myRT

myRT report for GCA_010692535.1_ASM1069253v1

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Seq: JAAHHF010001024.1 Okeania sp. SIO3B3 3B3_NODE_1024, whole genome shotgun sequence (3978 bp)
Overview 1 RT 1: 1708-3977 bp Neighborhood of RT #1 [1708, 3977] RVT_N RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 1708-1911 bp Feature: gene Location: 2096-2362 bp Feature: domain Description: RVT_N Location: 2213-2351 bp Feature: domain Description: RVT_N Location: 221 3-2351 bp Feature: gene Location: 2346-2954 bp Feature: domain Description: RVT_N Location: 2352-2457 bp Feature: domain Description: RVT_N Location: 2352-2457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2505-2883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2505-2883 bp Feature: gene Location: 2926-3471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2959-3193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2959-31 93 bp Feature: domain Description: GIIM Note: maturase Location: 3268-3457 bp Feature: domain Description: GIIM Note: maturase Location: 3268-3457 bp Feature: gene Location: 3828-3977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010001176.1 Okeania sp. SIO3B3 3B3_NODE_1176, whole genome shotgun sequence (3527 bp)
Overview 1 RT 1: 708-3359 bp Neighborhood of RT #1 [708, 3526] InsQ RVT_N RVT-GII RVT-GII Feature: gene Location: 708-1718 bp Feature: domain Description: InsQ Location: 711-1674 bp Feature: domain Description: InsQ Location: 711-1674 bp Feature: gene Location: 1773-1904 bp Feature: gene Location: 2365-3135 bp Feature: domain Description: RVT_N Location: 2425-2620 bp Feature: domain Description: RVT_N Location: 2 42 5-2 62 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2662-2977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 662 -2 977 bp Feature: gene Location: 3263-3526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3269-3359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 69-3359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010001270.1 Okeania sp. SIO3B3 3B3_NODE_1270, whole genome shotgun sequence (3313 bp)
Overview 1 RT 1: 279-3309 bp Neighborhood of RT #1 [279, 3311] tspaseT_teng_N InsQ RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 279-1601 bp Feature: domain Description: tspaseT_teng_N Location: 297-510 bp Feature: domain Description: tspaseT_teng_N Location: 297-510 bp Feature: domain Description: InsQ Location: 576-1461 bp Feature: domain Description: InsQ Location: 576-1461 bp Feature: gene Location: 2220-3311 bp Feature: domain Description: RVT_N Location: 2247-2493 bp Feature: domain Description: RVT_N Location: 2247-2493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2541-2961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2541-2961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-3135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-3 13 5 bp Feature: domain Description: GIIM Note: maturase Location: 3192-3309 bp Feature: domain Description: GIIM Note: maturase Location: 3 192-3 3 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tspaseT_teng_N (TIGR01765), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000132.1 Okeania sp. SIO3B3 3B3_NODE_132, whole genome shotgun sequence (10823 bp)
Overview 1 RT 1: 3339-7880 bp Neighborhood of RT #1 [3339, 7880] M48_Ste24p_like RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 3339-3611 bp Feature: gene Location: 3832-4791 bp Feature: domain Description: M48_Ste24p_like Location: 3985-4621 bp Feature: domain Description: M4 8_Ste24 p_like Location: 3985-4 621 bp Feature: gene Location: 5094-6605 bp Feature: domain Description: RVT_N Location: 5118-5364 bp Feature: domain Description: RVT_N Location: 5118-5364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5412-5832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 12-5832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5841-6006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584 1-6006 bp Feature: domain Description: GIIM Note: maturase Location: 6063-6192 bp Feature: domain Description: GIIM Note: maturase Location: 6063-6192 bp Feature: domain Description: McrA Location: 6282-6561 bp Feature: domain Description: McrA Location: 6282-6561 bp Feature: gene Location: 7437-7670 bp Feature: gene Location: 7698-7880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M48_Ste24p_like (cd07328), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010001488.1 Okeania sp. SIO3B3 3B3_NODE_1488, whole genome shotgun sequence (2796 bp)
Overview 1 RT 1: 320-2350 bp Neighborhood of RT #1 [320, 2350] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 320-1189 bp Feature: domain Description: RVT_N Location: 437-680 bp Feature: domain Description: RVT_N Location: 437-680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728-1112 bp Feature: gene Location: 1152-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1422 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1683 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1683 bp Feature: gene Location: 1807-2124 bp Feature: domain Description: McrA Location: 1813-2095 bp Feature: domain Description: McrA Location: 1813-2095 bp Feature: gene Location: 2219-2350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010001569.1 Okeania sp. SIO3B3 3B3_NODE_1569, whole genome shotgun sequence (2616 bp)
Overview 1 RT 1: 1-2343 bp Neighborhood of RT #1 [1, 2354] RVT-GII RVT-GII GIIM McrA PulF Feature: gene Location: 1-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136 -337 bp Feature: domain Description: GIIM Note: maturase Location: 397-589 bp Feature: domain Description: GIIM Note: maturase Location: 397-589 bp Feature: domain Description: McrA Location: 652-895 bp Feature: domain Description: McrA Location: 6 52-895 bp Feature: gene Location: 1221-2354 bp Feature: domain Description: PulF Location: 1308-2343 bp Feature: domain Description: PulF Location: 1308-2343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), PulF (COG1459)

Seq: JAAHHF010001584.1 Okeania sp. SIO3B3 3B3_NODE_1584, whole genome shotgun sequence (2581 bp)
Overview 1 RT 1: 97-2504 bp Neighborhood of RT #1 [97, 2504] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 97-1590 bp Feature: domain Description: RVT_N Location: 121-367 bp Feature: domain Description: RVT_N Location: 121-367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844-1009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844-1009 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1192 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1192 bp Feature: domain Description: McrA Location: 1279-1564 bp Feature: domain Description: McrA Location: 127 9-1564 bp Feature: gene Location: 2286-2504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010000016.1 Okeania sp. SIO3B3 3B3_NODE_16, whole genome shotgun sequence (15741 bp)
Overview 1 RT 1: 1-3219 bp Neighborhood of RT #1 [1, 3219] PRK11893 RVT-GII GIIM HNHc Feature: gene Location: 1-696 bp Feature: domain Description: PRK11893 Location: 31-697 bp Feature: domain Description: PRK118 93 Location: 31-697 bp Feature: gene Location: 1090-2343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1639 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1924 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1924 bp Feature: domain Description: HNHc Note: nucleases Location: 2134-2308 bp Feature: domain Description: HNHc Note: nucleases Location: 2134-2308 bp Feature: gene Location: 2901-3044 bp Feature: gene Location: 3046-3219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11893 (methionyl-tRNA synthetase; Reviewed), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHF010001631.1 Okeania sp. SIO3B3 3B3_NODE_1631, whole genome shotgun sequence (2482 bp)
Overview 1 RT 1: 180-2406 bp Neighborhood of RT #1 [180, 2438] RVT_N RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 180-491 bp Feature: gene Location: 718-984 bp Feature: domain Description: RVT_N Location: 835-973 bp Feature: domain Description: RVT_N Location: 835-9 73 bp Feature: gene Location: 968-1561 bp Feature: domain Description: RVT_N Location: 974-1079 bp Feature: domain Description: RVT_N Location: 9 74-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1508 bp Feature: gene Location: 1656-2438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1665-1794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1665-179 4 bp Feature: domain Description: GIIM Note: maturase Location: 1866-2100 bp Feature: domain Description: GIIM Note: maturase Location: 1866-2100 bp Feature: domain Description: McrA Location: 2172-2406 bp Feature: domain Description: McrA Location: 2172-2406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010001658.1 Okeania sp. SIO3B3 3B3_NODE_1658, whole genome shotgun sequence (2420 bp)
Overview 1 RT 1: 81-2236 bp Neighborhood of RT #1 [81, 2236] YkfC RVT-GII GIIM Feature: gene Location: 81-1511 bp Feature: domain Description: YkfC Location: 135-309 bp Feature: domain Description: YkfC Location: 135-309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-10 38 bp Feature: domain Description: GIIM Note: maturase Location: 1116-1350 bp Feature: domain Description: GIIM Note: maturase Location: 1116-1350 bp Feature: gene Location: 2081-2236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010001678.1 Okeania sp. SIO3B3 3B3_NODE_1678, whole genome shotgun sequence (2396 bp)
Overview 1 RT 1: 3-1614 bp Neighborhood of RT #1 [3, 1619] RVT-GII RVT-GII GIIM McrA DUF2997 ycf35 Feature: gene Location: 3-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-312 bp Feature: domain Description: GIIM Note: maturase Location: 369-498 bp Feature: domain Description: GIIM Note: maturase Location: 369-498 bp Feature: domain Description: McrA Location: 579-867 bp Feature: domain Description: McrA Location: 579-867 bp Feature: gene Location: 1026-1187 bp Feature: domain Description: DUF2997 Location: 1032-1125 bp Feature: domain Description: DUF2997 Location: 1032-11 25 bp Feature: gene Location: 1233-1619 bp Feature: domain Description: ycf35 Location: 1236-1614 bp Feature: domain Description: ycf35 Location: 1236-1614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF2997 (pfam11211), ycf35 (CHL00193)

Seq: JAAHHF010001682.1 Okeania sp. SIO3B3 3B3_NODE_1682, whole genome shotgun sequence (2394 bp)
Overview 1 RT 1: 95-2275 bp Neighborhood of RT #1 [95, 2328] RVT_N RVT-GII RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 95-268 bp Feature: gene Location: 724-1089 bp Feature: domain Description: RVT_N Location: 778-937 bp Feature: domain Description: RVT_N Location: 778-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1060 bp Feature: gene Location: 1250-1456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 77-1427 bp Feature: gene Location: 1488-1823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1494-1605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1494-1605 bp Feature: domain Description: GIIM Note: maturase Location: 1662-1788 bp Feature: domain Description: GIIM Note: maturase Location: 1662-1788 bp Feature: gene Location: 1921-2328 bp Feature: domain Description: HNHc Note: nucleases Location: 2101-2275 bp Feature: domain Description: HNHc Note: nucleases Location: 2101-2275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHF010001690.1 Okeania sp. SIO3B3 3B3_NODE_1690, whole genome shotgun sequence (2379 bp)
Overview 1 RT 1: 452-2210 bp Neighborhood of RT #1 [452, 2377] RVT-GII RVT-GII GIIM Feature: gene Location: 452-631 bp Feature: gene Location: 855-1040 bp Feature: gene Location: 1078-1527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177-1492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177-1492 bp Feature: gene Location: 1499-2377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1502-1877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1502-1877 bp Feature: domain Description: GIIM Note: maturase Location: 1979-2210 bp Feature: domain Description: GIIM Note: maturase Location: 1979-2210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010001692.1 Okeania sp. SIO3B3 3B3_NODE_1692, whole genome shotgun sequence (2377 bp)
Overview 1 RT 1: 512-2374 bp Neighborhood of RT #1 [512, 2374] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 512-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524-950 bp Feature: domain Description: GIIM Note: maturase Location: 1007-1139 bp Feature: domain Description: GIIM Note: maturase Location: 1007-1139 bp Feature: gene Location: 1308-1739 bp Feature: domain Description: RVT_N Location: 1344-1587 bp Feature: domain Description: RVT_N Location: 1344-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-1707 bp Feature: gene Location: 2213-2374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: JAAHHF010000174.1 Okeania sp. SIO3B3 3B3_NODE_174, whole genome shotgun sequence (9787 bp)
Overview 1 RT 1: 1-1855 bp Neighborhood of RT #1 [1, 1893] RVT_N RVT-GII met_pdase_I RHH_5 Feature: gene Location: 1-678 bp Feature: domain Description: RVT_N Location: 28-265 bp Feature: domain Description: RVT_N Location: 28-265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325-655 bp Feature: gene Location: 1248-1430 bp Feature: domain Description: met_pdase_I Location: 1263-1389 bp Feature: domain Description: met_pdase_I Location: 1263-1389 bp Feature: gene Location: 1708-1893 bp Feature: domain Description: RHH_5 Location: 1732-1855 bp Feature: domain Description: RHH_5 Location: 1732-1855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, met_pdase_I (TIGR00500), RHH_5 (pfam07878)

Seq: JAAHHF010000177.1 Okeania sp. SIO3B3 3B3_NODE_177, whole genome shotgun sequence (9749 bp)
Overview 1 RT 1: 3-2967 bp Neighborhood of RT #1 [3, 2967] RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 3-386 bp Feature: gene Location: 588-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594-1113 bp Feature: domain Description: GIIM Note: maturase Location: 1170-1398 bp Feature: domain Description: GIIM Note: maturase Location: 1170-1398 bp Feature: domain Description: HNHc Note: nucleases Location: 1623-1782 bp Feature: domain Description: HNHc Note: nucleases Location: 16 23-1782 bp Feature: gene Location: 1822-2094 bp Feature: domain Description: RVT_N Location: 1852-1960 bp Feature: domain Description: RVT_N Location: 1852-1960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2002-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2002-2080 bp Feature: gene Location: 2512-2802 bp Feature: gene Location: 2812-2967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHF010001771.1 Okeania sp. SIO3B3 3B3_NODE_1771, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 1-2006 bp Neighborhood of RT #1 [1, 2017] RVT-GII GIIM dam Feature: gene Location: 1-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-319 bp Feature: domain Description: GIIM Note: maturase Location: 418-652 bp Feature: domain Description: GIIM Note: maturase Location: 418-652 bp Feature: gene Location: 1220-2017 bp Feature: domain Description: dam Location: 1265-2006 bp Feature: domain Description: dam Location: 1265-2006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), dam (TIGR00571)

Seq: JAAHHF010001784.1 Okeania sp. SIO3B3 3B3_NODE_1784, whole genome shotgun sequence (2187 bp)
Overview 1 RT 1: 1-1967 bp Neighborhood of RT #1 [1, 1999] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1-129 bp Feature: gene Location: 182-340 bp Feature: gene Location: 500-1999 bp Feature: domain Description: RVT_N Location: 524-770 bp Feature: domain Description: RVT_N Location: 524-770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 818-1238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 818 -1238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1670 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1670 bp Feature: domain Description: McrA Location: 1679-1967 bp Feature: domain Description: McrA Location: 1679-1967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010001819.1 Okeania sp. SIO3B3 3B3_NODE_1819, whole genome shotgun sequence (2124 bp)
Overview 1 RT 1: 3-1759 bp Neighborhood of RT #1 [3, 1836] RVT-GII RVT-GII GIIM HNH InsQ Feature: gene Location: 3-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69-381 bp Feature: gene Location: 670-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-766 bp Feature: domain Description: GIIM Note: maturase Location: 868-1048 bp Feature: domain Description: GIIM Note: maturase Location: 868-1048 bp Feature: gene Location: 1160-1576 bp Feature: domain Description: HNH Note: nucleases Location: 1325-1454 bp Feature: domain Description: HNH Note: nucleases Location: 1325-1454 bp Feature: gene Location: 1576-1836 bp Feature: domain Description: InsQ Location: 1678-1759 bp Feature: domain Description: InsQ Location: 1678-1759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), InsQ (COG0675)

