1: 2-8527 bp Neighborhood of RT #1 [2, 8527] TIGR03607 RVT-CRISPR-like murD Feature: gene Location: 2-277 bp Feature: gene Location: 320-6502 bp Feature: domain Description: TIGR03607 Location: 362-2618 bp Feature: domain Description: TIGR03607 Location: 362-2618 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4346-4616 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4346-4616 bp Feature: gene Location: 6544-7956 bp Feature: domain Description: murD Location: 6553-7945 bp Feature: domain Description: murD Location: 6553-7945 bp Feature: gene Location: 8360-8527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03607 (patatin-related protein), RVT-CRISPR, murD (TIGR01087)

Seq: JAAHHH010001818.1 Moorea sp. SIO3C2 3C2_NODE_1818, whole genome shotgun sequence (1284 bp)
Overview 1 RT 1: 331-1284 bp Neighborhood of RT #1 [331, 1283] RVT-UNC Feature: gene Location: 331-639 bp Feature: gene Location: 686-850 bp Feature: gene Location: 864-1283 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1155-1284 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1155-1284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3/RVT-UG18/RVT-CRISPR/RVT-UG4(RVT-UNC)

Seq: JAAHHH010000201.1 Moorea sp. SIO3C2 3C2_NODE_201, whole genome shotgun sequence (8624 bp)
Overview 1 RT 1: 4104-8233 bp Neighborhood of RT #1 [4104, 8233] XisH XisI RVT-Retrons Feature: gene Location: 4104-4439 bp Feature: domain Description: XisH Location: 4179-4422 bp Feature: domain Description: XisH Location: 4179-4422 bp Feature: gene Location: 4427-4768 bp Feature: domain Description: XisI Location: 4430-4763 bp Feature: domain Description: XisI Location: 4430-4763 bp Feature: gene Location: 5337-6749 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5883-6504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5883-6504 bp Feature: gene Location: 7311-8027 bp Feature: gene Location: 8102-8233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XisH (pfam08814), XisI (pfam08869), RVT-Retrons

Seq: JAAHHH010002080.1 Moorea sp. SIO3C2 3C2_NODE_2080, whole genome shotgun sequence (1118 bp)
Overview 1 RT 1: 237-1080 bp Neighborhood of RT #1 [237, 1115] RVT-GII GIIM McrA Feature: gene Location: 237-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-522 bp Feature: domain Description: GIIM Note: maturase Location: 579-723 bp Feature: domain Description: GIIM Note: maturase Location: 579-723 bp Feature: domain Description: McrA Location: 795-1080 bp Feature: domain Description: McrA Location: 795-1080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010000216.1 Moorea sp. SIO3C2 3C2_NODE_216, whole genome shotgun sequence (8265 bp)
Overview 1 RT 1: 2861-7847 bp Neighborhood of RT #1 [2861, 7852] ComEB thy_syn_methano TIGR00284 RVT_N RVT-GII RVT-GII GIIM McrA PRK00964 DDE_Tnp_1_assoc Feature: gene Location: 2861-3424 bp Feature: domain Description: ComEB Location: 2885-3365 bp Feature: domain Description: ComEB Location: 2885-3365 bp Feature: gene Location: 3783-4775 bp Feature: domain Description: thy_syn_methano Location: 3954-4470 bp Feature: domain Description: thy_syn_methano Location: 3954-4470 bp Feature: domain Description: TIGR00284 Location: 4491-4770 bp Feature: domain Description: TIGR00284 Location: 4491-4770 bp Feature: gene Location: 4736-6247 bp Feature: domain Description: RVT_N Location: 4772-5015 bp Feature: domain Description: RVT_N Location: 4772-5015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5069-5489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5069-5489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5498-5663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5498-5663 bp Feature: domain Description: GIIM Note: maturase Location: 5720-5873 bp Feature: domain Description: GIIM Note: maturase Location: 5720-5873 bp Feature: domain Description: McrA Location: 5918-6218 bp Feature: domain Description: McrA Location: 5918-6218 bp Feature: gene Location: 6773-7444 bp Feature: domain Description: PRK00964 Location: 6899-7094 bp Feature: domain Description: PRK00964 Location: 6899-7094 bp Feature: gene Location: 7658-7852 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 7661-7847 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 7661-7847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComEB (TIGR02571), thy_syn_methano (TIGR03283), TIGR00284 (dihydropteroate synthase-related protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK00964 (tetrahydromethanopterin S-methyltransferase subunit A; Provisional), DDE_Tnp_1_assoc (pfam13808)

