myRT

myRT report for GCA_011008555.1_ASM1100855v1

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Seq: JAAIWI010000042.1 Escherichia coli strain EC22 STEC2_S2_trimmed_contig_42, whole genome shotgun sequence (70228 bp)
Overview 1 RT 1: 2-3682 bp Neighborhood of RT #1 [2, 3792] RVT-GII GIIM IS285 Feature: gene Location: 2-142 bp Feature: gene Location: 504-2027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1 509 bp Feature: domain Description: GIIM Note: maturase Location: 1584-1782 bp Feature: domain Description: GIIM Note: maturase Location: 1 584-1 782 bp Feature: gene Location: 2114-2299 bp Feature: gene Location: 2494-3792 bp Feature: domain Description: IS285 Location: 2524-3682 bp Feature: domain Description: IS285 Location: 2524-3682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IS285 (COG3328)

Seq: JAAIWI010000081.1 Escherichia coli strain EC22 STEC2_S2_trimmed_contig_82, whole genome shotgun sequence (12501 bp)
Overview 1 RT 1: 2651-12395 bp Neighborhood of RT #1 [2651, 12499] TIGR02687 YeeA YeeA RVT-UG5 YeeA YeeA Feature: gene Location: 2651-5254 bp Feature: domain Description: TIGR02687 Location: 2669-5222 bp Feature: domain Description: TIGR02 687 Location: 2 669-52 2 2 bp Feature: gene Location: 5472-7268 bp Feature: domain Description: YeeA Location: 5511-5826 bp Feature: domain Description: YeeA Location: 5511-582 6 bp Feature: domain Description: YeeA Location: 6168-7200 bp Feature: domain Description: YeeA Location: 6168-72 00 bp Feature: gene Location: 7268-10270 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7730-8222 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7730-82 2 2 bp Feature: gene Location: 10411-10752 bp Feature: gene Location: 10775-12499 bp Feature: domain Description: YeeA Location: 11204-11915 bp Feature: domain Description: YeeA Location: 112 04-11915 bp Feature: domain Description: YeeA Location: 12071-12395 bp Feature: domain Description: YeeA Location: 12 071-12 395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5