myRT

myRT report for GCA_011008735.1_ASM1100873v1

Download annotations/find similar RTs

Seq: JAAIWO010000122.1 Klebsiella pneumoniae strain UCO509 NODE_122_length_296_cov_21.319527, whole genome shotgun sequence (296 bp)
Overview 1 RT 1: 1-289 bp Neighborhood of RT #1 [1, 294] RVT-GII Feature: gene Location: 1-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9-289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWO010000003.1 Klebsiella pneumoniae strain UCO509 NODE_3_length_272525_cov_17.962904, whole genome shotgun sequence (272525 bp)
Overview 1 RT 1: 265525-272359 bp Neighborhood of RT #1 [265525, 272382] FimC FimD RVT-UG4 EAL Feature: gene Location: 265525-266253 bp Feature: domain Description: FimC Location: 265573-266236 bp Feature: domain Description: FimC Location: 2 65573-2 662 36 bp Feature: gene Location: 266285-268894 bp Feature: domain Description: FimD Location: 266342-268883 bp Feature: domain Description: FimD Location: 2 66342 -2 68883 bp Feature: gene Location: 268894-270924 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269302-269746 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 69302 -2 69746 bp Feature: gene Location: 271561-272382 bp Feature: domain Description: EAL Location: 272245-272359 bp Feature: domain Description: EAL Location: 2 72 2 45-2 72 359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: JAAIWO010000075.1 Klebsiella pneumoniae strain UCO509 NODE_75_length_809_cov_48.101173, whole genome shotgun sequence (809 bp)
Overview 1 RT 1: 2-359 bp Neighborhood of RT #1 [2, 751] RVT-GII Feature: gene Location: 2-751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-3 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWO010000082.1 Klebsiella pneumoniae strain UCO509 NODE_82_length_628_cov_36.465070, whole genome shotgun sequence (628 bp)
Overview 1 RT 1: 1-627 bp Neighborhood of RT #1 [1, 627] RVT-GII Feature: gene Location: 1-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-382 bp Feature: gene Location: 499-627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII