myRT

myRT report for GCA_011022025.1_ASM1102202v1

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Seq: SCVZ01000001.1 Citrobacter freundii strain L91, whole genome shotgun sequence (4951125 bp)
Overview 1 RT 1: 682669-687684 bp Neighborhood of RT #1 [682669, 687686] RVT-UG11 PRK10201 PRK13513 Feature: gene Location: 682669-683001 bp Feature: gene Location: 683178-683414 bp Feature: gene Location: 683983-684750 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 684115-684571 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 6841 1 5-684571 bp Feature: gene Location: 685152-685658 bp Feature: domain Description: PRK10201 Location: 685155-685653 bp Feature: domain Description: PRK1 0201 Location: 6851 55-685653 bp Feature: gene Location: 685689-687686 bp Feature: domain Description: PRK13513 Location: 685704-687684 bp Feature: domain Description: PRK1 351 3 Location: 685704-687684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK13513 (ligand-gated channel protein)

Seq: SCVZ01000003.1 Citrobacter freundii strain L91, whole genome shotgun sequence (51042 bp)
Overview 1 RT 1: 2858-7988 bp Neighborhood of RT #1 [2858, 8113] PRK15417 IMP_DIM-like_MBL-B1 RVT-GII GIIM MobC Rve Feature: gene Location: 2858-3871 bp Feature: domain Description: PRK15417 Location: 2861-3869 bp Feature: domain Description: PRK15417 Location: 2 861-3869 bp Feature: gene Location: 4024-4764 bp Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 4096-4717 bp Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 4096-4717 bp Feature: gene Location: 4854-6203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5136-5754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5136-5754 bp Feature: domain Description: GIIM Note: maturase Location: 5802-6006 bp Feature: domain Description: GIIM Note: maturase Location: 5802 -6006 bp Feature: gene Location: 6940-7206 bp Feature: domain Description: MobC Location: 6991-7111 bp Feature: domain Description: MobC Location: 6991-7111 bp Feature: gene Location: 7319-8113 bp Feature: domain Description: Rve Location: 7370-7988 bp Feature: domain Description: Rve Location: 7370-7988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), IMP_DIM-like_MBL-B1 (cd16301), RVT-GII, GIIM (pfam08388), MobC (pfam05713), Rve (COG3316)