myRT

myRT report for GCA_010692645.1_ASM1069264v1

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Seq: JAAHGS010000114.1 Symploca sp. SIO2E9 2E9_NODE_114, whole genome shotgun sequence (19702 bp)
Overview 1 RT 1: 14414-19180 bp Neighborhood of RT #1 [14414, 19180] RlpA PRK05385 RVT_N RVT-GII GIIM PurM Feature: gene Location: 14414-14965 bp Feature: domain Description: RlpA Location: 14477-14957 bp Feature: domain Description: RlpA Location: 1 4477-1 4957 bp Feature: gene Location: 15585-15794 bp Feature: domain Description: PRK05385 Location: 15588-15786 bp Feature: domain Description: PRK05385 Location: 1 5588-1 5786 bp Feature: gene Location: 16633-17541 bp Feature: domain Description: RVT_N Location: 16669-16831 bp Feature: domain Description: RVT_N Location: 1 6669-1 6831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16996-17095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6996-1 7095 bp Feature: domain Description: GIIM Note: maturase Location: 17230-17461 bp Feature: domain Description: GIIM Note: maturase Location: 1 7230-1 7461 bp Feature: gene Location: 17715-18509 bp Feature: domain Description: PurM Location: 17718-18492 bp Feature: domain Description: PurM Location: 1 771 8-1 8492 bp Feature: gene Location: 18560-19180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), PRK05385 (phosphoribosylaminoimidazole synthetase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PurM (COG0150)

Seq: JAAHGS010000128.1 Symploca sp. SIO2E9 2E9_NODE_128, whole genome shotgun sequence (18300 bp)
Overview 1 RT 1: 314-3803 bp Neighborhood of RT #1 [314, 3803] HTH_OrfB_IS605 RVT_N RVT-GII Cofac_haem_bdg Feature: gene Location: 314-1144 bp Feature: domain Description: HTH_OrfB_IS605 Location: 833-938 bp Feature: domain Description: HTH_OrfB_IS605 Location: 833-938 bp Feature: gene Location: 1258-1392 bp Feature: gene Location: 1684-2514 bp Feature: domain Description: RVT_N Location: 1720-1966 bp Feature: domain Description: RVT_N Location: 172 0-1966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 017-2 443 bp Feature: gene Location: 2587-3492 bp Feature: domain Description: Cofac_haem_bdg Location: 2749-3379 bp Feature: domain Description: Cofac_haem_bdg Location: 2 749-3379 bp Feature: gene Location: 3537-3803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_OrfB_IS605 (pfam12323), RVT_N (pfam13655), RVT-GII, Cofac_haem_bdg (pfam04187)

Seq: JAAHGS010000140.1 Symploca sp. SIO2E9 2E9_NODE_140, whole genome shotgun sequence (17071 bp)
Overview 1 RT 1: 857-4056 bp Neighborhood of RT #1 [857, 4058] RVT-GII GIIM HNH ArgJ Feature: gene Location: 857-2362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887-1565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887-1565 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1895 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1895 bp Feature: domain Description: HNH Note: nucleases Location: 2117-2252 bp Feature: domain Description: HNH Note: nucleases Location: 2117-2252 bp Feature: gene Location: 2395-2583 bp Feature: gene Location: 2817-4058 bp Feature: domain Description: ArgJ Location: 2841-4056 bp Feature: domain Description: ArgJ Location: 2841-4056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), ArgJ (TIGR00120)

Seq: JAAHGS010000153.1 Symploca sp. SIO2E9 2E9_NODE_153, whole genome shotgun sequence (15901 bp)
Overview 1 RT 1: 2-2145 bp Neighborhood of RT #1 [2, 2150] RVT_N RVT-GII AnsA2 Feature: gene Location: 2-460 bp Feature: domain Description: RVT_N Location: 38-284 bp Feature: domain Description: RVT_N Location: 38-284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-4 61 bp Feature: gene Location: 753-887 bp Feature: gene Location: 1197-2150 bp Feature: domain Description: AnsA2 Location: 1200-2145 bp Feature: domain Description: AnsA2 Location: 1200-214 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, AnsA2 (COG4448)

Seq: JAAHGS010000178.1 Symploca sp. SIO2E9 2E9_NODE_178, whole genome shotgun sequence (13987 bp)
Overview 1 RT 1: 9547-13894 bp Neighborhood of RT #1 [9547, 13911] PRK07569 FrhG RVT_N RVT-GII GIIM McrA CBS_pair_bac CP12 Feature: gene Location: 9547-10263 bp Feature: domain Description: PRK07569 Location: 9550-10249 bp Feature: domain Description: PRK075 69 Location: 95 5 0-10249 bp Feature: gene Location: 10251-10796 bp Feature: domain Description: FrhG Location: 10254-10791 bp Feature: domain Description: FrhG Location: 1025 4-10791 bp Feature: gene Location: 11395-13116 bp Feature: domain Description: RVT_N Location: 11440-11707 bp Feature: domain Description: RVT_N Location: 11440-11707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11749-12400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11749-12400 bp Feature: domain Description: GIIM Note: maturase Location: 12481-12712 bp Feature: domain Description: GIIM Note: maturase Location: 12481-12712 bp Feature: domain Description: McrA Location: 12769-13087 bp Feature: domain Description: McrA Location: 12769-13087 bp Feature: gene Location: 13288-13911 bp Feature: domain Description: CBS_pair_bac Location: 13300-13648 bp Feature: domain Description: CBS_pair_bac Location: 13300-13648 bp Feature: domain Description: CP12 Location: 13687-13894 bp Feature: domain Description: CP12 Location: 13687-13894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07569 (bidirectional hydrogenase complex protein HoxU; Validated), FrhG (TIGR03294), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), CBS_pair_bac (cd17788), CP12 (smart01093)

Seq: JAAHGS010000223.1 Symploca sp. SIO2E9 2E9_NODE_223, whole genome shotgun sequence (9999 bp)
Overview 1 RT 1: 2-1564 bp Neighborhood of RT #1 [2, 1564] RVT_N RVT-GII Feature: gene Location: 2-580 bp Feature: domain Description: RVT_N Location: 158-404 bp Feature: domain Description: RVT_N Location: 158-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-581 bp Feature: gene Location: 752-919 bp Feature: gene Location: 1139-1564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JAAHGS010000338.1 Symploca sp. SIO2E9 2E9_NODE_338, whole genome shotgun sequence (2896 bp)
Overview 1 RT 1: 1-2777 bp Neighborhood of RT #1 [1, 2851] InsQ RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1-807 bp Feature: domain Description: InsQ Location: 10-625 bp Feature: domain Description: InsQ Location: 10-625 bp Feature: gene Location: 842-1003 bp Feature: gene Location: 1295-2851 bp Feature: domain Description: RVT_N Location: 1331-1577 bp Feature: domain Description: RVT_N Location: 1331-157 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1628-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1628-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054-2222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2054-2222 bp Feature: domain Description: GIIM Note: maturase Location: 2279-2453 bp Feature: domain Description: GIIM Note: maturase Location: 227 9-2453 bp Feature: domain Description: McrA Location: 2474-2777 bp Feature: domain Description: McrA Location: 247 4-27 7 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JAAHGS010000034.1 Symploca sp. SIO2E9 2E9_NODE_34, whole genome shotgun sequence (51261 bp)
Overview 1 RT 1: 43677-50564 bp Neighborhood of RT #1 [43677, 50564] YeeP COG3177 group_II_RT_mat RVT-UG19 Feature: gene Location: 43677-45605 bp Feature: domain Description: YeeP Location: 44505-45402 bp Feature: domain Description: YeeP Location: 44505-45402 bp Feature: gene Location: 45691-47157 bp Feature: domain Description: COG3177 Location: 45823-46519 bp Feature: domain Description: COG3177 Location: 458 23-46519 bp Feature: gene Location: 47168-49288 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 47306-47471 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 47306-47471 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 47555-48050 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 47555-48 050 bp Feature: gene Location: 49711-50085 bp Feature: gene Location: 50301-50564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), COG3177 (Fic family protein ), group_II_RT_mat (TIGR04416), RVT-UG19

Seq: JAAHGS010000347.1 Symploca sp. SIO2E9 2E9_NODE_347, whole genome shotgun sequence (2483 bp)
Overview 1 RT 1: 2-1830 bp Neighborhood of RT #1 [2, 1832] HNH RVT_N RVT-GII GIIM Feature: gene Location: 2-316 bp Feature: domain Description: HNH Note: nucleases Location: 68-203 bp Feature: domain Description: HNH Note: nucleases Location: 68-203 bp Feature: gene Location: 519-1832 bp Feature: domain Description: RVT_N Location: 552-795 bp Feature: domain Description: RVT_N Location: 552-79 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1539 bp Feature: domain Description: GIIM Note: maturase Location: 1647-1830 bp Feature: domain Description: GIIM Note: maturase Location: 1647-1830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAHGS010000350.1 Symploca sp. SIO2E9 2E9_NODE_350, whole genome shotgun sequence (2377 bp)
Overview 1 RT 1: 77-2149 bp Neighborhood of RT #1 [77, 2149] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 77-1777 bp Feature: domain Description: RVT_N Location: 131-377 bp Feature: domain Description: RVT_N Location: 131-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425-10 76 bp Feature: domain Description: GIIM Note: maturase Location: 1127-1361 bp Feature: domain Description: GIIM Note: maturase Location: 1127-1361 bp Feature: domain Description: HNHc Note: nucleases Location: 1595-1745 bp Feature: domain Description: HNHc Note: nucleases Location: 1595-1745 bp Feature: gene Location: 1988-2149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAHGS010000352.1 Symploca sp. SIO2E9 2E9_NODE_352, whole genome shotgun sequence (2356 bp)
Overview 1 RT 1: 9-2354 bp Neighborhood of RT #1 [9, 2354] RVT_N RVT-GII GIIM HNH Feature: gene Location: 9-1766 bp Feature: domain Description: RVT_N Location: 54-321 bp Feature: domain Description: RVT_N Location: 54-321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-1014 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1326 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1326 bp Feature: domain Description: HNH Note: nucleases Location: 1536-1668 bp Feature: domain Description: HNH Note: nucleases Location: 1536-1668 bp Feature: gene Location: 2223-2354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHGS010000041.1 Symploca sp. SIO2E9 2E9_NODE_41, whole genome shotgun sequence (48027 bp)
Overview 1 RT 1: 45303-48000 bp Neighborhood of RT #1 [45303, 48000] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Feature: gene Location: 45303-45578 bp Feature: domain Description: Cas2_I_II_III Location: 45312-45540 bp Feature: domain Description: Cas2_I_II_III Location: 45312 -45540 bp Feature: gene Location: 45579-46583 bp Feature: domain Description: Cas1_I-II-III Location: 45591-46545 bp Feature: domain Description: Cas1_I-II-III Location: 45591-46545 bp Feature: gene Location: 46724-47755 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 46979-47585 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 46979-47585 bp Feature: gene Location: 47779-48000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: JAAHGS010000063.1 Symploca sp. SIO2E9 2E9_NODE_63, whole genome shotgun sequence (32601 bp)
Overview 1 RT 1: 16345-21675 bp Neighborhood of RT #1 [16345, 21675] 2TM RVT_N RVT-GII GIIM HNH InsQ Feature: gene Location: 16345-16860 bp Feature: domain Description: 2TM Location: 16555-16786 bp Feature: domain Description: 2TM Location: 16555-16786 bp Feature: gene Location: 17268-17411 bp Feature: gene Location: 18252-20060 bp Feature: domain Description: RVT_N Location: 18294-18540 bp Feature: domain Description: RVT_N Location: 18294-18540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18582-19263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18582-19263 bp Feature: domain Description: GIIM Note: maturase Location: 19368-19596 bp Feature: domain Description: GIIM Note: maturase Location: 19368-19596 bp Feature: domain Description: HNH Note: nucleases Location: 19821-19956 bp Feature: domain Description: HNH Note: nucleases Location: 19821-19956 bp Feature: gene Location: 20053-21282 bp Feature: domain Description: InsQ Location: 20176-21130 bp Feature: domain Description: InsQ Location: 20176-2113 0 bp Feature: gene Location: 21361-21675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2TM (pfam13239), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), InsQ (COG0675)