Seq: JAAHHH010002351.1 Moorea sp. SIO3C2 3C2_NODE_2351, whole genome shotgun sequence (1003 bp)
Overview 1 RT 1: 101-930 bp Neighborhood of RT #1 [101, 1001] RVT-GII RVT-GII Feature: gene Location: 101-625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131-347 bp Feature: gene Location: 606-1001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAHHH010000033.1 Moorea sp. SIO3C2 3C2_NODE_33, whole genome shotgun sequence (27348 bp)
Overview 1 RT 1: 25363-27253 bp Neighborhood of RT #1 [25363, 27294] RVT-GII GIIM McrA Feature: gene Location: 25363-25581 bp Feature: gene Location: 25742-25894 bp Feature: gene Location: 26245-27294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26335-26593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26335-26593 bp Feature: domain Description: GIIM Note: maturase Location: 26680-26905 bp Feature: domain Description: GIIM Note: maturase Location: 26680-26905 bp Feature: domain Description: McrA Location: 26956-27253 bp Feature: domain Description: McrA Location: 26956-27253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010000330.1 Moorea sp. SIO3C2 3C2_NODE_330, whole genome shotgun sequence (6444 bp)
Overview 1 RT 1: 208-5323 bp Neighborhood of RT #1 [208, 5685] RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII YkfC HNHc InsQ Feature: gene Location: 208-366 bp Feature: gene Location: 481-909 bp Feature: domain Description: RVT_N Location: 526-772 bp Feature: domain Description: RVT_N Location: 526-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 814-898 bp Feature: gene Location: 1121-2185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1487 bp Feature: domain Description: GIIM Note: maturase Location: 1571-1799 bp Feature: domain Description: GIIM Note: maturase Location: 1571-1799 bp Feature: domain Description: McrA Location: 1874-2141 bp Feature: domain Description: McrA Location: 1874-2141 bp Feature: gene Location: 2197-2472 bp Feature: gene Location: 2855-4534 bp Feature: domain Description: RVT_N Location: 2903-3149 bp Feature: domain Description: RVT_N Location: 2903-3149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3197-3836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319 7-3836 bp Feature: domain Description: YkfC Location: 3959-4133 bp Feature: domain Description: YkfC Location: 3959-4133 bp Feature: domain Description: HNHc Note: nucleases Location: 4346-4502 bp Feature: domain Description: HNHc Note: nucleases Location: 4346-4502 bp Feature: gene Location: 4586-4717 bp Feature: gene Location: 5059-5685 bp Feature: domain Description: InsQ Location: 5068-5323 bp Feature: domain Description: InsQ Location: 5068-5323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YkfC (COG3344), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHHH010000339.1 Moorea sp. SIO3C2 3C2_NODE_339, whole genome shotgun sequence (6299 bp)
Overview 1 RT 1: 4726-6288 bp Neighborhood of RT #1 [4726, 6296] RVT_N RVT-GII Feature: gene Location: 4726-5055 bp Feature: gene Location: 5091-5303 bp Feature: gene Location: 5760-6296 bp Feature: domain Description: RVT_N Location: 5802-6057 bp Feature: domain Description: RVT_N Location: 5802-6057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6099-6288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6099-6288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHH010000051.1 Moorea sp. SIO3C2 3C2_NODE_51, whole genome shotgun sequence (16872 bp)
Overview 1 RT 1: 9925-13754 bp Neighborhood of RT #1 [9925, 13754] RVT-GII group_II_RT_mat HNHc RVT_N RVT-GII Feature: gene Location: 9925-10092 bp Feature: gene Location: 10123-10368 bp Feature: gene Location: 10593-11561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-10740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-10740 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 10872-11115 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 10872-11115 bp Feature: domain Description: HNHc Note: nucleases Location: 11373-11535 bp Feature: domain Description: HNHc Note: nucleases Location: 11373-11535 bp Feature: gene Location: 11638-12435 bp Feature: domain Description: RVT_N Location: 11680-11938 bp Feature: domain Description: RVT_N Location: 11680-11938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11980-12367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11980-12367 bp Feature: gene Location: 13094-13372 bp Feature: gene Location: 13557-13754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHH010000565.1 Moorea sp. SIO3C2 3C2_NODE_565, whole genome shotgun sequence (4343 bp)
Overview 1 RT 1: 2593-4216 bp Neighborhood of RT #1 [2593, 4242] RVT_N RVT-GII Feature: gene Location: 2593-2739 bp Feature: gene Location: 3240-3371 bp Feature: gene Location: 3484-4242 bp Feature: domain Description: RVT_N Location: 3529-3775 bp Feature: domain Description: RVT_N Location: 3529-3775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3817-4216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3817-4216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHH010000589.1 Moorea sp. SIO3C2 3C2_NODE_589, whole genome shotgun sequence (4180 bp)
Overview 1 RT 1: 3-3297 bp Neighborhood of RT #1 [3, 3297] M32_Taq InsQ RVT_N RVT-GII Feature: gene Location: 3-854 bp Feature: domain Description: M32_Taq Location: 144-798 bp Feature: domain Description: M32_Taq Location: 144-798 bp Feature: gene Location: 954-1352 bp Feature: domain Description: InsQ Location: 966-1314 bp Feature: domain Description: InsQ Location: 966-1314 bp Feature: gene Location: 1884-2561 bp Feature: domain Description: RVT_N Location: 1920-2163 bp Feature: domain Description: RVT_N Location: 1920-2163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217-2547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217-2547 bp Feature: gene Location: 2641-2883 bp Feature: gene Location: 2932-3297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M32_Taq (cd06460), InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHH010000593.1 Moorea sp. SIO3C2 3C2_NODE_593, whole genome shotgun sequence (4143 bp)
Overview 1 RT 1: 3-3433 bp Neighborhood of RT #1 [3, 3433] InsQ RVT_N RVT-GII YkfC McrA Feature: gene Location: 3-413 bp Feature: domain Description: InsQ Location: 6-372 bp Feature: domain Description: InsQ Location: 6-372 bp Feature: gene Location: 1029-2774 bp Feature: domain Description: RVT_N Location: 1062-1308 bp Feature: domain Description: RVT_N Location: 1062-1308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350-2049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350-2049 bp Feature: domain Description: YkfC Location: 2280-2400 bp Feature: domain Description: YkfC Location: 2280-24 00 bp Feature: domain Description: McrA Location: 2481-2748 bp Feature: domain Description: McrA Location: 24 81-2748 bp Feature: gene Location: 3063-3227 bp Feature: gene Location: 3269-3433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), McrA (COG4058)

