myRT

myRT report for GCA_010894405.1_ASM1089440v1

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Seq: JAAIYA010000002.1 Pyxidicoccus sp. CA032A NODE_2_length_875343_cov_21.4147, whole genome shotgun sequence (875343 bp)
Overview 1 RT 1: 369044-375661 bp Neighborhood of RT #1 [369044, 375661] rpt_mate_G_obs LRR_RI RVT-Retrons HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Aldo_ket_red Feature: gene Location: 369044-369319 bp Feature: gene Location: 369342-370316 bp Feature: domain Description: rpt_mate_G_obs Location: 369357-369471 bp Feature: domain Description: rpt_mate_G_obs Location: 369357-369471 bp Feature: domain Description: LRR_RI Location: 369615-370260 bp Feature: domain Description: LRR_RI Location: 36961 5-370260 bp Feature: gene Location: 370313-371728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 370907-371501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 370907-371 501 bp Feature: gene Location: 371938-374976 bp Feature: domain Description: HEAT_2 Location: 371968-372205 bp Feature: domain Description: HEAT_2 Location: 371 968-372205 bp Feature: domain Description: HEAT_2 Location: 372232-372484 bp Feature: domain Description: HEAT_2 Location: 372232-372484 bp Feature: domain Description: HEAT_2 Location: 372946-373099 bp Feature: domain Description: HEAT_2 Location: 372946-373099 bp Feature: domain Description: HEAT_2 Location: 373219-373435 bp Feature: domain Description: HEAT_2 Location: 37321 9-373435 bp Feature: domain Description: HEAT_2 Location: 373639-373864 bp Feature: domain Description: HEAT_2 Location: 373639-373864 bp Feature: domain Description: Aldo_ket_red Location: 374101-374803 bp Feature: domain Description: Aldo_ket_red Location: 3741 01 -374803 bp Feature: gene Location: 375014-375661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368), RVT-Retrons, HEAT_2 (pfam13646), Aldo_ket_red (pfam00248)

Seq: JAAIYA010000054.1 Pyxidicoccus sp. CA032A NODE_54_length_20453_cov_24.6334, whole genome shotgun sequence (20453 bp)
Overview 1 RT 1: 16613-20377 bp Neighborhood of RT #1 [16613, 20451] PRK09409 RVT-GII RVT-GII GIIM L-Ala-DL-Glu_epimerase Feature: gene Location: 16613-17437 bp Feature: domain Description: PRK09409 Location: 16619-17417 bp Feature: domain Description: PRK09409 Location: 16619-17417 bp Feature: gene Location: 17536-17847 bp Feature: gene Location: 17397-18419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18168-18408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18168-18408 bp Feature: gene Location: 18455-19174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18458-18824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18458-1882 4 bp Feature: domain Description: GIIM Note: maturase Location: 18899-19100 bp Feature: domain Description: GIIM Note: maturase Location: 18899-19100 bp Feature: gene Location: 19600-20451 bp Feature: domain Description: L-Ala-DL-Glu_epimerase Location: 19603-20377 bp Feature: domain Description: L-Ala-DL-Glu_epimerase Location: 19603-2 0377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09409 (IS2 transposase TnpB; Reviewed), RVT-GII, GIIM (pfam08388), L-Ala-DL-Glu_epimerase (cd03319)

Seq: JAAIYA010000005.1 Pyxidicoccus sp. CA032A NODE_5_length_624559_cov_23.1298, whole genome shotgun sequence (624559 bp)
Overview 1 RT 1: 270911-284324 bp Neighborhood of RT #1 [270911, 284671] BetA BetA BetA DAP2 RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 270911-272437 bp Feature: domain Description: BetA Location: 270923-271424 bp Feature: domain Description: BetA Location: 270923 -271424 bp Feature: domain Description: BetA Location: 271565-271892 bp Feature: domain Description: BetA Location: 271565-271892 bp Feature: domain Description: BetA Location: 272003-272417 bp Feature: domain Description: BetA Location: 272003 -272417 bp Feature: gene Location: 272572-273501 bp Feature: domain Description: DAP2 Location: 272692-273277 bp Feature: domain Description: DAP2 Location: 272692-273 277 bp Feature: gene Location: 274473-275924 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 275031-275673 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27503 1-275673 bp Feature: gene Location: 276327-278165 bp Feature: gene Location: 278162-284671 bp Feature: domain Description: WD40 Location: 278360-279017 bp Feature: domain Description: WD40 Location: 2783 60-279017 bp Feature: domain Description: HEAT_2 Location: 279188-279398 bp Feature: domain Description: HEAT_2 Location: 279188-2793 98 bp Feature: domain Description: HEAT_2 Location: 280001-280250 bp Feature: domain Description: HEAT_2 Location: 280001-280250 bp Feature: domain Description: HEAT_2 Location: 280292-280445 bp Feature: domain Description: HEAT_2 Location: 280292-280445 bp Feature: domain Description: HEAT_2 Location: 280487-280700 bp Feature: domain Description: HEAT_2 Location: 280487-280700 bp Feature: domain Description: HEAT_2 Location: 281081-281312 bp Feature: domain Description: HEAT_2 Location: 281081-2813 12 bp Feature: domain Description: HEAT_2 Location: 281438-281567 bp Feature: domain Description: HEAT_2 Location: 28143 8-281567 bp Feature: domain Description: HEAT_2 Location: 281981-282209 bp Feature: domain Description: HEAT_2 Location: 281981-282209 bp Feature: domain Description: HEAT_2 Location: 282257-282479 bp Feature: domain Description: HEAT_2 Location: 282257-282479 bp Feature: domain Description: HEAT_2 Location: 282530-282782 bp Feature: domain Description: HEAT_2 Location: 28253 0-282782 bp Feature: domain Description: HEAT_2 Location: 282833-282989 bp Feature: domain Description: HEAT_2 Location: 28283 3 -282989 bp Feature: domain Description: HEAT_2 Location: 283376-283610 bp Feature: domain Description: HEAT_2 Location: 283 3 76-283 610 bp Feature: domain Description: HEAT_2 Location: 284117-284324 bp Feature: domain Description: HEAT_2 Location: 284117-2843 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetA (COG2303), DAP2 (COG1506), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)

Seq: JAAIYA010000009.1 Pyxidicoccus sp. CA032A NODE_9_length_513501_cov_20.6353, whole genome shotgun sequence (513501 bp)
Overview 1 RT 1: 62212-67766 bp Neighborhood of RT #1 [62212, 67766] Phytochelatin RVT-Retrons Inhibitor_I9 Peptidases_S8_PCSK9_ProteinaseK_like Feature: gene Location: 62212-63387 bp Feature: gene Location: 63395-64231 bp Feature: domain Description: Phytochelatin Location: 63494-64193 bp Feature: domain Description: Phytochelatin Location: 634 94 -64 193 bp Feature: gene Location: 64581-65915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65028-65682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65028-65682 bp Feature: gene Location: 66029-67333 bp Feature: domain Description: Inhibitor_I9 Location: 66200-66413 bp Feature: domain Description: Inhibitor_I9 Location: 66200-664 13 bp Feature: domain Description: Peptidases_S8_PCSK9_ProteinaseK_like Location: 66440-67184 bp Feature: domain Description: Peptidases_S8_PCSK9_ProteinaseK_like Location: 664 4 0-67184 bp Feature: gene Location: 67518-67766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phytochelatin (pfam05023), RVT-Retrons, Inhibitor_I9 (pfam05922), Peptidases_S8_PCSK9_ProteinaseK_like (cd04077)