Seq: JAAHHF010001873.1 Okeania sp. SIO3B3 3B3_NODE_1873, whole genome shotgun sequence (2025 bp)
Overview 1 RT 1: 142-2024 bp Neighborhood of RT #1 [142, 2024] RVT_N RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 142-408 bp Feature: domain Description: RVT_N Location: 259-397 bp Feature: domain Description: RVT_N Location: 259-397 bp Feature: gene Location: 392-976 bp Feature: domain Description: RVT_N Location: 398-503 bp Feature: domain Description: RVT_N Location: 398-503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-932 bp Feature: gene Location: 1063-1518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1243 bp Feature: domain Description: GIIM Note: maturase Location: 1315-1504 bp Feature: domain Description: GIIM Note: maturase Location: 1315-1504 bp Feature: gene Location: 1875-2024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010001886.1 Okeania sp. SIO3B3 3B3_NODE_1886, whole genome shotgun sequence (1999 bp)
Overview 1 RT 1: 349-1997 bp Neighborhood of RT #1 [349, 1996] RVT_N RVT-GII Feature: gene Location: 349-477 bp Feature: gene Location: 802-1047 bp Feature: gene Location: 1547-1996 bp Feature: domain Description: RVT_N Location: 1586-1832 bp Feature: domain Description: RVT_N Location: 1586-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1874-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1874-1997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010001927.1 Okeania sp. SIO3B3 3B3_NODE_1927, whole genome shotgun sequence (1933 bp)
Overview 1 RT 1: 117-1813 bp Neighborhood of RT #1 [117, 1932] RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 117-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-441 bp Feature: domain Description: GIIM Note: maturase Location: 501-726 bp Feature: domain Description: GIIM Note: maturase Location: 501-726 bp Feature: domain Description: HNHc Note: nucleases Location: 948-1110 bp Feature: domain Description: HNHc Note: nucleases Location: 948-1110 bp Feature: gene Location: 1255-1932 bp Feature: domain Description: RVT_N Location: 1258-1408 bp Feature: domain Description: RVT_N Location: 1258-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHF010001935.1 Okeania sp. SIO3B3 3B3_NODE_1935, whole genome shotgun sequence (1923 bp)
Overview 1 RT 1: 198-1911 bp Neighborhood of RT #1 [198, 1922] RVT_N RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 198-464 bp Feature: domain Description: RVT_N Location: 315-453 bp Feature: domain Description: RVT_N Location: 315-453 bp Feature: gene Location: 448-1050 bp Feature: domain Description: RVT_N Location: 454-559 bp Feature: domain Description: RVT_N Location: 454-559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-988 bp Feature: gene Location: 1052-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1091-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1091-1298 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1559 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1559 bp Feature: gene Location: 1587-1922 bp Feature: domain Description: McrA Location: 1602-1911 bp Feature: domain Description: McrA Location: 1602-1911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010001946.1 Okeania sp. SIO3B3 3B3_NODE_1946, whole genome shotgun sequence (1902 bp)
Overview 1 RT 1: 630-1898 bp Neighborhood of RT #1 [630, 1900] CYTH RVT_N RVT-GII Feature: gene Location: 630-791 bp Feature: domain Description: CYTH Location: 633-729 bp Feature: domain Description: CYTH Location: 633-729 bp Feature: gene Location: 826-1002 bp Feature: gene Location: 1319-1900 bp Feature: domain Description: RVT_N Location: 1436-1679 bp Feature: domain Description: RVT_N Location: 1436-1679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727-1898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CYTH (pfam01928), RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010001950.1 Okeania sp. SIO3B3 3B3_NODE_1950, whole genome shotgun sequence (1898 bp)
Overview 1 RT 1: 3-1847 bp Neighborhood of RT #1 [3, 1847] RVT-GII GIIM HNHc Feature: gene Location: 3-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-417 bp Feature: domain Description: GIIM Note: maturase Location: 474-702 bp Feature: domain Description: GIIM Note: maturase Location: 474-702 bp Feature: domain Description: HNHc Note: nucleases Location: 924-1083 bp Feature: domain Description: HNHc Note: nucleases Location: 924-1083 bp Feature: gene Location: 1248-1448 bp Feature: gene Location: 1572-1847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHF010002027.1 Okeania sp. SIO3B3 3B3_NODE_2027, whole genome shotgun sequence (1773 bp)
Overview 1 RT 1: 3-1676 bp Neighborhood of RT #1 [3, 1771] RVT_N RVT-GII McrA Feature: gene Location: 3-692 bp Feature: domain Description: RVT_N Location: 51-294 bp Feature: domain Description: RVT_N Location: 51-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-690 bp Feature: gene Location: 1346-1771 bp Feature: domain Description: McrA Location: 1403-1676 bp Feature: domain Description: McrA Location: 1403-1676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: JAAHHF010002068.1 Okeania sp. SIO3B3 3B3_NODE_2068, whole genome shotgun sequence (1704 bp)
Overview 1 RT 1: 142-1702 bp Neighborhood of RT #1 [142, 1701] RVT_N RVT_N RVT-GII Feature: gene Location: 142-324 bp Feature: domain Description: RVT_N Location: 259-310 bp Feature: domain Description: RVT_N Location: 259-310 bp Feature: gene Location: 940-1701 bp Feature: domain Description: RVT_N Location: 1000-1243 bp Feature: domain Description: RVT_N Location: 1000-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285-1702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285-1702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010002122.1 Okeania sp. SIO3B3 3B3_NODE_2122, whole genome shotgun sequence (1620 bp)
Overview 1 RT 1: 294-1572 bp Neighborhood of RT #1 [294, 1619] McrA RVT-GII GIIM RVT-GII Feature: gene Location: 294-605 bp Feature: domain Description: McrA Location: 336-573 bp Feature: domain Description: McrA Location: 336-573 bp Feature: gene Location: 664-1119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 676-844 bp Feature: domain Description: GIIM Note: maturase Location: 916-1105 bp Feature: domain Description: GIIM Note: maturase Location: 916-1105 bp Feature: gene Location: 1209-1619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1215-1572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1215-1572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010002174.1 Okeania sp. SIO3B3 3B3_NODE_2174, whole genome shotgun sequence (1537 bp)
Overview 1 RT 1: 2-1353 bp Neighborhood of RT #1 [2, 1385] RVT-GII RVT-GII GIIM McrA Feature: gene Location: 2-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-455 bp Feature: gene Location: 621-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-741 bp Feature: domain Description: GIIM Note: maturase Location: 813-1047 bp Feature: domain Description: GIIM Note: maturase Location: 813-1047 bp Feature: domain Description: McrA Location: 1131-1353 bp Feature: domain Description: McrA Location: 1131-1353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010002222.1 Okeania sp. SIO3B3 3B3_NODE_2222, whole genome shotgun sequence (1471 bp)
Overview 1 RT 1: 3-986 bp Neighborhood of RT #1 [3, 1000] RVT-GII RVT-GII GIIM Feature: gene Location: 3-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-414 bp Feature: gene Location: 545-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557-725 bp Feature: domain Description: GIIM Note: maturase Location: 800-986 bp Feature: domain Description: GIIM Note: maturase Location: 800-986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010002237.1 Okeania sp. SIO3B3 3B3_NODE_2237, whole genome shotgun sequence (1449 bp)
Overview 1 RT 1: 664-1301 bp Neighborhood of RT #1 [664, 1336] RVT_N RVT-GII Feature: gene Location: 664-831 bp Feature: gene Location: 851-1336 bp Feature: domain Description: RVT_N Location: 857-944 bp Feature: domain Description: RVT_N Location: 857-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986-1301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986-1301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010002263.1 Okeania sp. SIO3B3 3B3_NODE_2263, whole genome shotgun sequence (1407 bp)
Overview 1 RT 1: 2-1390 bp Neighborhood of RT #1 [2, 1404] RVT-GII GIIM Feature: gene Location: 2-151 bp Feature: gene Location: 511-1404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1132 bp Feature: domain Description: GIIM Note: maturase Location: 1204-1390 bp Feature: domain Description: GIIM Note: maturase Location: 1204-1390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010002449.1 Okeania sp. SIO3B3 3B3_NODE_2449, whole genome shotgun sequence (1167 bp)
Overview 1 RT 1: 11-587 bp Neighborhood of RT #1 [11, 991] RVT-GII GIIM Feature: gene Location: 11-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65-281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65-281 bp Feature: domain Description: GIIM Note: maturase Location: 353-587 bp Feature: domain Description: GIIM Note: maturase Location: 353-587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010002462.1 Okeania sp. SIO3B3 3B3_NODE_2462, whole genome shotgun sequence (1154 bp)
Overview 1 RT 1: 111-849 bp Neighborhood of RT #1 [111, 866] RVT_N RVT-GII Feature: gene Location: 111-866 bp Feature: domain Description: RVT_N Location: 228-471 bp Feature: domain Description: RVT_N Location: 228-471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHHF010002478.1 Okeania sp. SIO3B3 3B3_NODE_2478, whole genome shotgun sequence (1129 bp)
Overview 1 RT 1: 77-1106 bp Neighborhood of RT #1 [77, 1126] RVT-GII GIIM McrA Feature: gene Location: 77-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-548 bp Feature: domain Description: GIIM Note: maturase Location: 608-731 bp Feature: domain Description: GIIM Note: maturase Location: 608-731 bp Feature: domain Description: McrA Location: 863-1106 bp Feature: domain Description: McrA Location: 863-1106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010002517.1 Okeania sp. SIO3B3 3B3_NODE_2517, whole genome shotgun sequence (1079 bp)
Overview 1 RT 1: 98-1046 bp Neighborhood of RT #1 [98, 1078] RVT-GII GIIM McrA Feature: gene Location: 98-1078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-434 bp Feature: domain Description: GIIM Note: maturase Location: 506-740 bp Feature: domain Description: GIIM Note: maturase Location: 506-740 bp Feature: domain Description: McrA Location: 824-1046 bp Feature: domain Description: McrA Location: 824-1046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHF010002546.1 Okeania sp. SIO3B3 3B3_NODE_2546, whole genome shotgun sequence (1029 bp)
Overview 1 RT 1: 1-792 bp Neighborhood of RT #1 [1, 1028] PRK02813 RVT-Retrons Feature: gene Location: 1-444 bp Feature: domain Description: PRK02813 Location: 19-442 bp Feature: domain Description: PRK02813 Location: 19-442 bp Feature: gene Location: 600-1028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 603-792 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 603-792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02813 (putative aminopeptidase 2; Provisional), RVT-Retrons