Seq: JAAHHH010000693.1 Moorea sp. SIO3C2 3C2_NODE_693, whole genome shotgun sequence (3662 bp)
Overview 1 RT 1: 214-3177 bp Neighborhood of RT #1 [214, 3188] YhhI DDE_Tnp_1_assoc RVT-GII GIIM McrA RVT-GII RVT_N RVT-GII Feature: gene Location: 214-474 bp Feature: domain Description: YhhI Location: 217-400 bp Feature: domain Description: YhhI Location: 217-400 bp Feature: gene Location: 649-1125 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 652-823 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 652-823 bp Feature: gene Location: 1480-2340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483-1618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483-1618 bp Feature: domain Description: GIIM Note: maturase Location: 1705-1930 bp Feature: domain Description: GIIM Note: maturase Location: 1705-1930 bp Feature: domain Description: McrA Location: 2011-2311 bp Feature: domain Description: McrA Location: 2011-2311 bp Feature: gene Location: 2414-2665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2420-2612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2420-2612 bp Feature: gene Location: 2760-3188 bp Feature: domain Description: RVT_N Location: 2805-3051 bp Feature: domain Description: RVT_N Location: 2805-3051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093-3177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093-3177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHH010000085.1 Moorea sp. SIO3C2 3C2_NODE_85, whole genome shotgun sequence (13303 bp)
Overview 1 RT 1: 3-1704 bp Neighborhood of RT #1 [3, 1704] RVT-GII GIIM McrA Feature: gene Location: 3-140 bp Feature: gene Location: 251-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356-644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356-644 bp Feature: domain Description: GIIM Note: maturase Location: 722-956 bp Feature: domain Description: GIIM Note: maturase Location: 722-956 bp Feature: domain Description: McrA Location: 1067-1334 bp Feature: domain Description: McrA Location: 1067-1334 bp Feature: gene Location: 1391-1525 bp Feature: gene Location: 1528-1704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHH010000852.1 Moorea sp. SIO3C2 3C2_NODE_852, whole genome shotgun sequence (3079 bp)
Overview 1 RT 1: 1-2730 bp Neighborhood of RT #1 [1, 2735] RVT-UG4 COG5550 Feature: gene Location: 1-411 bp Feature: gene Location: 436-573 bp Feature: gene Location: 789-1868 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1134-1608 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1134-1608 bp Feature: gene Location: 2088-2576 bp Feature: gene Location: 2592-2735 bp Feature: domain Description: COG5550 Location: 2604-2730 bp Feature: domain Description: COG5550 Location: 2604-27 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, COG5550 (Predicted aspartyl protease )

Seq: JAAHHH010000096.1 Moorea sp. SIO3C2 3C2_NODE_96, whole genome shotgun sequence (12876 bp)
Overview 1 RT 1: 213-4301 bp Neighborhood of RT #1 [213, 4348] RVT_N RVT-GII GIIM McrA InsQ Y1_Tnp Feature: gene Location: 213-341 bp Feature: gene Location: 357-2144 bp Feature: domain Description: RVT_N Location: 471-717 bp Feature: domain Description: RVT_N Location: 471-717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1425 bp Feature: domain Description: GIIM Note: maturase Location: 1527-1758 bp Feature: domain Description: GIIM Note: maturase Location: 1527-1758 bp Feature: domain Description: McrA Location: 1824-2103 bp Feature: domain Description: McrA Location: 1824-2103 bp Feature: gene Location: 2665-3852 bp Feature: domain Description: InsQ Location: 2779-3763 bp Feature: domain Description: InsQ Location: 2779-3763 bp Feature: gene Location: 3920-4348 bp Feature: domain Description: Y1_Tnp Location: 3980-4301 bp Feature: domain Description: Y1_Tnp Location: 3980-4301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675), Y1_Tnp (pfam01797)

Seq: JAAHHH010000976.1 Moorea sp. SIO3C2 3C2_NODE_976, whole genome shotgun sequence (2630 bp)
Overview 1 RT 1: 146-1781 bp Neighborhood of RT #1 [146, 1813] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 146-1813 bp Feature: domain Description: RVT_N Location: 179-425 bp Feature: domain Description: RVT_N Location: 179-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1145 bp Feature: domain Description: GIIM Note: maturase Location: 1226-1454 bp Feature: domain Description: GIIM Note: maturase Location: 1226-1454 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1781 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)