myRT

myRT report for GCA_010692555.1_ASM1069255v1

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Seq: JAAHHG010000001.1 Okeania sp. SIO3B5 3B5_NODE_1, whole genome shotgun sequence (75106 bp)
Overview 1 RT 1: 72392-74627 bp Neighborhood of RT #1 [72392, 74845] HNHc RVT_N RVT-GII Feature: gene Location: 72392-72658 bp Feature: gene Location: 73218-73676 bp Feature: domain Description: HNHc Note: nucleases Location: 73473-73632 bp Feature: domain Description: HNHc Note: nucleases Location: 73473-73632 bp Feature: gene Location: 73712-74845 bp Feature: domain Description: RVT_N Location: 73718-73913 bp Feature: domain Description: RVT_N Location: 7371 8-7391 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73955-74627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73955-74627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), RVT_N (pfam13655), RVT-GII

Seq: JAAHHG010000103.1 Okeania sp. SIO3B5 3B5_NODE_103, whole genome shotgun sequence (26185 bp)
Overview 1 RT 1: 1365-6325 bp Neighborhood of RT #1 [1365, 6351] PRK05443 RVT-UG4 RVT-UG4 HTH_Tnp_4 DDE_Tnp_4 Feature: gene Location: 1365-3536 bp Feature: domain Description: PRK05443 Location: 1401-3525 bp Feature: domain Description: PRK05443 Location: 1401-352 5 bp Feature: gene Location: 3623-3784 bp Feature: gene Location: 3786-4469 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4134-4401 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4134-4401 bp Feature: gene Location: 4462-4830 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4465-4618 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4465-4618 bp Feature: gene Location: 4909-5442 bp Feature: gene Location: 5953-6351 bp Feature: domain Description: HTH_Tnp_4 Location: 5956-6073 bp Feature: domain Description: HTH_Tnp_4 Location: 5956-6073 bp Feature: domain Description: DDE_Tnp_4 Location: 6157-6325 bp Feature: domain Description: DDE_Tnp_4 Location: 6157-632 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05443 (polyphosphate kinase; Provisional), RVT-UG4, HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)

Seq: JAAHHG010000108.1 Okeania sp. SIO3B5 3B5_NODE_108, whole genome shotgun sequence (25915 bp)
Overview 1 RT 1: 2930-7695 bp Neighborhood of RT #1 [2930, 7712] HpnB Caroten_synth RVT_N RVT-GII GIIM McrA COG2324 Feature: gene Location: 2930-4102 bp Feature: domain Description: HpnB Location: 3026-4067 bp Feature: domain Description: HpnB Location: 3 026-4067 bp Feature: gene Location: 4232-4777 bp Feature: domain Description: Caroten_synth Location: 4235-4649 bp Feature: domain Description: Caroten_synth Location: 423 5-4649 bp Feature: gene Location: 4893-6773 bp Feature: domain Description: RVT_N Location: 5010-5253 bp Feature: domain Description: RVT_N Location: 5010-5253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5301-5991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 01-5991 bp Feature: domain Description: GIIM Note: maturase Location: 6063-6297 bp Feature: domain Description: GIIM Note: maturase Location: 6063 -6297 bp Feature: domain Description: McrA Location: 6366-6660 bp Feature: domain Description: McrA Location: 63 66-6660 bp Feature: gene Location: 7128-7268 bp Feature: gene Location: 7347-7712 bp Feature: domain Description: COG2324 Location: 7350-7695 bp Feature: domain Description: COG23 24 Location: 73 50-7695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HpnB (TIGR03469), Caroten_synth (pfam04240), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), COG2324 (Uncharacterized membrane protein )

Seq: JAAHHG010000127.1 Okeania sp. SIO3B5 3B5_NODE_127, whole genome shotgun sequence (22760 bp)
Overview 1 RT 1: 489-8464 bp Neighborhood of RT #1 [489, 8697] FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind PRK12335 RVT_N RVT-GII GIIM McrA PRK02724 HAD-SF-IA-hyp1 Feature: gene Location: 489-3395 bp Feature: domain Description: FG-GAP Location: 564-606 bp Feature: domain Description: FG-GAP Location: 564 -606 bp Feature: domain Description: FG-GAP Location: 747-789 bp Feature: domain Description: FG-GAP Location: 74 7-789 bp Feature: domain Description: FG-GAP Location: 1122-1164 bp Feature: domain Description: FG-GAP Location: 1122-1164 bp Feature: domain Description: FG-GAP Location: 1308-1350 bp Feature: domain Description: FG-GAP Location: 1308-1350 bp Feature: domain Description: FG-GAP Location: 1476-1509 bp Feature: domain Description: FG-GAP Location: 14 76-1509 bp Feature: domain Description: HemolysinCabind Location: 1587-1668 bp Feature: domain Description: HemolysinCabind Location: 1587-1668 bp Feature: domain Description: HemolysinCabind Location: 1674-1776 bp Feature: domain Description: HemolysinCabind Location: 1674 -1776 bp Feature: domain Description: HemolysinCabind Location: 1782-1881 bp Feature: domain Description: HemolysinCabind Location: 1782-1881 bp Feature: domain Description: HemolysinCabind Location: 2892-2952 bp Feature: domain Description: HemolysinCabind Location: 2892-2952 bp Feature: domain Description: HemolysinCabind Location: 2997-3081 bp Feature: domain Description: HemolysinCabind Location: 2997-3081 bp Feature: domain Description: HemolysinCabind Location: 3129-3171 bp Feature: domain Description: HemolysinCabind Location: 3129-3171 bp Feature: gene Location: 3596-4669 bp Feature: domain Description: PRK12335 Location: 4055-4373 bp Feature: domain Description: PRK12335 Location: 4 055-4 373 bp Feature: gene Location: 5191-7050 bp Feature: domain Description: RVT_N Location: 5308-5551 bp Feature: domain Description: RVT_N Location: 5308-5551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5599-6268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5599-6268 bp Feature: domain Description: GIIM Note: maturase Location: 6340-6574 bp Feature: domain Description: GIIM Note: maturase Location: 634 0-6574 bp Feature: domain Description: McrA Location: 6658-6955 bp Feature: domain Description: McrA Location: 6658-6955 bp Feature: gene Location: 7625-7780 bp Feature: domain Description: PRK02724 Location: 7628-7763 bp Feature: domain Description: PRK02724 Location: 7628-7763 bp Feature: gene Location: 7855-8697 bp Feature: domain Description: HAD-SF-IA-hyp1 Location: 7870-8464 bp Feature: domain Description: HAD-SF-IA-hyp1 Location: 7870-84 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FG-GAP (pfam01839), HemolysinCabind (pfam00353), PRK12335 (tellurite resistance protein TehB; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK02724 (30S ribosomal protein PSRP-3), HAD-SF-IA-hyp1 (TIGR01548)

Seq: JAAHHG010000134.1 Okeania sp. SIO3B5 3B5_NODE_134, whole genome shotgun sequence (22086 bp)
Overview 1 RT 1: 267-7870 bp Neighborhood of RT #1 [267, 7870] KOG4626 KOG4626 KOG4626 PRK00702 RVT_N RVT-GII GIIM McrA RpiA Feature: gene Location: 267-3926 bp Feature: domain Description: KOG4626 Location: 273-918 bp Feature: domain Description: KOG4626 Location: 273-918 bp Feature: domain Description: KOG4626 Location: 1536-2454 bp Feature: domain Description: KOG4626 Location: 15 36-245 4 bp Feature: domain Description: KOG4626 Location: 2775-3915 bp Feature: domain Description: KOG4626 Location: 2775 -3915 bp Feature: gene Location: 4044-4400 bp Feature: domain Description: PRK00702 Location: 4071-4380 bp Feature: domain Description: PRK00702 Location: 4071-4380 bp Feature: gene Location: 4970-6826 bp Feature: domain Description: RVT_N Location: 5087-5330 bp Feature: domain Description: RVT_N Location: 5 087-5 330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5378-6044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 378-6044 bp Feature: domain Description: GIIM Note: maturase Location: 6116-6350 bp Feature: domain Description: GIIM Note: maturase Location: 6116-635 0 bp Feature: domain Description: McrA Location: 6428-6716 bp Feature: domain Description: McrA Location: 6428-6716 bp Feature: gene Location: 6909-7271 bp Feature: domain Description: RpiA Location: 6912-7236 bp Feature: domain Description: RpiA Location: 6912-7236 bp Feature: gene Location: 7706-7870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4626 (KOG4626, O-linked N-acetylglucosamine transferase OGT ), PRK00702 (ribose-5-phosphate isomerase RpiA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RpiA (COG0120)

Seq: JAAHHG010000164.1 Okeania sp. SIO3B5 3B5_NODE_164, whole genome shotgun sequence (19299 bp)
Overview 1 RT 1: 13142-18675 bp Neighborhood of RT #1 [13142, 18797] InsQ RVT_N RVT-GII RVT_N RVT-GII GIIM HNHc RVT-GII GIIM HNH Feature: gene Location: 13142-13369 bp Feature: gene Location: 13386-13811 bp Feature: domain Description: InsQ Location: 13392-13767 bp Feature: domain Description: InsQ Location: 13392-1376 7 bp Feature: gene Location: 14456-15070 bp Feature: domain Description: RVT_N Location: 14516-14711 bp Feature: domain Description: RVT_N Location: 14516 -14711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14753-14939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14753-14939 bp Feature: gene Location: 15182-15403 bp Feature: gene Location: 15508-17205 bp Feature: domain Description: RVT_N Location: 15556-15799 bp Feature: domain Description: RVT_N Location: 15556 -15799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15850-16513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15850-16 513 bp Feature: domain Description: GIIM Note: maturase Location: 16564-16798 bp Feature: domain Description: GIIM Note: maturase Location: 16 56 4-16 798 bp Feature: domain Description: HNHc Note: nucleases Location: 17026-17185 bp Feature: domain Description: HNHc Note: nucleases Location: 17026 -17185 bp Feature: gene Location: 17461-18156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17464-17836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1746 4-17836 bp Feature: domain Description: GIIM Note: maturase Location: 17938-18142 bp Feature: domain Description: GIIM Note: maturase Location: 17938-18142 bp Feature: gene Location: 18231-18515 bp Feature: gene Location: 18576-18797 bp Feature: domain Description: HNH Note: nucleases Location: 18585-18675 bp Feature: domain Description: HNH Note: nucleases Location: 18585-186 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HNH (pfam01844)

Seq: JAAHHG010000167.1 Okeania sp. SIO3B5 3B5_NODE_167, whole genome shotgun sequence (19160 bp)
Overview 1 RT 1: 6872-12889 bp Neighborhood of RT #1 [6872, 12978] VacB rps18 RVT_N RVT-GII GIIM McrA rpl33 RDD Feature: gene Location: 6872-8890 bp Feature: domain Description: VacB Location: 6938-8858 bp Feature: domain Description: VacB Location: 6938-8858 bp Feature: gene Location: 9200-9418 bp Feature: domain Description: rps18 Location: 9209-9413 bp Feature: domain Description: rps18 Location: 9209-9413 bp Feature: gene Location: 9683-11575 bp Feature: domain Description: RVT_N Location: 9800-10043 bp Feature: domain Description: RVT_N Location: 9800-10043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10091-10784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10091-107 84 bp Feature: domain Description: GIIM Note: maturase Location: 10859-11090 bp Feature: domain Description: GIIM Note: maturase Location: 10859-11090 bp Feature: domain Description: McrA Location: 11135-11459 bp Feature: domain Description: McrA Location: 11135-11459 bp Feature: gene Location: 12223-12411 bp Feature: domain Description: rpl33 Location: 12229-12409 bp Feature: domain Description: rpl33 Location: 12229-12409 bp Feature: gene Location: 12448-12978 bp Feature: domain Description: RDD Location: 12484-12889 bp Feature: domain Description: RDD Location: 12484-12889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VacB (COG0557), rps18 (CHL00077), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), rpl33 (CHL00104), RDD (pfam06271)

Seq: JAAHHG010000002.1 Okeania sp. SIO3B5 3B5_NODE_2, whole genome shotgun sequence (67445 bp)
Overview 1 RT 1: 42769-49908 bp Neighborhood of RT #1 [42769, 49916] DUF4948 ABC_perm_GldF RVT_N RVT-GII GIIM HNHc GldA_ABC_ATP PRK13612 Feature: gene Location: 42769-44085 bp Feature: domain Description: DUF4948 Location: 43558-43912 bp Feature: domain Description: DUF4948 Location: 43558 -43912 bp Feature: gene Location: 44374-45174 bp Feature: domain Description: ABC_perm_GldF Location: 44401-45151 bp Feature: domain Description: ABC_perm_GldF Location: 44401-45151 bp Feature: gene Location: 45870-47558 bp Feature: domain Description: RVT_N Location: 45891-46134 bp Feature: domain Description: RVT_N Location: 458 91-46134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46179-46866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46179-468 66 bp Feature: domain Description: GIIM Note: maturase Location: 46950-47181 bp Feature: domain Description: GIIM Note: maturase Location: 46950-4718 1 bp Feature: domain Description: HNHc Note: nucleases Location: 47352-47508 bp Feature: domain Description: HNHc Note: nucleases Location: 47352-47508 bp Feature: gene Location: 47870-48967 bp Feature: domain Description: GldA_ABC_ATP Location: 47876-48803 bp Feature: domain Description: GldA_ABC_ATP Location: 478 76-48 8 03 bp Feature: gene Location: 49581-49916 bp Feature: domain Description: PRK13612 Location: 49584-49908 bp Feature: domain Description: PRK13612 Location: 4958 4-49908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4948 (pfam16306), ABC_perm_GldF (TIGR03518), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), GldA_ABC_ATP (TIGR03522), PRK13612 (photosystem II reaction center protein Psb28; Provisional)

Seq: JAAHHG010000219.1 Okeania sp. SIO3B5 3B5_NODE_219, whole genome shotgun sequence (15569 bp)
Overview 1 RT 1: 8482-13861 bp Neighborhood of RT #1 [8482, 13872] RVT_N RVT-GII RVT-GII GIIM HNH RVT_N RVT-GII DUF1818 Feature: gene Location: 8482-8709 bp Feature: gene Location: 9227-9394 bp Feature: gene Location: 9660-10460 bp Feature: domain Description: RVT_N Location: 9696-9939 bp Feature: domain Description: RVT_N Location: 9 69 6-9 9 39 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9981-10428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 9 81-10428 bp Feature: gene Location: 10492-10827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10498-10609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049 8-10609 bp Feature: domain Description: GIIM Note: maturase Location: 10666-10792 bp Feature: domain Description: GIIM Note: maturase Location: 10666-1079 2 bp Feature: gene Location: 11151-11333 bp Feature: domain Description: HNH Note: nucleases Location: 11154-11286 bp Feature: domain Description: HNH Note: nucleases Location: 11154-11286 bp Feature: gene Location: 11413-12228 bp Feature: domain Description: RVT_N Location: 11530-11773 bp Feature: domain Description: RVT_N Location: 11530-11773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11821-12160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11821-12160 bp Feature: gene Location: 12257-12760 bp Feature: gene Location: 13507-13872 bp Feature: domain Description: DUF1818 Location: 13525-13861 bp Feature: domain Description: DUF1818 Location: 13525-13861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF1818 (pfam08848)

Seq: JAAHHG010000285.1 Okeania sp. SIO3B5 3B5_NODE_285, whole genome shotgun sequence (12865 bp)
Overview 1 RT 1: 10077-12863 bp Neighborhood of RT #1 [10077, 12862] tspaseT_teng_N InsQ OrfB_Zn_ribbon RVT_N RVT-GII RVT-GII Feature: gene Location: 10077-10787 bp Feature: domain Description: tspaseT_teng_N Location: 10137-10344 bp Feature: domain Description: tspaseT_teng_N Location: 10 137-10 344 bp Feature: domain Description: InsQ Location: 10380-10746 bp Feature: domain Description: InsQ Location: 10 380-10 746 bp Feature: gene Location: 11014-11295 bp Feature: domain Description: OrfB_Zn_ribbon Location: 11020-11191 bp Feature: domain Description: OrfB_Zn_ribbon Location: 110 20-11191 bp Feature: gene Location: 11779-12516 bp Feature: domain Description: RVT_N Location: 11878-12124 bp Feature: domain Description: RVT_N Location: 11878-12124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12166-12481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12166-12481 bp Feature: gene Location: 12488-12862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12491-12863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12491-12863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tspaseT_teng_N (TIGR01765), InsQ (COG0675), OrfB_Zn_ribbon (pfam07282), RVT_N (pfam13655), RVT-GII

