myRT

myRT report for GCA_011008895.1_ASM1100889v1

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Seq: JAAIWR010000010.1 Klebsiella pneumoniae strain UCO515 NODE_10_length_219602_cov_19.970202, whole genome shotgun sequence (219602 bp)
Overview 1 RT 1: 1-3106 bp Neighborhood of RT #1 [1, 3708] RVT-GII Phage_GPA Feature: gene Location: 1-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-856 bp Feature: gene Location: 870-1037 bp Feature: gene Location: 1579-3708 bp Feature: domain Description: Phage_GPA Location: 2143-3106 bp Feature: domain Description: Phage_GPA Location: 21 43-31 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_GPA (pfam05840)

Seq: JAAIWR010000112.1 Klebsiella pneumoniae strain UCO515 NODE_112_length_296_cov_32.082840, whole genome shotgun sequence (296 bp)
Overview 1 RT 1: 1-289 bp Neighborhood of RT #1 [1, 294] RVT-GII Feature: gene Location: 1-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-2 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAIWR010000035.1 Klebsiella pneumoniae strain UCO515 NODE_35_length_25521_cov_7.970269, whole genome shotgun sequence (25521 bp)
Overview 1 RT 1: 16123-19393 bp Neighborhood of RT #1 [16123, 19407] RVT-GII PRK10276 Feature: gene Location: 16123-16338 bp Feature: gene Location: 16605-16835 bp Feature: gene Location: 17069-18580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17474-18188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17474-18188 bp Feature: gene Location: 18631-18864 bp Feature: gene Location: 18982-19407 bp Feature: domain Description: PRK10276 Location: 18985-19393 bp Feature: domain Description: PRK10276 Location: 18985-193 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JAAIWR010000006.1 Klebsiella pneumoniae strain UCO515 NODE_6_length_272328_cov_21.885989, whole genome shotgun sequence (272328 bp)
Overview 1 RT 1: 144-6984 bp Neighborhood of RT #1 [144, 7001] EAL RVT-UG4 FimD FimC Feature: gene Location: 144-965 bp Feature: domain Description: EAL Location: 828-942 bp Feature: domain Description: EAL Location: 828-94 2 bp Feature: gene Location: 1602-3632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2010-2454 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2010-24 54 bp Feature: gene Location: 3632-6241 bp Feature: domain Description: FimD Location: 3689-6230 bp Feature: domain Description: FimD Location: 3689-6230 bp Feature: gene Location: 6273-7001 bp Feature: domain Description: FimC Location: 6321-6984 bp Feature: domain Description: FimC Location: 6321-6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAIWR010000082.1 Klebsiella pneumoniae strain UCO515 NODE_82_length_810_cov_63.023426, whole genome shotgun sequence (810 bp)
Overview 1 RT 1: 60-417 bp Neighborhood of RT #1 [60, 809] RVT-GII Feature: gene Location: 60-809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66-417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII