myRT

myRT report for GCA_011028245.1_ASM1102824v1

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Seq: JAAJSJ010000035.1 Klebsiella pneumoniae strain KPM_43 NODE_35_length_41069_cov_35.4266, whole genome shotgun sequence (41069 bp)
Overview 1 RT 1: 2176-9044 bp Neighborhood of RT #1 [2176, 9046] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 2176-2904 bp Feature: domain Description: FimC Location: 2224-2887 bp Feature: domain Description: FimC Location: 2224-2887 bp Feature: gene Location: 2936-5545 bp Feature: domain Description: FimD Location: 2993-5534 bp Feature: domain Description: FimD Location: 2993-5534 bp Feature: gene Location: 5545-7623 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5953-6397 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5953-6397 bp Feature: gene Location: 7680-8120 bp Feature: domain Description: Integrase_1 Location: 7686-7902 bp Feature: domain Description: Integrase_1 Location: 7686-7902 bp Feature: gene Location: 8381-9046 bp Feature: domain Description: INT_P4_C Location: 8486-9044 bp Feature: domain Description: INT_P4_C Location: 8486-9044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAAJSJ010000039.1 Klebsiella pneumoniae strain KPM_43 NODE_39_length_32166_cov_67.9948, whole genome shotgun sequence (32166 bp)
Overview 1 RT 1: 16665-21687 bp Neighborhood of RT #1 [16665, 21695] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 16665-17630 bp Feature: domain Description: ArdC Location: 16791-17625 bp Feature: domain Description: ArdC Location: 16791-1762 5 bp Feature: gene Location: 17762-18031 bp Feature: gene Location: 18100-19587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18505-19195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18505-19195 bp Feature: gene Location: 19741-20424 bp Feature: domain Description: PRK10276 Location: 20044-20407 bp Feature: domain Description: PRK102 76 Location: 2 0044-2 0407 bp Feature: gene Location: 20424-21695 bp Feature: domain Description: umuC Location: 20427-21687 bp Feature: domain Description: umuC Location: 2 042 7-2 1687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)