Seq: JAAHHG010000292.1 Okeania sp. SIO3B5 3B5_NODE_292, whole genome shotgun sequence (12599 bp)
Overview 1 RT 1: 10512-12464 bp Neighborhood of RT #1 [10512, 12598] HTH_OrfB_IS605 RVT-GII RVT-GII GIIM Feature: gene Location: 10512-10721 bp Feature: gene Location: 11132-11470 bp Feature: domain Description: HTH_OrfB_IS605 Location: 11135-11267 bp Feature: domain Description: HTH_OrfB_IS605 Location: 11 135-11 267 bp Feature: gene Location: 11491-12030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11551-12001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 551-12001 bp Feature: gene Location: 12062-12598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12068-12179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12068-12179 bp Feature: domain Description: GIIM Note: maturase Location: 12236-12464 bp Feature: domain Description: GIIM Note: maturase Location: 12236-12464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_OrfB_IS605 (pfam12323), RVT-GII, GIIM (pfam08388)

Seq: JAAHHG010000032.1 Okeania sp. SIO3B5 3B5_NODE_32, whole genome shotgun sequence (47032 bp)
Overview 1 RT 1: 18819-25950 bp Neighborhood of RT #1 [18819, 25976] CE4_NodB_like_6s_7s PRK13477 RVT-GII GIIM McrA RVT_N RVT-GII RlpA Feature: gene Location: 18819-19832 bp Feature: domain Description: CE4_NodB_like_6s_7s Location: 19179-19701 bp Feature: domain Description: CE4_NodB_like_6s_7s Location: 19179-19701 bp Feature: gene Location: 20025-21593 bp Feature: domain Description: PRK13477 Location: 20028-21588 bp Feature: domain Description: PRK13477 Location: 20028-21588 bp Feature: gene Location: 22543-23424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22555-22723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22555-22723 bp Feature: domain Description: GIIM Note: maturase Location: 22795-23029 bp Feature: domain Description: GIIM Note: maturase Location: 22795-23029 bp Feature: domain Description: McrA Location: 23029-23395 bp Feature: domain Description: McrA Location: 23029-23395 bp Feature: gene Location: 23514-24344 bp Feature: domain Description: RVT_N Location: 23631-23874 bp Feature: domain Description: RVT_N Location: 23631-23874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23922-24300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23922-24300 bp Feature: gene Location: 24572-24847 bp Feature: gene Location: 24921-25976 bp Feature: domain Description: RlpA Location: 25647-25950 bp Feature: domain Description: RlpA Location: 25647-25950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CE4_NodB_like_6s_7s (cd10917), PRK13477 (bifunctional pantoate--beta-alanine ligase/(d)CMP kinase), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RlpA (COG0797)

Seq: JAAHHG010000330.1 Okeania sp. SIO3B5 3B5_NODE_330, whole genome shotgun sequence (11191 bp)
Overview 1 RT 1: 1-3516 bp Neighborhood of RT #1 [1, 3557] RVT_N RVT-GII sms Feature: gene Location: 1-633 bp Feature: domain Description: RVT_N Location: 4-103 bp Feature: domain Description: RVT_N Location: 4-103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163-631 bp Feature: gene Location: 1149-1283 bp Feature: gene Location: 1944-3557 bp Feature: domain Description: sms Location: 1947-3516 bp Feature: domain Description: sms Location: 1947-3516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, sms (TIGR00416)

Seq: JAAHHG010000331.1 Okeania sp. SIO3B5 3B5_NODE_331, whole genome shotgun sequence (11158 bp)
Overview 1 RT 1: 4106-10685 bp Neighborhood of RT #1 [4106, 10693] PIN_VapC4-5_FitB-like 2A0306 RVT-GII GIIM McrA RVT_N RVT-GII 2A0306 TldD Feature: gene Location: 4106-4525 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 4124-4520 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 4124-4520 bp Feature: gene Location: 4808-5848 bp Feature: domain Description: 2A0306 Location: 4811-5687 bp Feature: domain Description: 2A0306 Location: 4811-5687 bp Feature: gene Location: 5978-6898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5990-6158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5990-6158 bp Feature: domain Description: GIIM Note: maturase Location: 6230-6464 bp Feature: domain Description: GIIM Note: maturase Location: 6230-6464 bp Feature: domain Description: McrA Location: 6503-6833 bp Feature: domain Description: McrA Location: 6503-6833 bp Feature: gene Location: 6870-7793 bp Feature: domain Description: RVT_N Location: 6987-7230 bp Feature: domain Description: RVT_N Location: 6987-7230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7278-7767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7278-7767 bp Feature: gene Location: 8365-8622 bp Feature: domain Description: 2A0306 Location: 8383-8608 bp Feature: domain Description: 2A0306 Location: 8383-8608 bp Feature: gene Location: 9269-10693 bp Feature: domain Description: TldD Location: 9329-10685 bp Feature: domain Description: TldD Location: 9329-10685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), 2A0306 (TIGR00909), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), TldD (COG0312)

Seq: JAAHHG010000343.1 Okeania sp. SIO3B5 3B5_NODE_343, whole genome shotgun sequence (10723 bp)
Overview 1 RT 1: 660-5560 bp Neighborhood of RT #1 [660, 5586] dnaG RVT_N RVT-GII GIIM McrA dnaG Feature: gene Location: 660-800 bp Feature: gene Location: 1061-2893 bp Feature: domain Description: dnaG Location: 1064-2789 bp Feature: domain Description: dnaG Location: 1064-2789 bp Feature: gene Location: 2999-4858 bp Feature: domain Description: RVT_N Location: 3116-3359 bp Feature: domain Description: RVT_N Location: 3116-3359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3407-4076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3407-4076 bp Feature: domain Description: GIIM Note: maturase Location: 4148-4382 bp Feature: domain Description: GIIM Note: maturase Location: 4148-4382 bp Feature: domain Description: McrA Location: 4421-4763 bp Feature: domain Description: McrA Location: 4421-4763 bp Feature: gene Location: 5084-5359 bp Feature: gene Location: 5425-5586 bp Feature: domain Description: dnaG Location: 5440-5560 bp Feature: domain Description: dnaG Location: 5440-5560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHG010000352.1 Okeania sp. SIO3B5 3B5_NODE_352, whole genome shotgun sequence (10457 bp)
Overview 1 RT 1: 827-5902 bp Neighborhood of RT #1 [827, 5907] PRK12896 HTH_OrfB_IS605 RVT_N RVT-GII InsQ CitB Feature: gene Location: 827-1684 bp Feature: domain Description: PRK12896 Location: 896-1667 bp Feature: domain Description: PRK12896 Location: 896-16 67 bp Feature: gene Location: 2041-2484 bp Feature: domain Description: HTH_OrfB_IS605 Location: 2044-2173 bp Feature: domain Description: HTH_OrfB_IS605 Location: 2044-2173 bp Feature: gene Location: 3168-3857 bp Feature: domain Description: RVT_N Location: 3222-3465 bp Feature: domain Description: RVT_N Location: 3222-3465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516-3846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516 -3846 bp Feature: gene Location: 4060-5088 bp Feature: domain Description: InsQ Location: 4180-4924 bp Feature: domain Description: InsQ Location: 4180-4924 bp Feature: gene Location: 5164-5907 bp Feature: domain Description: CitB Location: 5227-5902 bp Feature: domain Description: CitB Location: 5227-5902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12896 (methionine aminopeptidase; Reviewed), HTH_OrfB_IS605 (pfam12323), RVT_N (pfam13655), RVT-GII, InsQ (COG0675), CitB (TIGR02484)

Seq: JAAHHG010000357.1 Okeania sp. SIO3B5 3B5_NODE_357, whole genome shotgun sequence (10393 bp)
Overview 1 RT 1: 1666-9039 bp Neighborhood of RT #1 [1666, 9059] AMIN HofQ HofQ HTH_OrfB_IS605 RVT_N RVT-GII GIIM HNHc InsQ BHL Feature: gene Location: 1666-4062 bp Feature: domain Description: AMIN Location: 1774-2053 bp Feature: domain Description: AMIN Location: 17 74-2053 bp Feature: domain Description: HofQ Location: 2206-3112 bp Feature: domain Description: HofQ Location: 2206-3112 bp Feature: domain Description: HofQ Location: 3433-3973 bp Feature: domain Description: HofQ Location: 3433-3973 bp Feature: gene Location: 4138-4452 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4189-4321 bp Feature: domain Description: HTH_OrfB_IS605 Location: 4189-4321 bp Feature: gene Location: 5058-6734 bp Feature: domain Description: RVT_N Location: 5109-5352 bp Feature: domain Description: RVT_N Location: 5109-5352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5394-6027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5394-6027 bp Feature: domain Description: GIIM Note: maturase Location: 6084-6312 bp Feature: domain Description: GIIM Note: maturase Location: 6084-6312 bp Feature: domain Description: HNHc Note: nucleases Location: 6540-6696 bp Feature: domain Description: HNHc Note: nucleases Location: 6540-6696 bp Feature: gene Location: 6909-8000 bp Feature: domain Description: InsQ Location: 6978-7716 bp Feature: domain Description: InsQ Location: 6978-7716 bp Feature: gene Location: 8772-9059 bp Feature: domain Description: BHL Location: 8775-9039 bp Feature: domain Description: BHL Location: 8775-9039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AMIN (pfam11741), HofQ (COG4796), HTH_OrfB_IS605 (pfam12323), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsQ (COG0675), BHL (smart00411)

Seq: JAAHHG010000037.1 Okeania sp. SIO3B5 3B5_NODE_37, whole genome shotgun sequence (45200 bp)
Overview 1 RT 1: 644-3677 bp Neighborhood of RT #1 [644, 3677] RVT_N RVT-GII GIIM Feature: gene Location: 644-2068 bp Feature: domain Description: RVT_N Location: 689-872 bp Feature: domain Description: RVT_N Location: 689-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1601 bp Feature: domain Description: GIIM Note: maturase Location: 1679-1913 bp Feature: domain Description: GIIM Note: maturase Location: 1679-1913 bp Feature: gene Location: 3064-3324 bp Feature: gene Location: 3531-3677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHG010000379.1 Okeania sp. SIO3B5 3B5_NODE_379, whole genome shotgun sequence (9889 bp)
Overview 1 RT 1: 1-6706 bp Neighborhood of RT #1 [1, 6729] RVT_N RVT_N RVT-GII RVT-GII GIIM HNHc RVT-GII RVT-GII GIIM McrA RRXRR pleD HATPase_c Feature: gene Location: 1-189 bp Feature: domain Description: RVT_N Location: 4-187 bp Feature: domain Description: RVT_N Location: 4-187 bp Feature: gene Location: 484-675 bp Feature: gene Location: 785-1630 bp Feature: domain Description: RVT_N Location: 845-1082 bp Feature: domain Description: RVT_N Location: 845-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1577 bp Feature: gene Location: 1698-2474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1704-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1704-1782 bp Feature: domain Description: GIIM Note: maturase Location: 1839-2067 bp Feature: domain Description: GIIM Note: maturase Location: 1839-2067 bp Feature: domain Description: HNHc Note: nucleases Location: 2277-2451 bp Feature: domain Description: HNHc Note: nucleases Location: 2277-2451 bp Feature: gene Location: 2616-3908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2679-3102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2679-3102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108-3273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108-3273 bp Feature: domain Description: GIIM Note: maturase Location: 3330-3453 bp Feature: domain Description: GIIM Note: maturase Location: 3330-3453 bp Feature: domain Description: McrA Location: 3549-3828 bp Feature: domain Description: McrA Location: 3549-3828 bp Feature: gene Location: 3970-4863 bp Feature: domain Description: RRXRR Location: 3973-4525 bp Feature: domain Description: RRXRR Location: 3973-4525 bp Feature: gene Location: 5524-6729 bp Feature: domain Description: pleD Location: 5584-6184 bp Feature: domain Description: pleD Location: 5584-6184 bp Feature: domain Description: HATPase_c Location: 6394-6706 bp Feature: domain Description: HATPase_c Location: 6394-6706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), McrA (COG4058), RRXRR (pfam14239), pleD (PRK09581), HATPase_c (smart00387)

Seq: JAAHHG010000040.1 Okeania sp. SIO3B5 3B5_NODE_40, whole genome shotgun sequence (43119 bp)
Overview 1 RT 1: 17922-22407 bp Neighborhood of RT #1 [17922, 22724] Gph GIIM McrA RVT_N RVT-GII Gph PRK07400 Feature: gene Location: 17922-18053 bp Feature: domain Description: Gph Location: 17928-18042 bp Feature: domain Description: Gph Location: 17928-18042 bp Feature: gene Location: 18232-19038 bp Feature: domain Description: GIIM Note: maturase Location: 18355-18589 bp Feature: domain Description: GIIM Note: maturase Location: 18355-18589 bp Feature: domain Description: McrA Location: 18628-18970 bp Feature: domain Description: McrA Location: 18628-18970 bp Feature: gene Location: 19194-20087 bp Feature: domain Description: RVT_N Location: 19311-19554 bp Feature: domain Description: RVT_N Location: 19311-19554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19602-19983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19602-19983 bp Feature: gene Location: 20659-21198 bp Feature: domain Description: Gph Location: 20695-21175 bp Feature: domain Description: Gph Location: 20 695-21175 bp Feature: gene Location: 21465-22724 bp Feature: domain Description: PRK07400 Location: 21474-22407 bp Feature: domain Description: PRK07400 Location: 21474-22407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gph (COG0546), GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RVT-GII, PRK07400 (30S ribosomal protein S1; Reviewed)

Seq: JAAHHG010000435.1 Okeania sp. SIO3B5 3B5_NODE_435, whole genome shotgun sequence (8539 bp)
Overview 1 RT 1: 2-2533 bp Neighborhood of RT #1 [2, 2694] RVT-GII GIIM RVT_N RVT-GII InsQ HTH_OrfB_IS605 Feature: gene Location: 2-538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-119 bp Feature: domain Description: GIIM Note: maturase Location: 176-404 bp Feature: domain Description: GIIM Note: maturase Location: 176-404 bp Feature: gene Location: 603-1385 bp Feature: domain Description: RVT_N Location: 654-894 bp Feature: domain Description: RVT_N Location: 654-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 939-1362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 939-1362 bp Feature: gene Location: 1983-2390 bp Feature: domain Description: InsQ Location: 2016-2364 bp Feature: domain Description: InsQ Location: 2016-2364 bp Feature: gene Location: 2392-2694 bp Feature: domain Description: HTH_OrfB_IS605 Location: 2395-2533 bp Feature: domain Description: HTH_OrfB_IS605 Location: 2395-2533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), InsQ (COG0675), HTH_OrfB_IS605 (pfam12323)

Seq: JAAHHG010000479.1 Okeania sp. SIO3B5 3B5_NODE_479, whole genome shotgun sequence (7685 bp)
Overview 1 RT 1: 885-5070 bp Neighborhood of RT #1 [885, 5099] PRK13197 PRK13197 RVT_N RVT-GII GIIM McrA hisH Feature: gene Location: 885-1394 bp Feature: domain Description: PRK13197 Location: 897-1137 bp Feature: domain Description: PRK13197 Location: 897-1137 bp Feature: domain Description: PRK13197 Location: 1215-1338 bp Feature: domain Description: PRK13197 Location: 1215-1338 bp Feature: gene Location: 1985-2158 bp Feature: gene Location: 2524-4407 bp Feature: domain Description: RVT_N Location: 2641-2884 bp Feature: domain Description: RVT_N Location: 2641-2884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932-3625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932-3625 bp Feature: domain Description: GIIM Note: maturase Location: 3697-3931 bp Feature: domain Description: GIIM Note: maturase Location: 3697-3931 bp Feature: domain Description: McrA Location: 3946-4315 bp Feature: domain Description: McrA Location: 3946-4315 bp Feature: gene Location: 4481-4666 bp Feature: gene Location: 4704-5099 bp Feature: domain Description: hisH Location: 4707-5070 bp Feature: domain Description: hisH Location: 4707-5070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13197 (pyrrolidone-carboxylate peptidase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), hisH (PRK14004)

Seq: JAAHHG010000050.1 Okeania sp. SIO3B5 3B5_NODE_50, whole genome shotgun sequence (37938 bp)
Overview 1 RT 1: 3-2738 bp Neighborhood of RT #1 [3, 2743] RVT-GII GIIM HNHc RVT_N RVT-GII Usp Feature: gene Location: 3-827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-141 bp Feature: domain Description: GIIM Note: maturase Location: 219-447 bp Feature: domain Description: GIIM Note: maturase Location: 219-447 bp Feature: domain Description: HNHc Note: nucleases Location: 633-741 bp Feature: domain Description: HNHc Note: nucleases Location: 633-741 bp Feature: gene Location: 832-1788 bp Feature: domain Description: RVT_N Location: 949-1192 bp Feature: domain Description: RVT_N Location: 949-1192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240-1753 bp Feature: gene Location: 2013-2174 bp Feature: gene Location: 2360-2743 bp Feature: domain Description: Usp Location: 2363-2738 bp Feature: domain Description: Usp Location: 23 63-2738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), Usp (pfam00582)

Seq: JAAHHG010000531.1 Okeania sp. SIO3B5 3B5_NODE_531, whole genome shotgun sequence (6843 bp)
Overview 1 RT 1: 3024-6578 bp Neighborhood of RT #1 [3024, 6622] TerD Def RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 3024-3596 bp Feature: domain Description: TerD Location: 3027-3588 bp Feature: domain Description: TerD Location: 3027-3588 bp Feature: gene Location: 4204-4611 bp Feature: domain Description: Def Location: 4210-4582 bp Feature: domain Description: Def Location: 4210-4582 bp Feature: gene Location: 4689-5699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4701-4869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4701-4869 bp Feature: domain Description: GIIM Note: maturase Location: 4941-5175 bp Feature: domain Description: GIIM Note: maturase Location: 4941-5175 bp Feature: domain Description: McrA Location: 5259-5547 bp Feature: domain Description: McrA Location: 5259-5547 bp Feature: gene Location: 5789-6622 bp Feature: domain Description: RVT_N Location: 5906-6149 bp Feature: domain Description: RVT_N Location: 5906-6149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6197-6578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6197-6578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TerD (pfam02342), Def (COG0242), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHG010000547.1 Okeania sp. SIO3B5 3B5_NODE_547, whole genome shotgun sequence (6541 bp)
Overview 1 RT 1: 3517-6491 bp Neighborhood of RT #1 [3517, 6538] DDE_5 TIGR02096 RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 3517-4056 bp Feature: domain Description: DDE_5 Location: 3520-3769 bp Feature: domain Description: DDE_5 Location: 3520-3769 bp Feature: gene Location: 4471-4701 bp Feature: domain Description: TIGR02096 Location: 4537-4675 bp Feature: domain Description: TIGR02096 Location: 4537-4675 bp Feature: gene Location: 4815-5786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4827-4995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4827-4995 bp Feature: domain Description: GIIM Note: maturase Location: 5067-5301 bp Feature: domain Description: GIIM Note: maturase Location: 5067-5301 bp Feature: domain Description: McrA Location: 5340-5682 bp Feature: domain Description: McrA Location: 5340-5682 bp Feature: gene Location: 5849-6538 bp Feature: domain Description: RVT_N Location: 5855-6062 bp Feature: domain Description: RVT_N Location: 5855-6062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6110-6491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6110-6491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), TIGR02096 (conserved hypothetical protein, steroid delta-isomerase-related), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHG010000569.1 Okeania sp. SIO3B5 3B5_NODE_569, whole genome shotgun sequence (6245 bp)
Overview 1 RT 1: 1488-4665 bp Neighborhood of RT #1 [1488, 4706] His_Phos_1 RVT_N RVT-GII GIIM HNHc His_Phos_1 Feature: gene Location: 1488-1844 bp Feature: domain Description: His_Phos_1 Location: 1530-1797 bp Feature: domain Description: His_Phos_1 Location: 1530-1797 bp Feature: gene Location: 1915-2055 bp Feature: gene Location: 2409-3275 bp Feature: domain Description: RVT_N Location: 2526-2769 bp Feature: domain Description: RVT_N Location: 2526 -2769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2817-3195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2817-3195 bp Feature: gene Location: 3457-4248 bp Feature: domain Description: GIIM Note: maturase Location: 3580-3814 bp Feature: domain Description: GIIM Note: maturase Location: 3580-3814 bp Feature: domain Description: HNHc Note: nucleases Location: 4003-4147 bp Feature: domain Description: HNHc Note: nucleases Location: 4003-4147 bp Feature: gene Location: 4377-4706 bp Feature: domain Description: His_Phos_1 Location: 4416-4665 bp Feature: domain Description: His_Phos_1 Location: 4416-4665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT His_Phos_1 (pfam00300), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHHG010000060.1 Okeania sp. SIO3B5 3B5_NODE_60, whole genome shotgun sequence (34342 bp)
Overview 1 RT 1: 29425-34185 bp Neighborhood of RT #1 [29425, 34340] AAA_16 HELICc RVT-GII GIIM McrA Feature: gene Location: 29425-31998 bp Feature: domain Description: AAA_16 Location: 29470-29671 bp Feature: domain Description: AAA_16 Location: 29470-29671 bp Feature: domain Description: HELICc Location: 30538-30865 bp Feature: domain Description: HELICc Location: 30538-30865 bp Feature: gene Location: 32022-32348 bp Feature: gene Location: 32694-34340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32808-33495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32808-33495 bp Feature: domain Description: GIIM Note: maturase Location: 33570-33804 bp Feature: domain Description: GIIM Note: maturase Location: 33570-33804 bp Feature: domain Description: McrA Location: 33888-34185 bp Feature: domain Description: McrA Location: 33888-34185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_16 (pfam13191), HELICc (smart00490), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHG010000063.1 Okeania sp. SIO3B5 3B5_NODE_63, whole genome shotgun sequence (33343 bp)
Overview 1 RT 1: 11086-13804 bp Neighborhood of RT #1 [11086, 13815] RVT_N RVT-GII GIIM HNH dam Feature: gene Location: 11086-12495 bp Feature: domain Description: RVT_N Location: 11128-11344 bp Feature: domain Description: RVT_N Location: 11128 -11344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11407-12073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11407-12073 bp Feature: domain Description: GIIM Note: maturase Location: 12175-12406 bp Feature: domain Description: GIIM Note: maturase Location: 12175-12406 bp Feature: gene Location: 12667-12927 bp Feature: domain Description: HNH Note: nucleases Location: 12781-12886 bp Feature: domain Description: HNH Note: nucleases Location: 12781-128 86 bp Feature: gene Location: 13018-13815 bp Feature: domain Description: dam Location: 13063-13804 bp Feature: domain Description: dam Location: 13063-13804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), dam (TIGR00571)

