myRT

myRT report for GCA_010806885.1_ASM1080688v1

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Seq: JAAGSB010000004.1 Escherichia coli strain 844_18 NODE_4_length_227984_cov_28.150963, whole genome shotgun sequence (227984 bp)
Overview 1 RT 1: 84446-88555 bp Neighborhood of RT #1 [84446, 88555] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 84446-85450 bp Feature: domain Description: LZ_Tnp_IS66 Location: 84584-84809 bp Feature: domain Description: LZ_Tnp_IS66 Location: 84584-84809 bp Feature: domain Description: zf-IS66 Location: 84830-84962 bp Feature: domain Description: zf-IS66 Location: 84830-84962 bp Feature: domain Description: DDE_Tnp_IS66 Location: 85007-85430 bp Feature: domain Description: DDE_Tnp_IS66 Location: 85007-85430 bp Feature: gene Location: 85521-85844 bp Feature: gene Location: 86012-87535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86285-87017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86285-8701 7 bp Feature: domain Description: GIIM Note: maturase Location: 87092-87290 bp Feature: domain Description: GIIM Note: maturase Location: 87092-87290 bp Feature: gene Location: 87829-88200 bp Feature: gene Location: 88271-88555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: JAAGSB010000050.1 Escherichia coli strain 844_18 NODE_50_length_21108_cov_21.839188, whole genome shotgun sequence (21108 bp)
Overview 1 RT 1: 9862-13199 bp Neighborhood of RT #1 [9862, 13199] YhhI YhhI YhhI RVT-GII GIIM Feature: gene Location: 9862-10998 bp Feature: domain Description: YhhI Location: 9865-10228 bp Feature: domain Description: YhhI Location: 9865-102 2 8 bp Feature: domain Description: YhhI Location: 10285-10639 bp Feature: domain Description: YhhI Location: 102 85-10639 bp Feature: domain Description: YhhI Location: 10657-10900 bp Feature: domain Description: YhhI Location: 10657-10900 bp Feature: gene Location: 11223-11372 bp Feature: gene Location: 11445-12695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11649-12306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11649-12 306 bp Feature: domain Description: GIIM Note: maturase Location: 12387-12609 bp Feature: domain Description: GIIM Note: maturase Location: 12 387-12 609 bp Feature: gene Location: 12719-13006 bp Feature: gene Location: 13059-13199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433)