myRT

myRT report for GCA_010723575.1_ASM1072357v1

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Seq: BLKZ01000001.1 Mycobacterium bourgelatii JCM 30725 DNA, sequence1, whole genome shotgun sequence (5817465 bp)
Overview 1 RT 1: 807298-813641 bp 2 RT 2: 2147293-2153058 bp 3 RT 3: 3088288-3094746 bp 4 RT 4: 4217521-4222120 bp 5 RT 5: 4395056-4403686 bp Neighborhood of RT #1 [807298, 813641] groES groEL RVT-GII RVT-GII GIIM RVT-GII RVT-GII Neighborhood of RT #2 [2147293, 2153111] PinE Zn_ribbon_recom HTH_TioE_rpt2 RVT-GII GIIM InsE Neighborhood of RT #3 [3088288, 3094799] M56_BlaR1_MecR1_like COG3682 RVT-GII RVT-GII GIIM Ndh F420_Rv1855c SsuD Neighborhood of RT #4 [4217521, 4222137] TPM_phosphatase RVT-GII WXG100 WXG100_ESAT6 Neighborhood of RT #5 [4395056, 4403694] PRK06753 COG5651 RVT-GII GIIM RVT-GII Transglycosylas PRK00576 Feature: gene Location: 807298-807600 bp Feature: domain Description: groES Location: 807310-807592 bp Feature: domain Description: groES Location: 80731 0-807592 bp Feature: gene Location: 807681-809303 bp Feature: domain Description: groEL Location: 807684-809286 bp Feature: domain Description: groEL Location: 807684-809286 bp Feature: gene Location: 809914-810189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810109-810184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 01 09-81 01 84 bp Feature: gene Location: 810260-811165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810275-810719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0275-81 071 9 bp Feature: domain Description: GIIM Note: maturase Location: 810773-810977 bp Feature: domain Description: GIIM Note: maturase Location: 81 0773-81 0977 bp Feature: gene Location: 811394-811693 bp Feature: gene Location: 811678-812040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 811957-812035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 1 957-81 2035 bp Feature: gene Location: 812281-812646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812302-812566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 2302-81 2566 bp Feature: gene Location: 812657-813010 bp Feature: gene Location: 813135-813641 bp Feature: gene Location: 2147293-2147721 bp Feature: gene Location: 2147728-2149806 bp Feature: domain Description: PinE Location: 2147779-2148472 bp Feature: domain Description: PinE Location: 21 47779-21 48472 bp Feature: domain Description: Zn_ribbon_recom Location: 2148724-2148895 bp Feature: domain Description: Zn_ribbon_recom Location: 21 48724-21 48895 bp Feature: domain Description: HTH_TioE_rpt2 Location: 2149597-2149741 bp Feature: domain Description: HTH_TioE_rpt2 Location: 21 49597-21 49741 bp Feature: gene Location: 2150700-2152166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2151030-2151720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 51 030-21 51 720 bp Feature: domain Description: GIIM Note: maturase Location: 2151795-2152014 bp Feature: domain Description: GIIM Note: maturase Location: 21 51 795-21 5201 4 bp Feature: gene Location: 2152474-2152626 bp Feature: gene Location: 2152737-2153111 bp Feature: domain Description: InsE Location: 2152749-2153058 bp Feature: domain Description: InsE Location: 21 52749-21 53058 bp Feature: gene Location: 3088288-3089238 bp Feature: domain Description: M56_BlaR1_MecR1_like Location: 3088630-3089113 bp Feature: domain Description: M56_BlaR1 _MecR1 _like Location: 3088630-30891 1 3 bp Feature: gene Location: 3089254-3089670 bp Feature: domain Description: COG3682 Location: 3089266-3089626 bp Feature: domain Description: COG3682 Location: 3089266-3089626 bp Feature: gene Location: 3090476-3090844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090761-3090839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090761 -3090839 bp Feature: gene Location: 3091164-3091823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3091167-3091374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3091 1 67-3091 374 bp Feature: domain Description: GIIM Note: maturase Location: 3091431-3091635 bp Feature: domain Description: GIIM Note: maturase Location: 3091 431 -3091 635 bp Feature: gene Location: 3092343-3093734 bp Feature: domain Description: Ndh Location: 3092382-3093621 bp Feature: domain Description: Ndh Location: 3092382-3093621 bp Feature: gene Location: 3093876-3094799 bp Feature: domain Description: F420_Rv1855c Location: 3093912-3094575 bp Feature: domain Description: F420_Rv1 855c Location: 309391 2-3094575 bp Feature: domain Description: SsuD Location: 3094626-3094746 bp Feature: domain Description: SsuD Location: 3094626-3094746 bp Feature: gene Location: 4217521-4219506 bp Feature: domain Description: TPM_phosphatase Location: 4217635-4217986 bp Feature: domain Description: TPM_phosphatase Location: 421 7635-421 7986 bp Feature: gene Location: 4219662-4220060 bp Feature: gene Location: 4220164-4220904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4220347-4220899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4220347-4220899 bp Feature: gene Location: 4221524-4221808 bp Feature: domain Description: WXG100 Location: 4221533-4221785 bp Feature: domain Description: WXG1 00 Location: 4221 533-4221 785 bp Feature: gene Location: 4221841-4222137 bp Feature: domain Description: WXG100_ESAT6 Location: 4221856-4222120 bp Feature: domain Description: WXG1 00_ESAT6 Location: 4221 856-42221 20 bp Feature: gene Location: 4395056-4396204 bp Feature: domain Description: PRK06753 Location: 4395068-4396145 bp Feature: domain Description: PRK06753 Location: 4395068-43961 45 bp Feature: gene Location: 4396252-4397751 bp Feature: domain Description: COG5651 Location: 4396267-4397713 bp Feature: domain Description: COG5651 Location: 4396267-439771 3 bp Feature: gene Location: 4398041-4399072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4398044-4398389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4398044-4398389 bp Feature: gene Location: 4399087-4399320 bp Feature: gene Location: 4399940-4400281 bp Feature: domain Description: GIIM Note: maturase Location: 4399943-4400096 bp Feature: domain Description: GIIM Note: maturase Location: 4399943-4400096 bp Feature: gene Location: 4400305-4401288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4400590-4401205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4400590-4401 205 bp Feature: gene Location: 4401825-4402385 bp Feature: domain Description: Transglycosylas Location: 4402161-4402371 bp Feature: domain Description: Transglycosylas Location: 44021 61 -4402371 bp Feature: gene Location: 4403089-4403694 bp Feature: domain Description: PRK00576 Location: 4403161-4403686 bp Feature: domain Description: PRK00576 Location: 44031 61 -4403686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-GII, GIIM (pfam08388), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_TioE_rpt2 (cd04773), InsE (COG2963), M56_BlaR1_MecR1_like (cd07341), COG3682 (Predicted transcriptional regulator )
Ndh (COG1252), F420_Rv1855c (TIGR03560), SsuD (COG2141), TPM_phosphatase (pfam04536), WXG100 (pfam06013), WXG100_ESAT6 (TIGR03930), PRK06753 (hypothetical protein; Provisional), COG5651 (PPE-repeat protein ), Transglycosylas (pfam06737), PRK00576 (molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional)