Seq: JAAHHF010000026.1 Okeania sp. SIO3B3 3B3_NODE_26, whole genome shotgun sequence (20269 bp)
Overview 1 RT 1: 6061-14599 bp Neighborhood of RT #1 [6061, 14709] PRK09776 PRK11107 RVT-UG19 NERD UvrD UvrD PBP2_HuPBGD_like Feature: gene Location: 6061-6444 bp Feature: domain Description: PRK09776 Location: 6085-6412 bp Feature: domain Description: PRK09776 Location: 6085-6412 bp Feature: gene Location: 6917-8185 bp Feature: domain Description: PRK11107 Location: 6920-8180 bp Feature: domain Description: PRK11107 Location: 6920-8180 bp Feature: gene Location: 9863-11590 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 10358-10787 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 10358-10787 bp Feature: gene Location: 11619-13250 bp Feature: domain Description: NERD Location: 11667-11955 bp Feature: domain Description: NERD Location: 11667-11955 bp Feature: domain Description: UvrD Location: 12273-12366 bp Feature: domain Description: UvrD Location: 12273-12366 bp Feature: domain Description: UvrD Location: 12552-12969 bp Feature: domain Description: UvrD Location: 12552-12969 bp Feature: gene Location: 13747-14709 bp Feature: domain Description: PBP2_HuPBGD_like Location: 13777-14599 bp Feature: domain Description: PBP2_HuPBGD_like Location: 13777-14599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09776 (putative diguanylate cyclase; Provisional), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), RVT-UG19, NERD (pfam08378), UvrD (COG0210), PBP2_HuPBGD_like (cd13645)

Seq: JAAHHF010000316.1 Okeania sp. SIO3B3 3B3_NODE_316, whole genome shotgun sequence (7698 bp)
Overview 1 RT 1: 3956-7040 bp Neighborhood of RT #1 [3956, 7063] DUF2059 RVT_N RVT-GII YkfC HNHc Feature: gene Location: 3956-4084 bp Feature: gene Location: 4390-4989 bp Feature: domain Description: DUF2059 Location: 4777-4927 bp Feature: domain Description: DUF2059 Location: 4777-4927 bp Feature: gene Location: 5411-7063 bp Feature: domain Description: RVT_N Location: 5462-5705 bp Feature: domain Description: RVT_N Location: 5462-5705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5747-6371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5747-6371 bp Feature: domain Description: YkfC Location: 6377-6650 bp Feature: domain Description: YkfC Location: 6377-6650 bp Feature: domain Description: HNHc Note: nucleases Location: 6878-7040 bp Feature: domain Description: HNHc Note: nucleases Location: 6878-7040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2059 (pfam09832), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: JAAHHF010000033.1 Okeania sp. SIO3B3 3B3_NODE_33, whole genome shotgun sequence (18450 bp)
Overview 1 RT 1: 12324-17619 bp Neighborhood of RT #1 [12324, 17639] Uma2 DUF1848 RVT-UG25 PDDEXK_2 DUF4351 PIN_VapC4-5_FitB-like Feature: gene Location: 12324-12959 bp Feature: domain Description: Uma2 Location: 12378-12897 bp Feature: domain Description: Uma2 Location: 12378-12897 bp Feature: gene Location: 13452-13796 bp Feature: domain Description: DUF1848 Location: 13461-13623 bp Feature: domain Description: DUF1848 Location: 13461-13623 bp Feature: gene Location: 14065-16047 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 14464-14875 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 14464-14875 bp Feature: gene Location: 16109-17017 bp Feature: domain Description: PDDEXK_2 Location: 16127-16799 bp Feature: domain Description: PDDEXK_2 Location: 16127-16799 bp Feature: domain Description: DUF4351 Location: 16832-17006 bp Feature: domain Description: DUF4351 Location: 16832-17006 bp Feature: gene Location: 17202-17639 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 17244-17619 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 17244-17619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), DUF1848 (pfam08902), RVT-UG25, PDDEXK_2 (pfam12784), DUF4351 (pfam14261), PIN_VapC4-5_FitB-like (cd18754)

Seq: JAAHHF010000340.1 Okeania sp. SIO3B3 3B3_NODE_340, whole genome shotgun sequence (7455 bp)
Overview 1 RT 1: 3299-7349 bp Neighborhood of RT #1 [3299, 7349] Excalibur Excalibur CADG VWA Excalibur RVT-UG4 Feature: gene Location: 3299-4498 bp Feature: domain Description: Excalibur Location: 3980-4082 bp Feature: domain Description: Excalibur Location: 3980-4082 bp Feature: domain Description: Excalibur Location: 4106-4208 bp Feature: domain Description: Excalibur Location: 41 06-4208 bp Feature: domain Description: CADG Location: 4244-4496 bp Feature: domain Description: CADG Location: 4244-4496 bp Feature: gene Location: 4581-5690 bp Feature: domain Description: VWA Location: 4818-5175 bp Feature: domain Description: VWA Location: 4818-5175 bp Feature: domain Description: Excalibur Location: 5586-5688 bp Feature: domain Description: Excalibur Location: 5586-5688 bp Feature: gene Location: 5785-6696 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5923-6373 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5923-6373 bp Feature: gene Location: 7209-7349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Excalibur (smart00894), CADG (smart00736), VWA (smart00327), RVT-UG4

