myRT

myRT report for GCA_011029425.1_ASM1102942v1

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Seq: JAAJRW010000014.1 Klebsiella pneumoniae strain KPM_58 NODE_14_length_151779_cov_22.6941, whole genome shotgun sequence (151779 bp)
Overview 1 RT 1: 112886-119754 bp Neighborhood of RT #1 [112886, 119756] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112886-113614 bp Feature: domain Description: FimC Location: 112934-113597 bp Feature: domain Description: FimC Location: 1 1 2934-1 1 3597 bp Feature: gene Location: 113646-116255 bp Feature: domain Description: FimD Location: 113703-116244 bp Feature: domain Description: FimD Location: 1 1 3703-1 1 6244 bp Feature: gene Location: 116255-118333 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116663-117107 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6663-1 1 71 07 bp Feature: gene Location: 118390-118830 bp Feature: domain Description: Integrase_1 Location: 118396-118612 bp Feature: domain Description: Integrase_1 Location: 1 1 8396-1 1 861 2 bp Feature: gene Location: 119091-119756 bp Feature: domain Description: INT_P4_C Location: 119196-119754 bp Feature: domain Description: INT_P4_C Location: 1 1 91 96-1 1 9754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAAJRW010000034.1 Klebsiella pneumoniae strain KPM_58 NODE_34_length_12950_cov_55.5054, whole genome shotgun sequence (12950 bp)
Overview 1 RT 1: 9638-12712 bp Neighborhood of RT #1 [9638, 12712] PRK10276 RVT-GII InsA Feature: gene Location: 9638-10450 bp Feature: domain Description: PRK10276 Location: 10070-10433 bp Feature: domain Description: PRK102 76 Location: 10070-10433 bp Feature: gene Location: 10475-10840 bp Feature: gene Location: 10952-11962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10958-11570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10958-11570 bp Feature: gene Location: 12114-12389 bp Feature: domain Description: InsA Location: 12117-12381 bp Feature: domain Description: InsA Location: 12 117-12 381 bp Feature: gene Location: 12482-12712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677)