Seq: BLKZ01000002.1 Mycobacterium bourgelatii JCM 30725 DNA, sequence2, whole genome shotgun sequence (1095339 bp)
Overview 1 RT 1: 15633-21204 bp 2 RT 2: 241562-246540 bp Neighborhood of RT #1 [15633, 21227] PRK07890 group_II_RT_mat RVT-GII GIIM RVT-GII MHB PRK08195 Neighborhood of RT #2 [241562, 246644] F420_G6P_family YqeY RVT-GII GIIM RVT-GII GPDPase_memb Feature: gene Location: 15633-16415 bp Feature: domain Description: PRK07890 Location: 15645-16413 bp Feature: domain Description: PRK07890 Location: 15645-16413 bp Feature: gene Location: 16412-17551 bp Feature: gene Location: 17662-19035 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17842-17902 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17842 -17902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18115-18637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18115-18637 bp Feature: domain Description: GIIM Note: maturase Location: 18730-18943 bp Feature: domain Description: GIIM Note: maturase Location: 18730-18943 bp Feature: gene Location: 18527-18805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18647-18758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18647-18758 bp Feature: gene Location: 19640-19906 bp Feature: domain Description: MHB Location: 19739-19817 bp Feature: domain Description: MHB Location: 19739-19817 bp Feature: gene Location: 20286-21227 bp Feature: domain Description: PRK08195 Location: 20292-21204 bp Feature: domain Description: PRK08195 Location: 2 02 92 -2 12 04 bp Feature: gene Location: 241562-242548 bp Feature: domain Description: F420_G6P_family Location: 241574-242537 bp Feature: domain Description: F42 0_G6P_family Location: 2 41574-2 42 537 bp Feature: gene Location: 242599-243063 bp Feature: domain Description: YqeY Location: 242608-243061 bp Feature: domain Description: YqeY Location: 2 42 608-2 43061 bp Feature: gene Location: 243174-243806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243177-243384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 43177-2 43384 bp Feature: domain Description: GIIM Note: maturase Location: 243501-243714 bp Feature: domain Description: GIIM Note: maturase Location: 2 43501-2 43714 bp Feature: gene Location: 243815-244816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244436-244808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 44436-2 44808 bp Feature: gene Location: 245290-245538 bp Feature: gene Location: 245142-246644 bp Feature: domain Description: GPDPase_memb Location: 246177-246540 bp Feature: domain Description: GPDPase_memb Location: 2 46177-2 46540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07890 (short chain dehydrogenase; Provisional), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), MHB (pfam16525), PRK08195 (4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated), F420_G6P_family (TIGR03557), YqeY (pfam09424), GPDPase_memb (pfam10110)