Seq: JAAHHF010000341.1 Okeania sp. SIO3B3 3B3_NODE_341, whole genome shotgun sequence (7446 bp)
Overview 1 RT 1: 1091-7058 bp Neighborhood of RT #1 [1091, 7084] RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 1091-1234 bp Feature: gene Location: 1274-2911 bp Feature: gene Location: 3672-4589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3717-3903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3717-3903 bp Feature: domain Description: GIIM Note: maturase Location: 3960-4188 bp Feature: domain Description: GIIM Note: maturase Location: 3960-4188 bp Feature: domain Description: HNHc Note: nucleases Location: 4413-4572 bp Feature: domain Description: HNHc Note: nucleases Location: 4413-4572 bp Feature: gene Location: 4911-5111 bp Feature: gene Location: 5127-5306 bp Feature: domain Description: RVT_N Location: 5163-5262 bp Feature: domain Description: RVT_N Location: 5163-5262 bp Feature: gene Location: 5449-6249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5461-5557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5461-5557 bp Feature: domain Description: GIIM Note: maturase Location: 5614-5842 bp Feature: domain Description: GIIM Note: maturase Location: 5614-5842 bp Feature: domain Description: HNHc Note: nucleases Location: 6040-6226 bp Feature: domain Description: HNHc Note: nucleases Location: 6040-6226 bp Feature: gene Location: 6323-7084 bp Feature: domain Description: RVT_N Location: 6449-6596 bp Feature: domain Description: RVT_N Location: 6449-6596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6638-7058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6638-7058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JAAHHF010000367.1 Okeania sp. SIO3B3 3B3_NODE_367, whole genome shotgun sequence (7226 bp)
Overview 1 RT 1: 3259-7184 bp Neighborhood of RT #1 [3259, 7184] ComFB HMP-P_kinase RVT_N RVT-GII GIIM RVT_N Feature: gene Location: 3259-3687 bp Feature: domain Description: ComFB Location: 3295-3529 bp Feature: domain Description: ComFB Location: 3295-3529 bp Feature: gene Location: 4052-4702 bp Feature: domain Description: HMP-P_kinase Location: 4061-4688 bp Feature: domain Description: HMP-P_kinase Location: 4061-4688 bp Feature: gene Location: 5293-6420 bp Feature: domain Description: RVT_N Location: 5299-5404 bp Feature: domain Description: RVT_N Location: 5299-5404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5452-6145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5452-6145 bp Feature: domain Description: GIIM Note: maturase Location: 6220-6406 bp Feature: domain Description: GIIM Note: maturase Location: 6220-6406 bp Feature: gene Location: 6404-6670 bp Feature: domain Description: RVT_N Location: 6521-6659 bp Feature: domain Description: RVT_N Location: 6521-6659 bp Feature: gene Location: 6954-7184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComFB (pfam10719), HMP-P_kinase (TIGR00097), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000441.1 Okeania sp. SIO3B3 3B3_NODE_441, whole genome shotgun sequence (6655 bp)
Overview 1 RT 1: 3006-6654 bp Neighborhood of RT #1 [3006, 6653] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 3006-3869 bp Feature: gene Location: 4992-5186 bp Feature: gene Location: 5255-6181 bp Feature: domain Description: RVT_N Location: 5372-5615 bp Feature: domain Description: RVT_N Location: 5372-5615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5663-6044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5663-6044 bp Feature: gene Location: 6132-6653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6141-6354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6141-6354 bp Feature: domain Description: GIIM Note: maturase Location: 6426-6654 bp Feature: domain Description: GIIM Note: maturase Location: 6426-6654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000527.1 Okeania sp. SIO3B3 3B3_NODE_527, whole genome shotgun sequence (6057 bp)
Overview 1 RT 1: 2-2173 bp Neighborhood of RT #1 [2, 2173] RVT_N RVT-GII GIIM RVT_N Feature: gene Location: 2-1402 bp Feature: domain Description: RVT_N Location: 8-113 bp Feature: domain Description: RVT_N Location: 8-113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161-857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161-857 bp Feature: domain Description: GIIM Note: maturase Location: 929-1163 bp Feature: domain Description: GIIM Note: maturase Location: 929-1163 bp Feature: gene Location: 1386-1652 bp Feature: domain Description: RVT_N Location: 1503-1641 bp Feature: domain Description: RVT_N Location: 1503-1641 bp Feature: gene Location: 2009-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000562.1 Okeania sp. SIO3B3 3B3_NODE_562, whole genome shotgun sequence (5830 bp)
Overview 1 RT 1: 3-3590 bp Neighborhood of RT #1 [3, 3616] RVT-GII GIIM HNHc RVT_N RVT-GII InsQ Feature: gene Location: 3-155 bp Feature: gene Location: 183-398 bp Feature: gene Location: 648-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-870 bp Feature: domain Description: GIIM Note: maturase Location: 927-1155 bp Feature: domain Description: GIIM Note: maturase Location: 927-1155 bp Feature: domain Description: HNHc Note: nucleases Location: 1398-1539 bp Feature: domain Description: HNHc Note: nucleases Location: 1398-1539 bp Feature: gene Location: 1871-2317 bp Feature: domain Description: RVT_N Location: 1922-2162 bp Feature: domain Description: RVT_N Location: 1922-2162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2207-2285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2207-2285 bp Feature: gene Location: 2579-2710 bp Feature: gene Location: 2915-3616 bp Feature: domain Description: InsQ Location: 2927-3590 bp Feature: domain Description: InsQ Location: 2927-3590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), InsQ (COG0675)

Seq: JAAHHF010000581.1 Okeania sp. SIO3B3 3B3_NODE_581, whole genome shotgun sequence (5721 bp)
Overview 1 RT 1: 1-2433 bp Neighborhood of RT #1 [1, 2456] RVT_N RVT-GII GIIM HNHc YcgL Feature: gene Location: 1-1722 bp Feature: domain Description: RVT_N Location: 118-361 bp Feature: domain Description: RVT_N Location: 118-361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1102 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1408 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1408 bp Feature: domain Description: HNHc Note: nucleases Location: 1597-1714 bp Feature: domain Description: HNHc Note: nucleases Location: 1597-1714 bp Feature: gene Location: 2076-2216 bp Feature: gene Location: 2295-2456 bp Feature: domain Description: YcgL Location: 2304-2433 bp Feature: domain Description: YcgL Location: 2304-2433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YcgL (pfam05166)

Seq: JAAHHF010000596.1 Okeania sp. SIO3B3 3B3_NODE_596, whole genome shotgun sequence (5621 bp)
Overview 1 RT 1: 1452-5061 bp Neighborhood of RT #1 [1452, 5618] PRK14948 TPR RVT-Retrons Feature: gene Location: 1452-3491 bp Feature: domain Description: PRK14948 Location: 1455-3336 bp Feature: domain Description: PRK14948 Location: 1455-3336 bp Feature: gene Location: 3786-5618 bp Feature: domain Description: TPR Location: 3816-3987 bp Feature: domain Description: TPR Location: 3816-3987 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4437-5061 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4437-5061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14948 (DNA polymerase III subunit gamma/tau), TPR (smart00028), RVT-Retrons

