myRT

myRT report for GCA_011008855.1_ASM1100885v1

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Seq: JAAIWN010000107.1 Bacillus aquiflavi strain 3H-10 NODE_107_length_1308_cov_0.287014, whole genome shotgun sequence (1308 bp)
Overview 1 RT 1: 26-1206 bp Neighborhood of RT #1 [26, 1206] RVT-GII Feature: gene Location: 26-193 bp Feature: gene Location: 344-682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-656 bp Feature: gene Location: 1039-1206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWN010000117.1 Bacillus aquiflavi strain 3H-10 NODE_117_length_745_cov_0.343653, whole genome shotgun sequence (745 bp)
Overview 1 RT 1: 86-737 bp Neighborhood of RT #1 [86, 737] RVT-GII group_II_RT_mat Feature: gene Location: 86-250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-2 45 bp Feature: gene Location: 299-502 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 356-500 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 356-500 bp Feature: gene Location: 447-737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: JAAIWN010000001.1 Bacillus aquiflavi strain 3H-10 NODE_1_length_210881_cov_0.332144, whole genome shotgun sequence (210881 bp)
Overview 1 RT 1: 4367-10039 bp Neighborhood of RT #1 [4367, 10494] Pth DUF2757 RVT-GII GIIM DUF5082 YeeF Feature: gene Location: 4367-4930 bp Feature: domain Description: Pth Location: 4373-4925 bp Feature: domain Description: Pth Location: 43 73 -4925 bp Feature: gene Location: 5168-5398 bp Feature: domain Description: DUF2757 Location: 5171-5396 bp Feature: domain Description: DUF2757 Location: 5171-53 96 bp Feature: gene Location: 5966-7264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6272-6902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6272-6902 bp Feature: domain Description: GIIM Note: maturase Location: 6983-7205 bp Feature: domain Description: GIIM Note: maturase Location: 6983 -7205 bp Feature: gene Location: 7802-8230 bp Feature: domain Description: DUF5082 Location: 7838-8078 bp Feature: domain Description: DUF5082 Location: 783 8-8078 bp Feature: gene Location: 8518-10494 bp Feature: domain Description: YeeF Location: 8530-10039 bp Feature: domain Description: YeeF Location: 853 0-1003 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pth (COG0193), DUF2757 (pfam10955), RVT-GII, GIIM (pfam08388), DUF5082 (pfam16888), YeeF (COG5444)

Seq: JAAIWN010000029.1 Bacillus aquiflavi strain 3H-10 NODE_29_length_47946_cov_0.291241, whole genome shotgun sequence (47946 bp)
Overview 1 RT 1: 347-5093 bp Neighborhood of RT #1 [347, 5170] FACL_FadD13-like RVT-GII SppA Feature: gene Location: 347-1849 bp Feature: domain Description: FACL_FadD13-like Location: 371-1811 bp Feature: domain Description: FACL_FadD13-like Location: 371-1811 bp Feature: gene Location: 2477-3379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2687-3308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2687-3308 bp Feature: gene Location: 3492-3761 bp Feature: gene Location: 4163-5170 bp Feature: domain Description: SppA Location: 4304-5093 bp Feature: domain Description: SppA Location: 4 304 -5093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FACL_FadD13-like (cd17631), RVT-GII, SppA (COG0616)

Seq: JAAIWN010000032.1 Bacillus aquiflavi strain 3H-10 NODE_32_length_43115_cov_0.309536, whole genome shotgun sequence (43115 bp)
Overview 1 RT 1: 25101-29488 bp Neighborhood of RT #1 [25101, 29526] RVT-GII RVT-GII group_II_RT_mat GT4_PimA-like PRK09379 Feature: gene Location: 25101-25340 bp Feature: gene Location: 25792-25998 bp Feature: gene Location: 26004-26159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26109-26151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26109-2615 1 bp Feature: gene Location: 26164-26757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26167-26299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26167-26299 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 26317-26554 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 26317-265 5 4 bp Feature: gene Location: 27268-28374 bp Feature: domain Description: GT4_PimA-like Location: 27277-28225 bp Feature: domain Description: GT4_PimA-like Location: 27277-28225 bp Feature: gene Location: 28477-29526 bp Feature: domain Description: PRK09379 Location: 28579-29488 bp Feature: domain Description: PRK09379 Location: 285 79-29488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), GT4_PimA-like (cd03801), PRK09379 (LytR family transcriptional regulator)

Seq: JAAIWN010000046.1 Bacillus aquiflavi strain 3H-10 NODE_46_length_26311_cov_0.409927, whole genome shotgun sequence (26311 bp)
Overview 1 RT 1: 253-4973 bp Neighborhood of RT #1 [253, 5026] PRK05803 RVT-GII GIIM cysK prsA Feature: gene Location: 253-969 bp Feature: domain Description: PRK05803 Location: 262-949 bp Feature: domain Description: PRK05803 Location: 26 2-949 bp Feature: gene Location: 1225-2490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1426-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1426 -2041 bp Feature: domain Description: GIIM Note: maturase Location: 2095-2317 bp Feature: domain Description: GIIM Note: maturase Location: 2095-2317 bp Feature: gene Location: 3096-4025 bp Feature: domain Description: cysK Location: 3123-4008 bp Feature: domain Description: cysK Location: 3123-4008 bp Feature: gene Location: 4142-5026 bp Feature: domain Description: prsA Location: 4184-4973 bp Feature: domain Description: prsA Location: 4184-4973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05803 (RNA polymerase sporulation sigma factor SigK), RVT-GII, GIIM (pfam08388), cysK (TIGR01139), prsA (PRK04405)

Seq: JAAIWN010000050.1 Bacillus aquiflavi strain 3H-10 NODE_50_length_22734_cov_0.318887, whole genome shotgun sequence (22734 bp)
Overview 1 RT 1: 1670-15269 bp Neighborhood of RT #1 [1670, 15274] YeeA met_A_Alw26 met_A_Alw26 YeeA RVT-UNC TIGR02687 Lon_rel_chp Feature: gene Location: 1670-5242 bp Feature: gene Location: 5254-8760 bp Feature: domain Description: YeeA Location: 5872-6370 bp Feature: domain Description: YeeA Location: 587 2-637 0 bp Feature: domain Description: met_A_Alw26 Location: 6565-6733 bp Feature: domain Description: met_A_Alw26 Location: 6565-67 33 bp Feature: domain Description: met_A_Alw26 Location: 6757-7084 bp Feature: domain Description: met_A_Alw26 Location: 67 57 -7 084 bp Feature: domain Description: YeeA Location: 8167-8719 bp Feature: domain Description: YeeA Location: 8167 -87 19 bp Feature: gene Location: 8864-10405 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9254-9701 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9254-97 01 bp Feature: gene Location: 10634-13192 bp Feature: domain Description: TIGR02687 Location: 10688-13160 bp Feature: domain Description: TIGR02687 Location: 10688-13160 bp Feature: gene Location: 13217-15274 bp Feature: domain Description: Lon_rel_chp Location: 13250-15269 bp Feature: domain Description: Lon_rel_chp Location: 13250-15269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), met_A_Alw26 (TIGR02987), RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG8(RVT-UNC), TIGR02687 (TIGR02687 family protein), Lon_rel_chp (TIGR02653)

Seq: JAAIWN010000005.1 Bacillus aquiflavi strain 3H-10 NODE_5_length_122880_cov_0.280670, whole genome shotgun sequence (122880 bp)
Overview 1 RT 1: 88270-93571 bp Neighborhood of RT #1 [88270, 93573] RVT-GII Intron_maturas2 recA RNase_Y Feature: gene Location: 88270-88638 bp Feature: gene Location: 88936-89094 bp Feature: gene Location: 89218-90636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89440-90169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 9440-90169 bp Feature: domain Description: Intron_maturas2 Location: 90280-90523 bp Feature: domain Description: Intron_maturas2 Location: 9028 0-90523 bp Feature: gene Location: 90953-91246 bp Feature: domain Description: recA Location: 90956-91226 bp Feature: domain Description: recA Location: 90956-91226 bp Feature: gene Location: 92011-93573 bp Feature: domain Description: RNase_Y Location: 92035-93571 bp Feature: domain Description: RNase_Y Location: 92035-93571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), recA (PRK09519), RNase_Y (TIGR03319)

Seq: JAAIWN010000008.1 Bacillus aquiflavi strain 3H-10 NODE_8_length_101636_cov_0.284675, whole genome shotgun sequence (101636 bp)
Overview 1 RT 1: 2625-9108 bp Neighborhood of RT #1 [2625, 9176] PRK02304 recJ ssDNA-exonuc_C RVT-GII GIIM MS_channel Feature: gene Location: 2625-3137 bp Feature: domain Description: PRK02304 Location: 2628-3135 bp Feature: domain Description: PRK02304 Location: 2628-3135 bp Feature: gene Location: 3128-5503 bp Feature: domain Description: recJ Location: 3221-4823 bp Feature: domain Description: recJ Location: 3221-4823 bp Feature: domain Description: ssDNA-exonuc_C Location: 4841-5447 bp Feature: domain Description: ssDNA-exonuc_C Location: 4841-5447 bp Feature: gene Location: 5828-7030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6029-6632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6029 -6632 bp Feature: domain Description: GIIM Note: maturase Location: 6692-6905 bp Feature: domain Description: GIIM Note: maturase Location: 669 2-69 05 bp Feature: gene Location: 7784-8032 bp Feature: gene Location: 8079-9176 bp Feature: domain Description: MS_channel Location: 8502-9108 bp Feature: domain Description: MS_channel Location: 8502-9 108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02304 (adenine phosphoribosyltransferase; Provisional), recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), RVT-GII, GIIM (pfam08388), MS_channel (pfam00924)

Seq: JAAIWN010000009.1 Bacillus aquiflavi strain 3H-10 NODE_9_length_95055_cov_0.312197, whole genome shotgun sequence (95055 bp)
Overview 1 RT 1: 4281-9238 bp Neighborhood of RT #1 [4281, 9252] Peptidase_M56 YbxI Penicillinase_R RVT-GII speE agmatinase Feature: gene Location: 4281-6077 bp Feature: domain Description: Peptidase_M56 Location: 4308-5214 bp Feature: domain Description: Peptidase_M56 Location: 4308-5214 bp Feature: domain Description: YbxI Location: 5367-6060 bp Feature: domain Description: YbxI Location: 5367-6060 bp Feature: gene Location: 6077-6466 bp Feature: domain Description: Penicillinase_R Location: 6098-6437 bp Feature: domain Description: Penicillinase_R Location: 6098-6437 bp Feature: gene Location: 6628-6813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6634-6781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6634-6781 bp Feature: gene Location: 7450-8355 bp Feature: domain Description: speE Location: 7540-8335 bp Feature: domain Description: speE Location: 7540-8335 bp Feature: gene Location: 8380-9252 bp Feature: domain Description: agmatinase Location: 8413-9238 bp Feature: domain Description: agmatinase Location: 8413-9238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M56 (pfam05569), YbxI (COG2602), Penicillinase_R (pfam03965), RVT-GII, speE (TIGR00417), agmatinase (TIGR01230)