myRT

myRT report for GCA_010912735.1_ASM1091273v1

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Seq: POWC01000012.1 Prosthecochloris sp. isolate B10 NODE_12_length_80658_cov_4.608590, whole genome shotgun sequence (80658 bp)
Overview 1 RT 1: 45338-54232 bp Neighborhood of RT #1 [45338, 54321] rve_3 RT_G2_intron RVT-UG6 nitrilase RVT-GII GIIM NlpD MPP_Nbla03831 Feature: gene Location: 45338-45667 bp Feature: domain Description: rve_3 Location: 45353-45551 bp Feature: domain Description: rve_3 Location: 45353-45551 bp Feature: gene Location: 45790-46818 bp Feature: gene Location: 46856-51505 bp Feature: domain Description: RT_G2_intron Location: 47084-47225 bp Feature: domain Description: RT_G2_intron Location: 47084-47225 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 47774-48014 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 47774-4801 4 bp Feature: domain Description: nitrilase Location: 51011-51287 bp Feature: domain Description: nitrilase Location: 51 01 1 -51 287 bp Feature: gene Location: 51596-52444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51821-51926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 821 -51 926 bp Feature: domain Description: GIIM Note: maturase Location: 51977-52208 bp Feature: domain Description: GIIM Note: maturase Location: 51 977-52208 bp Feature: gene Location: 52628-53485 bp Feature: domain Description: NlpD Location: 52940-53477 bp Feature: domain Description: NlpD Location: 52940-53477 bp Feature: gene Location: 53509-54321 bp Feature: domain Description: MPP_Nbla03831 Location: 53536-54232 bp Feature: domain Description: MPP_Nbla03831 Location: 53536-54232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RT_G2_intron (cd01651), RVT-UG6, nitrilase (cl11424), RVT-GII, GIIM (pfam08388), NlpD (COG0739), MPP_Nbla03831 (cd07396)

Seq: POWC01000015.1 Prosthecochloris sp. isolate B10 NODE_15_length_54206_cov_4.524656, whole genome shotgun sequence (54206 bp)
Overview 1 RT 1: 94-4755 bp Neighborhood of RT #1 [94, 4790] RVT-GII TIR_2 NB-ARC TPR_12 TPR_12 PinE Feature: gene Location: 94-399 bp Feature: gene Location: 496-1524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 694-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 694-1351 bp Feature: gene Location: 1854-4085 bp Feature: domain Description: TIR_2 Location: 1878-2223 bp Feature: domain Description: TIR_2 Location: 1878-2 2 2 3 bp Feature: domain Description: NB-ARC Location: 2400-3027 bp Feature: domain Description: NB-ARC Location: 2 400-302 7 bp Feature: domain Description: TPR_12 Location: 3507-3717 bp Feature: domain Description: TPR_12 Location: 3507-3717 bp Feature: domain Description: TPR_12 Location: 3762-3984 bp Feature: domain Description: TPR_12 Location: 3762 -3984 bp Feature: gene Location: 4200-4790 bp Feature: domain Description: PinE Location: 4203-4755 bp Feature: domain Description: PinE Location: 42 03-4755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TIR_2 (pfam13676), NB-ARC (pfam00931), TPR_12 (pfam13424), PinE (COG1961)

Seq: POWC01000001.1 Prosthecochloris sp. isolate B10 NODE_1_length_280780_cov_5.229888, whole genome shotgun sequence (280780 bp)
Overview 1 RT 1: 18055-22374 bp Neighborhood of RT #1 [18055, 22374] PrtC RVT-GII Feature: gene Location: 18055-18864 bp Feature: gene Location: 19000-20244 bp Feature: domain Description: PrtC Location: 19009-20044 bp Feature: domain Description: PrtC Location: 19009-20044 bp Feature: gene Location: 20351-21868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20786-21476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20786-21476 bp Feature: gene Location: 21868-22071 bp Feature: gene Location: 22183-22374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrtC (COG0826), RVT-GII

Seq: POWC01000003.1 Prosthecochloris sp. isolate B10 NODE_3_length_190884_cov_4.977705, whole genome shotgun sequence (190884 bp)
Overview 1 RT 1: 83033-87186 bp 2 RT 2: 122146-128215 bp Neighborhood of RT #1 [83033, 87470] TrmB RVT-GII BtuB Neighborhood of RT #2 [122146, 128661] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III S_4TM TIGR03986 TIGR03986 Feature: gene Location: 83033-83626 bp Feature: domain Description: TrmB Location: 83066-83585 bp Feature: domain Description: TrmB Location: 83066-83585 bp Feature: gene Location: 83860-84069 bp Feature: gene Location: 84763-86244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85174-85864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85174 -85864 bp Feature: gene Location: 86338-86520 bp Feature: gene Location: 86550-87470 bp Feature: domain Description: BtuB Location: 86661-87186 bp Feature: domain Description: BtuB Location: 86661-87186 bp Feature: gene Location: 122146-122430 bp Feature: domain Description: Cas2_I_II_III Location: 122158-122395 bp Feature: domain Description: Cas2_I_II_III Location: 122158-122395 bp Feature: gene Location: 123045-123635 bp Feature: gene Location: 123971-126163 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 124181-124787 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 124 181-124 787 bp Feature: domain Description: Cas1_I-II-III Location: 125138-126122 bp Feature: domain Description: Cas1_I-II-III Location: 125138-126122 bp Feature: gene Location: 126199-127104 bp Feature: domain Description: S_4TM Location: 126208-127078 bp Feature: domain Description: S_4 TM Location: 126208-127078 bp Feature: gene Location: 127117-128661 bp Feature: domain Description: TIGR03986 Location: 127138-127456 bp Feature: domain Description: TIGR03986 Location: 127138-1274 56 bp Feature: domain Description: TIGR03986 Location: 127576-128215 bp Feature: domain Description: TIGR03986 Location: 127576-128215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrmB (pfam01978), RVT-GII, BtuB (COG4206), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), S_4TM (pfam18159), TIGR03986 (CRISPR-associated protein)

Seq: POWC01000008.1 Prosthecochloris sp. isolate B10 NODE_8_length_101862_cov_4.964370, whole genome shotgun sequence (101862 bp)
Overview 1 RT 1: 95827-99757 bp Neighborhood of RT #1 [95827, 99786] RVT-GII Peptidase_C39G Phenol_MetA_deg Feature: gene Location: 95827-95994 bp Feature: gene Location: 96403-96582 bp Feature: gene Location: 96613-97935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96868-97561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96868-975 61 bp Feature: gene Location: 98181-98882 bp Feature: domain Description: Peptidase_C39G Location: 98301-98703 bp Feature: domain Description: Peptidase_C39G Location: 98301-98703 bp Feature: gene Location: 98914-99786 bp Feature: domain Description: Phenol_MetA_deg Location: 99145-99757 bp Feature: domain Description: Phenol_MetA_deg Location: 99145 -9975 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Peptidase_C39G (cd02423), Phenol_MetA_deg (pfam13557)