Seq: JAAHHF010000655.1 Okeania sp. SIO3B3 3B3_NODE_655, whole genome shotgun sequence (5342 bp)
Overview 1 RT 1: 709-5341 bp Neighborhood of RT #1 [709, 5341] DDE_Tnp_4 RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 709-915 bp Feature: domain Description: DDE_Tnp_4 Location: 760-901 bp Feature: domain Description: DDE_Tnp_4 Location: 760-901 bp Feature: gene Location: 2768-3031 bp Feature: gene Location: 3611-4474 bp Feature: domain Description: RVT_N Location: 3728-3971 bp Feature: domain Description: RVT_N Location: 3728-3971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4019-4400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4019-4400 bp Feature: gene Location: 4531-4896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4543-4711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4543-4711 bp Feature: domain Description: GIIM Note: maturase Location: 4783-4894 bp Feature: domain Description: GIIM Note: maturase Location: 4783-4894 bp Feature: gene Location: 5192-5341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_4 (pfam13359), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000685.1 Okeania sp. SIO3B3 3B3_NODE_685, whole genome shotgun sequence (5216 bp)
Overview 1 RT 1: 2-4802 bp Neighborhood of RT #1 [2, 4810] RVT-GII RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII InsQ Feature: gene Location: 2-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-377 bp Feature: gene Location: 800-2485 bp Feature: domain Description: RVT_N Location: 836-1079 bp Feature: domain Description: RVT_N Location: 836-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1793 bp Feature: domain Description: GIIM Note: maturase Location: 1844-2078 bp Feature: domain Description: GIIM Note: maturase Location: 1844-2078 bp Feature: domain Description: HNHc Note: nucleases Location: 2306-2465 bp Feature: domain Description: HNHc Note: nucleases Location: 2306-2465 bp Feature: gene Location: 2602-2823 bp Feature: gene Location: 2935-3549 bp Feature: domain Description: RVT_N Location: 2995-3190 bp Feature: domain Description: RVT_N Location: 2995-3190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3232-3421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3232-3421 bp Feature: gene Location: 4439-4810 bp Feature: domain Description: InsQ Location: 4448-4802 bp Feature: domain Description: InsQ Location: 4448-4802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675)

Seq: JAAHHF010000842.1 Okeania sp. SIO3B3 3B3_NODE_842, whole genome shotgun sequence (4569 bp)
Overview 1 RT 1: 3-1754 bp Neighborhood of RT #1 [3, 1754] RVT-GII GIIM HNH Feature: gene Location: 3-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-417 bp Feature: domain Description: GIIM Note: maturase Location: 474-702 bp Feature: domain Description: GIIM Note: maturase Location: 474-702 bp Feature: domain Description: HNH Note: nucleases Location: 951-1086 bp Feature: domain Description: HNH Note: nucleases Location: 951 -1086 bp Feature: gene Location: 1294-1449 bp Feature: gene Location: 1491-1754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHHF010000924.1 Okeania sp. SIO3B3 3B3_NODE_924, whole genome shotgun sequence (4284 bp)
Overview 1 RT 1: 1847-4182 bp Neighborhood of RT #1 [1847, 4244] InsQ GIIM McrA RVT-GII Feature: gene Location: 1847-2788 bp Feature: domain Description: InsQ Location: 1973-2690 bp Feature: domain Description: InsQ Location: 1973-2690 bp Feature: gene Location: 2812-3597 bp Feature: domain Description: GIIM Note: maturase Location: 2974-3196 bp Feature: domain Description: GIIM Note: maturase Location: 2974-3196 bp Feature: domain Description: McrA Location: 3253-3550 bp Feature: domain Description: McrA Location: 3253-3550 bp Feature: gene Location: 3717-4244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3723-4182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3723-4182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), GIIM (pfam08388), McrA (COG4058), RVT-GII

Seq: JAAHHF010000925.1 Okeania sp. SIO3B3 3B3_NODE_925, whole genome shotgun sequence (4279 bp)
Overview 1 RT 1: 1900-3851 bp Neighborhood of RT #1 [1900, 4066] CheW OmpR RVT-GII Feature: gene Location: 1900-2418 bp Feature: domain Description: CheW Location: 1978-2404 bp Feature: domain Description: CheW Location: 1978-2404 bp Feature: gene Location: 2435-2800 bp Feature: domain Description: OmpR Location: 2444-2798 bp Feature: domain Description: OmpR Location: 2444-2798 bp Feature: gene Location: 3707-4066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3713-3851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3713-3851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheW (smart00260), OmpR (COG0745), RVT-GII

Seq: JAAHHF010000960.1 Okeania sp. SIO3B3 3B3_NODE_960, whole genome shotgun sequence (4186 bp)
Overview 1 RT 1: 98-4078 bp Neighborhood of RT #1 [98, 4185] McrA RVT_N RVT-GII RVT_N RVT_N RVT-GII GIIM McrA Feature: gene Location: 98-523 bp Feature: domain Description: McrA Location: 266-491 bp Feature: domain Description: McrA Location: 266-491 bp Feature: gene Location: 986-1594 bp Feature: domain Description: RVT_N Location: 992-1097 bp Feature: domain Description: RVT_N Location: 992-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1145-1526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1145-1526 bp Feature: gene Location: 1578-1844 bp Feature: domain Description: RVT_N Location: 1695-1833 bp Feature: domain Description: RVT_N Location: 1695-1833 bp Feature: gene Location: 2272-2433 bp Feature: gene Location: 2587-4185 bp Feature: domain Description: RVT_N Location: 2590-2686 bp Feature: domain Description: RVT_N Location: 2590-2686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2734-3403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2734-3403 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3709 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3709 bp Feature: domain Description: McrA Location: 3793-4078 bp Feature: domain Description: McrA Location: 3793-4078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHF010000992.1 Okeania sp. SIO3B3 3B3_NODE_992, whole genome shotgun sequence (4069 bp)
Overview 1 RT 1: 2312-4067 bp Neighborhood of RT #1 [2312, 4066] RVT_N RVT-GII Feature: gene Location: 2312-2455 bp Feature: gene Location: 2605-2754 bp Feature: gene Location: 3284-4066 bp Feature: domain Description: RVT_N Location: 3401-3644 bp Feature: domain Description: RVT_N Location: 3401-3644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692-4067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692-4067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII