myRT

myRT report for GCA_011008835.1_ASM1100883v1

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Seq: JAAIWQ010000108.1 Klebsiella pneumoniae strain UCO513 NODE_108_length_296_cov_22.911243, whole genome shotgun sequence (296 bp)
Overview 1 RT 1: 3-291 bp Neighborhood of RT #1 [3, 293] RVT-GII Feature: gene Location: 3-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 -291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWQ010000005.1 Klebsiella pneumoniae strain UCO513 NODE_5_length_272525_cov_13.365968, whole genome shotgun sequence (272525 bp)
Overview 1 RT 1: 144-6984 bp Neighborhood of RT #1 [144, 7001] EAL RVT-UG4 FimD FimC Feature: gene Location: 144-965 bp Feature: domain Description: EAL Location: 828-942 bp Feature: domain Description: EAL Location: 82 8-942 bp Feature: gene Location: 1602-3632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2010-2454 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 010-2 454 bp Feature: gene Location: 3632-6241 bp Feature: domain Description: FimD Location: 3689-6230 bp Feature: domain Description: FimD Location: 3689-62 30 bp Feature: gene Location: 6273-7001 bp Feature: domain Description: FimC Location: 6321-6984 bp Feature: domain Description: FimC Location: 632 1-6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAIWQ010000069.1 Klebsiella pneumoniae strain UCO513 NODE_69_length_810_cov_40.168375, whole genome shotgun sequence (810 bp)
Overview 1 RT 1: 2-359 bp Neighborhood of RT #1 [2, 751] RVT-GII Feature: gene Location: 2-751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-3 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWQ010000007.1 Klebsiella pneumoniae strain UCO513 NODE_7_length_219602_cov_12.416881, whole genome shotgun sequence (219602 bp)
Overview 1 RT 1: 215648-219597 bp Neighborhood of RT #1 [215648, 219599] PHA00080 Phage_GPA RVT-GII Feature: gene Location: 215648-215875 bp Feature: domain Description: PHA00080 Location: 215654-215867 bp Feature: domain Description: PHA00080 Location: 215654 -215867 bp Feature: gene Location: 215895-218024 bp Feature: domain Description: Phage_GPA Location: 216459-217422 bp Feature: domain Description: Phage_GPA Location: 2164 59-2174 22 bp Feature: gene Location: 218739-219599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219144-219597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21914 4 -219597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00080 (DksA-like zinc finger domain containing protein), Phage_GPA (pfam05840), RVT-GII