Seq: JAAHGS010000074.1 Symploca sp. SIO2E9 2E9_NODE_74, whole genome shotgun sequence (28521 bp)
Overview 1 RT 1: 18367-26324 bp Neighborhood of RT #1 [18367, 26324] YliI NrdF RVT_N RVT-GII GIIM HNHc RNRR2 RVT_N RVT-GII GIIM McrA NrdF Feature: gene Location: 18367-19740 bp Feature: domain Description: YliI Location: 18508-19735 bp Feature: domain Description: YliI Location: 18508-19735 bp Feature: gene Location: 19875-20306 bp Feature: domain Description: NrdF Location: 19881-20292 bp Feature: domain Description: NrdF Location: 19881-20292 bp Feature: gene Location: 20342-22216 bp Feature: domain Description: RVT_N Location: 20408-20654 bp Feature: domain Description: RVT_N Location: 20408-20654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20696-21416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20696-214 16 bp Feature: domain Description: GIIM Note: maturase Location: 21515-21749 bp Feature: domain Description: GIIM Note: maturase Location: 21515-21749 bp Feature: domain Description: HNHc Note: nucleases Location: 21929-22091 bp Feature: domain Description: HNHc Note: nucleases Location: 21929-22091 bp Feature: gene Location: 22858-23133 bp Feature: domain Description: RNRR2 Location: 22864-23113 bp Feature: domain Description: RNRR2 Location: 22864-23113 bp Feature: gene Location: 23366-25096 bp Feature: domain Description: RVT_N Location: 23411-23657 bp Feature: domain Description: RVT_N Location: 23411-23657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23699-24380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23699-24380 bp Feature: domain Description: GIIM Note: maturase Location: 24461-24692 bp Feature: domain Description: GIIM Note: maturase Location: 24461-24692 bp Feature: domain Description: McrA Location: 24752-25061 bp Feature: domain Description: McrA Location: 24752-25061 bp Feature: gene Location: 25629-25967 bp Feature: domain Description: NrdF Location: 25722-25911 bp Feature: domain Description: NrdF Location: 25722-25911 bp Feature: gene Location: 26040-26324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YliI (COG2133), NrdF (COG0208), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RNRR2 (cd01049), McrA (COG4058)

Seq: JAAHGS010000075.1 Symploca sp. SIO2E9 2E9_NODE_75, whole genome shotgun sequence (28294 bp)
Overview 1 RT 1: 15831-21613 bp Neighborhood of RT #1 [15831, 21714] Y1_Tnp InsQ RVT_N RVT-GII GIIM HNHc TauD UbiE Feature: gene Location: 15831-16235 bp Feature: domain Description: Y1_Tnp Location: 15882-16224 bp Feature: domain Description: Y1_Tnp Location: 15 882-16224 bp Feature: gene Location: 16297-17325 bp Feature: domain Description: InsQ Location: 16381-17281 bp Feature: domain Description: InsQ Location: 16381-17281 bp Feature: gene Location: 17869-19593 bp Feature: domain Description: RVT_N Location: 17914-18160 bp Feature: domain Description: RVT_N Location: 17914-18160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18202-18877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18202-18877 bp Feature: domain Description: GIIM Note: maturase Location: 18958-19189 bp Feature: domain Description: GIIM Note: maturase Location: 18958-19189 bp Feature: domain Description: HNHc Note: nucleases Location: 19363-19519 bp Feature: domain Description: HNHc Note: nucleases Location: 19363-19519 bp Feature: gene Location: 19802-20017 bp Feature: gene Location: 20224-21714 bp Feature: domain Description: TauD Location: 20254-21022 bp Feature: domain Description: TauD Location: 20254-21022 bp Feature: domain Description: UbiE Location: 21262-21613 bp Feature: domain Description: UbiE Location: 21262-21613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), TauD (pfam02668), UbiE (COG2226)

Seq: JAAHGS010000008.1 Symploca sp. SIO2E9 2E9_NODE_8, whole genome shotgun sequence (141601 bp)
Overview 1 RT 1: 132609-141339 bp Neighborhood of RT #1 [132609, 141339] InsQ RVT-UG4 Aspzincin_M35 RpoE DUF1906 RVT_N RVT-GII GIIM HNH Feature: gene Location: 132609-133799 bp Feature: domain Description: InsQ Location: 132621-133758 bp Feature: domain Description: InsQ Location: 132621-133758 bp Feature: gene Location: 133842-134006 bp Feature: gene Location: 134259-134726 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 134424-134724 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 134424-134724 bp Feature: gene Location: 134827-135111 bp Feature: gene Location: 135189-135893 bp Feature: domain Description: Aspzincin_M35 Location: 135498-135813 bp Feature: domain Description: Aspzincin_M35 Location: 135498-135813 bp Feature: gene Location: 136267-137469 bp Feature: domain Description: RpoE Location: 136330-136816 bp Feature: domain Description: RpoE Location: 136330-136816 bp Feature: gene Location: 137783-138493 bp Feature: domain Description: DUF1906 Location: 137882-138425 bp Feature: domain Description: DUF1906 Location: 137882-138425 bp Feature: gene Location: 139259-141049 bp Feature: domain Description: RVT_N Location: 139298-139544 bp Feature: domain Description: RVT_N Location: 139298-139544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139586-140267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139586-140267 bp Feature: domain Description: GIIM Note: maturase Location: 140351-140579 bp Feature: domain Description: GIIM Note: maturase Location: 140351-140579 bp Feature: domain Description: HNH Note: nucleases Location: 140804-140939 bp Feature: domain Description: HNH Note: nucleases Location: 140804-140939 bp Feature: gene Location: 141202-141339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-UG4, Aspzincin_M35 (pfam14521), RpoE (COG3343), DUF1906 (pfam08924), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAHGS010000092.1 Symploca sp. SIO2E9 2E9_NODE_92, whole genome shotgun sequence (23719 bp)
Overview 1 RT 1: 241-2297 bp 2 RT 2: 10873-16615 bp Neighborhood of RT #1 [241, 2297] RVT-UG4 Uma2 Neighborhood of RT #2 [10873, 16615] Ssb GCD1 MPG1_transferase RVT_N RVT-GII YkfC Feature: gene Location: 241-1332 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 589-1066 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 589-1066 bp Feature: gene Location: 1493-2116 bp Feature: domain Description: Uma2 Location: 1538-2093 bp Feature: domain Description: Uma2 Location: 1538-2093 bp Feature: gene Location: 2154-2297 bp Feature: gene Location: 10873-11418 bp Feature: domain Description: Ssb Location: 10882-11416 bp Feature: domain Description: Ssb Location: 10882-11416 bp Feature: gene Location: 11703-14246 bp Feature: domain Description: GCD1 Location: 11706-12807 bp Feature: domain Description: GCD1 Location: 117 06-12807 bp Feature: domain Description: MPG1_transferase Location: 12855-14181 bp Feature: domain Description: MPG1_transferase Location: 12855-14181 bp Feature: gene Location: 14710-15711 bp Feature: domain Description: RVT_N Location: 14743-14986 bp Feature: domain Description: RVT_N Location: 14743-14986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15031-15202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15031-15202 bp Feature: domain Description: YkfC Location: 15208-15631 bp Feature: domain Description: YkfC Location: 15208-15631 bp Feature: gene Location: 15926-16252 bp Feature: gene Location: 16274-16615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, Uma2 (pfam05685), Ssb (COG0629), GCD1 (COG1208), MPG1_transferase (cd05805), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: JAAHGS010000093.1 Symploca sp. SIO2E9 2E9_NODE_93, whole genome shotgun sequence (23613 bp)
Overview 1 RT 1: 4364-7381 bp Neighborhood of RT #1 [4364, 7383] R_switched_YkoY RVT_N RVT-GII McrA RRXRR PLN02619 Feature: gene Location: 4364-5137 bp Feature: domain Description: R_switched_YkoY Location: 4502-5033 bp Feature: domain Description: R_switched_YkoY Location: 4502-5033 bp Feature: gene Location: 5302-5532 bp Feature: domain Description: RVT_N Location: 5308-5461 bp Feature: domain Description: RVT_N Location: 5308-5461 bp Feature: gene Location: 5601-6257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5604-5670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5604-5670 bp Feature: domain Description: McrA Location: 5904-6225 bp Feature: domain Description: McrA Location: 5904-6225 bp Feature: gene Location: 6518-6808 bp Feature: domain Description: RRXRR Location: 6530-6782 bp Feature: domain Description: RRXRR Location: 6530-6782 bp Feature: gene Location: 6934-7383 bp Feature: domain Description: PLN02619 Location: 6937-7381 bp Feature: domain Description: PLN02619 Location: 6937-7381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R_switched_YkoY (TIGR03716), RVT_N (pfam13655), RVT-GII, McrA (COG4058), RRXRR (pfam14239), PLN02619 (nucleoside-diphosphate kinase)

Seq: JAAHGS010000097.1 Symploca sp. SIO2E9 2E9_NODE_97, whole genome shotgun sequence (23248 bp)
Overview 1 RT 1: 19973-23029 bp Neighborhood of RT #1 [19973, 23040] APA2 RVT_N RVT-GII McrA APA2 Feature: gene Location: 19973-20215 bp Feature: domain Description: APA2 Location: 20003-20195 bp Feature: domain Description: APA2 Location: 20003-2019 5 bp Feature: gene Location: 20308-20628 bp Feature: gene Location: 20739-22289 bp Feature: domain Description: RVT_N Location: 20775-21021 bp Feature: domain Description: RVT_N Location: 20775-21021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21072-21666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21072-21666 bp Feature: domain Description: McrA Location: 21900-22224 bp Feature: domain Description: McrA Location: 219 00-22224 bp Feature: gene Location: 22486-23040 bp Feature: domain Description: APA2 Location: 22492-23029 bp Feature: domain Description: APA2 Location: 22492-23029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APA2 (COG4360), RVT_N (pfam13655), RVT-GII, McrA (COG4058)