myRT

myRT report for GCA_010894455.1_ASM1089445v1

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Seq: JAAIXY010000014.1 Myxococcus sp. AB053B NODE_14_length_295450_cov_15.5822, whole genome shotgun sequence (295450 bp)
Overview 1 RT 1: 275143-287974 bp Neighborhood of RT #1 [275143, 287994] WD40 WD40 WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 275143-281673 bp Feature: domain Description: WD40 Location: 275404-275503 bp Feature: domain Description: WD40 Location: 275404-275503 bp Feature: domain Description: WD40 Location: 275521-275623 bp Feature: domain Description: WD40 Location: 275521 -275623 bp Feature: domain Description: WD40 Location: 275665-275752 bp Feature: domain Description: WD40 Location: 275665-275752 bp Feature: domain Description: WD40 Location: 275800-275917 bp Feature: domain Description: WD40 Location: 275800-27591 7 bp Feature: domain Description: HEAT_2 Location: 276166-276379 bp Feature: domain Description: HEAT_2 Location: 2761 66-276379 bp Feature: domain Description: HEAT_2 Location: 276976-277225 bp Feature: domain Description: HEAT_2 Location: 276976-277225 bp Feature: domain Description: HEAT_2 Location: 277270-277423 bp Feature: domain Description: HEAT_2 Location: 277270-277423 bp Feature: domain Description: HEAT_2 Location: 277465-277669 bp Feature: domain Description: HEAT_2 Location: 277465-277669 bp Feature: domain Description: HEAT Location: 277729-278026 bp Feature: domain Description: HEAT Location: 277729-278026 bp Feature: domain Description: HEAT_2 Location: 278140-278326 bp Feature: domain Description: HEAT_2 Location: 2781 40-278326 bp Feature: domain Description: HEAT_2 Location: 278917-279103 bp Feature: domain Description: HEAT_2 Location: 27891 7-2791 03 bp Feature: domain Description: HEAT_2 Location: 279151-279358 bp Feature: domain Description: HEAT_2 Location: 2791 51 -279358 bp Feature: domain Description: HEAT_2 Location: 279409-279619 bp Feature: domain Description: HEAT_2 Location: 279409-27961 9 bp Feature: domain Description: HEAT_2 Location: 279628-279781 bp Feature: domain Description: HEAT_2 Location: 279628-279781 bp Feature: domain Description: HEAT_2 Location: 280351-280585 bp Feature: domain Description: HEAT_2 Location: 280351 -280585 bp Feature: domain Description: HEAT_2 Location: 281065-281314 bp Feature: domain Description: HEAT_2 Location: 281 065-281 31 4 bp Feature: domain Description: HEAT_2 Location: 281458-281611 bp Feature: domain Description: HEAT_2 Location: 281 458-281 61 1 bp Feature: gene Location: 281670-283514 bp Feature: gene Location: 283924-285381 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 284482-285124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 284482-2851 24 bp Feature: gene Location: 285392-286297 bp Feature: domain Description: DAP2 Location: 285521-286094 bp Feature: domain Description: DAP2 Location: 285521 -286094 bp Feature: gene Location: 286468-287994 bp Feature: domain Description: BetA Location: 286471-286981 bp Feature: domain Description: BetA Location: 286471 -286981 bp Feature: domain Description: BetA Location: 287122-287395 bp Feature: domain Description: BetA Location: 2871 22-287395 bp Feature: domain Description: BetA Location: 287560-287974 bp Feature: domain Description: BetA Location: 287560-287974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), HEAT (sd00044), RVT-Retrons, DAP2 (COG1506), BetA (COG2303)

Seq: JAAIXY010000026.1 Myxococcus sp. AB053B NODE_26_length_187253_cov_15.3883, whole genome shotgun sequence (187253 bp)
Overview 1 RT 1: 86849-93120 bp Neighborhood of RT #1 [86849, 93120] UPF0227 RVT-Retrons Feature: gene Location: 86849-87376 bp Feature: domain Description: UPF0227 Location: 86879-87317 bp Feature: domain Description: UPF02 2 7 Location: 86879-87317 bp Feature: gene Location: 87637-87987 bp Feature: gene Location: 88130-89410 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88592-89204 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88592 -892 04 bp Feature: gene Location: 89576-91222 bp Feature: gene Location: 91219-93120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), RVT-Retrons

Seq: JAAIXY010000002.1 Myxococcus sp. AB053B NODE_2_length_789041_cov_15.6806, whole genome shotgun sequence (789041 bp)
Overview 1 RT 1: 45123-55867 bp Neighborhood of RT #1 [45123, 55872] HEAT_2 HEAT HEAT_2 HEAT_2 Aldo_ket_red RVT-Retrons rpt_mate_G_obs LRR_RI RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 Feature: gene Location: 45123-45755 bp Feature: gene Location: 45792-48842 bp Feature: domain Description: HEAT_2 Location: 45900-46152 bp Feature: domain Description: HEAT_2 Location: 45900-46152 bp Feature: domain Description: HEAT Location: 46185-46248 bp Feature: domain Description: HEAT Location: 46185-46248 bp Feature: domain Description: HEAT_2 Location: 46911-47166 bp Feature: domain Description: HEAT_2 Location: 46911-47166 bp Feature: domain Description: HEAT_2 Location: 47274-47520 bp Feature: domain Description: HEAT_2 Location: 47274-47520 bp Feature: domain Description: Aldo_ket_red Location: 47967-48684 bp Feature: domain Description: Aldo_ket_red Location: 47967-48684 bp Feature: gene Location: 49045-50463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49645-50236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49645-5023 6 bp Feature: gene Location: 50460-51434 bp Feature: domain Description: rpt_mate_G_obs Location: 50475-50586 bp Feature: domain Description: rpt_mate_G_obs Location: 50475-50586 bp Feature: domain Description: LRR_RI Location: 50952-51363 bp Feature: domain Description: LRR_RI Location: 50952-513 63 bp Feature: gene Location: 51505-55872 bp Feature: domain Description: RCC1 Location: 51718-51859 bp Feature: domain Description: RCC1 Location: 51718-51859 bp Feature: domain Description: RCC1 Location: 51877-52009 bp Feature: domain Description: RCC1 Location: 51877-52009 bp Feature: domain Description: RCC1 Location: 52018-52159 bp Feature: domain Description: RCC1 Location: 52018-52159 bp Feature: domain Description: RCC1 Location: 52168-52309 bp Feature: domain Description: RCC1 Location: 52168-523 09 bp Feature: domain Description: RCC1 Location: 52318-52435 bp Feature: domain Description: RCC1 Location: 523 18-5243 5 bp Feature: domain Description: RCC1 Location: 52468-52609 bp Feature: domain Description: RCC1 Location: 52468-52609 bp Feature: domain Description: RCC1 Location: 52618-52756 bp Feature: domain Description: RCC1 Location: 52618-52756 bp Feature: domain Description: RCC1 Location: 52768-52909 bp Feature: domain Description: RCC1 Location: 52768-52909 bp Feature: domain Description: RCC1 Location: 52918-53059 bp Feature: domain Description: RCC1 Location: 52918-53 059 bp Feature: domain Description: RCC1 Location: 53068-53209 bp Feature: domain Description: RCC1 Location: 53 068-53 209 bp Feature: domain Description: RCC1 Location: 53218-53359 bp Feature: domain Description: RCC1 Location: 53 218-53 3 59 bp Feature: domain Description: RCC1 Location: 53368-53509 bp Feature: domain Description: RCC1 Location: 53 3 68-53 509 bp Feature: domain Description: RCC1 Location: 53518-53620 bp Feature: domain Description: RCC1 Location: 53 518-53 620 bp Feature: domain Description: RCC1 Location: 53677-53806 bp Feature: domain Description: RCC1 Location: 53 677-53 806 bp Feature: domain Description: RCC1 Location: 53818-53959 bp Feature: domain Description: RCC1 Location: 53 818-53 959 bp Feature: domain Description: RCC1 Location: 53968-54109 bp Feature: domain Description: RCC1 Location: 53 968-54109 bp Feature: domain Description: RCC1 Location: 54118-54259 bp Feature: domain Description: RCC1 Location: 54118-54259 bp Feature: domain Description: RCC1 Location: 54268-54409 bp Feature: domain Description: RCC1 Location: 54268-54409 bp Feature: domain Description: RCC1 Location: 54418-54559 bp Feature: domain Description: RCC1 Location: 54418-54559 bp Feature: domain Description: RCC1 Location: 54568-54709 bp Feature: domain Description: RCC1 Location: 54568-54709 bp Feature: domain Description: RCC1 Location: 54733-54874 bp Feature: domain Description: RCC1 Location: 5473 3 -54874 bp Feature: domain Description: RCC1 Location: 54883-55024 bp Feature: domain Description: RCC1 Location: 54883 -55024 bp Feature: domain Description: RCC1 Location: 55033-55174 bp Feature: domain Description: RCC1 Location: 5503 3 -55174 bp Feature: domain Description: RCC1 Location: 55183-55324 bp Feature: domain Description: RCC1 Location: 55183 -553 24 bp Feature: domain Description: RCC1 Location: 55333-55474 bp Feature: domain Description: RCC1 Location: 553 3 3 -55474 bp Feature: domain Description: RCC1 Location: 55483-55624 bp Feature: domain Description: RCC1 Location: 55483 -55624 bp Feature: domain Description: RCC1 Location: 55633-55768 bp Feature: domain Description: RCC1 Location: 5563 3 -55768 bp Feature: domain Description: RCC1 Location: 55780-55867 bp Feature: domain Description: RCC1 Location: 55780-55867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), HEAT (sd00044), Aldo_ket_red (pfam00248), RVT-Retrons, rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368), RCC1 (pfam00415)