Seq: JAAHHG010000630.1 Okeania sp. SIO3B5 3B5_NODE_630, whole genome shotgun sequence (5232 bp)
Overview 1 RT 1: 2859-5186 bp Neighborhood of RT #1 [2859, 5230] DLH RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 2859-3215 bp Feature: domain Description: DLH Location: 2889-3195 bp Feature: domain Description: DLH Location: 2889-3195 bp Feature: gene Location: 3379-3585 bp Feature: gene Location: 3787-4647 bp Feature: domain Description: RVT_N Location: 3904-4147 bp Feature: domain Description: RVT_N Location: 3904-4147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4195-4576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4195-4576 bp Feature: gene Location: 4619-5230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4889 bp Feature: domain Description: GIIM Note: maturase Location: 4961-5186 bp Feature: domain Description: GIIM Note: maturase Location: 4961-5186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DLH (pfam01738), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHHG010000064.1 Okeania sp. SIO3B5 3B5_NODE_64, whole genome shotgun sequence (33056 bp)
Overview 1 RT 1: 2-4273 bp Neighborhood of RT #1 [2, 4275] RVT-GII GIIM McrA RVT_N RVT-GII GIIM HNH PRK13474 Feature: gene Location: 2-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-128 bp Feature: domain Description: GIIM Note: maturase Location: 230-461 bp Feature: domain Description: GIIM Note: maturase Location: 230 -461 bp Feature: domain Description: McrA Location: 563-869 bp Feature: domain Description: McrA Location: 563-869 bp Feature: gene Location: 1263-1427 bp Feature: gene Location: 1585-3264 bp Feature: domain Description: RVT_N Location: 1633-1876 bp Feature: domain Description: RVT_N Location: 1633-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927-2566 bp Feature: domain Description: GIIM Note: maturase Location: 2623-2851 bp Feature: domain Description: GIIM Note: maturase Location: 2623-2851 bp Feature: domain Description: HNH Note: nucleases Location: 3100-3235 bp Feature: domain Description: HNH Note: nucleases Location: 3100-3235 bp Feature: gene Location: 3270-3551 bp Feature: gene Location: 3736-4275 bp Feature: domain Description: PRK13474 Location: 3748-4273 bp Feature: domain Description: PRK13474 Location: 3748-4273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), HNH (pfam01844), PRK13474 (cytochrome b6-f complex iron-sulfur subunit; Provisional)

Seq: JAAHHG010000684.1 Okeania sp. SIO3B5 3B5_NODE_684, whole genome shotgun sequence (4530 bp)
Overview 1 RT 1: 2-4366 bp Neighborhood of RT #1 [2, 4366] HTH_OrfB_IS605 RVT_N RVT-GII GIIM McrA Feature: gene Location: 2-238 bp Feature: domain Description: HTH_OrfB_IS605 Location: 8-131 bp Feature: domain Description: HTH_OrfB_IS605 Location: 8-131 bp Feature: gene Location: 252-1184 bp Feature: gene Location: 2123-3940 bp Feature: domain Description: RVT_N Location: 2240-2483 bp Feature: domain Description: RVT_N Location: 2240-2483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2531-3200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2531 -3200 bp Feature: domain Description: GIIM Note: maturase Location: 3272-3506 bp Feature: domain Description: GIIM Note: maturase Location: 3272-3506 bp Feature: domain Description: McrA Location: 3584-3878 bp Feature: domain Description: McrA Location: 3584-3878 bp Feature: gene Location: 4166-4366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_OrfB_IS605 (pfam12323), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHHG010000007.1 Okeania sp. SIO3B5 3B5_NODE_7, whole genome shotgun sequence (59922 bp)
Overview 1 RT 1: 3-2500 bp Neighborhood of RT #1 [3, 2500] RVT-GII GIIM McrA RVT_N RVT-GII RVT_N Feature: gene Location: 3-149 bp Feature: gene Location: 243-1295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249-504 bp Feature: domain Description: GIIM Note: maturase Location: 576-810 bp Feature: domain Description: GIIM Note: maturase Location: 576-810 bp Feature: domain Description: McrA Location: 894-1179 bp Feature: domain Description: McrA Location: 894-1179 bp Feature: gene Location: 1276-1860 bp Feature: domain Description: RVT_N Location: 1279-1384 bp Feature: domain Description: RVT_N Location: 1279-1384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432 -1813 bp Feature: gene Location: 1847-2113 bp Feature: domain Description: RVT_N Location: 1964-2060 bp Feature: domain Description: RVT_N Location: 1964-2060 bp Feature: gene Location: 2339-2500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: JAAHHG010000715.1 Okeania sp. SIO3B5 3B5_NODE_715, whole genome shotgun sequence (4191 bp)
Overview 1 RT 1: 453-4109 bp Neighborhood of RT #1 [453, 4109] McrA RVT_N RVT-GII Feature: gene Location: 453-1079 bp Feature: domain Description: McrA Location: 618-903 bp Feature: domain Description: McrA Location: 618-903 bp Feature: gene Location: 1290-2549 bp Feature: domain Description: RVT_N Location: 1407-1647 bp Feature: domain Description: RVT_N Location: 1407-1647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698-2388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1698-2388 bp Feature: gene Location: 2861-3025 bp Feature: gene Location: 3810-4109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII