myRT

myRT report for GCA_011006915.1_ASM1100691v1

Download annotations/find similar RTs

Seq: WFLU01000152.1 Enterobacter hormaechei strain AUH-ENM20 NODE_152_length_2273_cov_56.397996, whole genome shotgun sequence (2273 bp)
Overview 1 RT 1: 93-2272 bp Neighborhood of RT #1 [93, 2272] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WFLU01000174.1 Enterobacter hormaechei strain AUH-ENM20 NODE_175_length_1039_cov_11.298337, whole genome shotgun sequence (1039 bp)
Overview 1 RT 1: 1-589 bp Neighborhood of RT #1 [1, 1038] RVT-Retrons Feature: gene Location: 1-1038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10-589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10-589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: WFLU01000040.1 Enterobacter hormaechei strain AUH-ENM20 NODE_40_length_47641_cov_13.784543, whole genome shotgun sequence (47641 bp)
Overview 1 RT 1: 7365-17287 bp Neighborhood of RT #1 [7365, 17391] TIGR02687 YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 7365-9968 bp Feature: domain Description: TIGR02687 Location: 7383-9936 bp Feature: domain Description: TIGR02687 Location: 73 83 -993 6 bp Feature: gene Location: 10177-11952 bp Feature: domain Description: YeeA Location: 10228-11884 bp Feature: domain Description: YeeA Location: 10228-11884 bp Feature: gene Location: 11952-14954 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12414-12900 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12414-12900 bp Feature: domain Description: nitrilase Location: 14166-14856 bp Feature: domain Description: nitrilase Location: 14166-14856 bp Feature: gene Location: 14985-15434 bp Feature: gene Location: 15457-17391 bp Feature: domain Description: YeeA Location: 16096-16807 bp Feature: domain Description: YeeA Location: 16096-16807 bp Feature: domain Description: YeeA Location: 16963-17287 bp Feature: domain Description: YeeA Location: 16963 -17287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)