myRT

myRT report for GCA_010892295.1_ASM1089229v1

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Seq: JAAIKT010000010.1 Streptomyces rhizosphaericus strain 0250 scaffold10, whole genome shotgun sequence (204122 bp)
Overview 1 RT 1: 99109-103886 bp Neighborhood of RT #1 [99109, 103886] Transposase_mut DDE_Tnp_ISAZ013 RVT-GII GIIM Feature: gene Location: 99109-99543 bp Feature: domain Description: Transposase_mut Location: 99118-99448 bp Feature: domain Description: Transposase_mut Location: 991 1 8-99448 bp Feature: gene Location: 99543-100865 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 99915-100833 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 9991 5-1 00833 bp Feature: gene Location: 101431-102861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101752-102433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 752-1 02433 bp Feature: domain Description: GIIM Note: maturase Location: 102514-102739 bp Feature: domain Description: GIIM Note: maturase Location: 1 0251 4-1 02739 bp Feature: gene Location: 103124-103492 bp Feature: gene Location: 103734-103886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), DDE_Tnp_ISAZ013 (pfam07592)

Seq: JAAIKT010000163.1 Streptomyces rhizosphaericus strain 0250 scaffold163, whole genome shotgun sequence (3738 bp)
Overview 1 RT 1: 135-3031 bp Neighborhood of RT #1 [135, 3468] RVT-GII GIIM DDE_5 Feature: gene Location: 135-365 bp Feature: gene Location: 904-2352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 5-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1984-2209 bp Feature: domain Description: GIIM Note: maturase Location: 1984-2 2 09 bp Feature: gene Location: 2359-3468 bp Feature: domain Description: DDE_5 Location: 2473-3031 bp Feature: domain Description: DDE_5 Location: 2 473-3031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-GII, GIIM (pfam08388)

Seq: JAAIKT010000023.1 Streptomyces rhizosphaericus strain 0250 scaffold23, whole genome shotgun sequence (134974 bp)
Overview 1 RT 1: 112428-121079 bp Neighborhood of RT #1 [112428, 121129] COG2159 PRK06126 RVT-GII Intron_maturas2 HNHc SDR_c YgiN GlcD Feature: gene Location: 112428-113291 bp Feature: domain Description: COG2159 Location: 112635-113127 bp Feature: domain Description: COG2159 Location: 11263 5-113 127 bp Feature: gene Location: 113291-114943 bp Feature: domain Description: PRK06126 Location: 113315-114902 bp Feature: domain Description: PRK06126 Location: 113 3 15-114902 bp Feature: gene Location: 115952-117739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116213-117008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116213 -117008 bp Feature: domain Description: Intron_maturas2 Location: 117110-117341 bp Feature: domain Description: Intron_maturas2 Location: 117110-1173 41 bp Feature: domain Description: HNHc Note: nucleases Location: 117539-117695 bp Feature: domain Description: HNHc Note: nucleases Location: 11753 9-117695 bp Feature: gene Location: 118533-119630 bp Feature: domain Description: SDR_c Location: 118557-119232 bp Feature: domain Description: SDR_c Location: 118557-11923 2 bp Feature: domain Description: YgiN Location: 119343-119562 bp Feature: domain Description: YgiN Location: 1193 43 -119562 bp Feature: gene Location: 119633-121129 bp Feature: domain Description: GlcD Location: 119834-121079 bp Feature: domain Description: GlcD Location: 11983 4-121079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2159 (Predicted metal-dependent hydrolase, TIM-barrel fold ), PRK06126 (hypothetical protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SDR_c (cd05233), YgiN (COG1359), GlcD (COG0277)