myRT

myRT report for GCA_011029555.1_ASM1102955v1

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Seq: JAAJSD010000010.1 Escherichia coli strain ECM_50 NODE_10_length_173222_cov_31.5952, whole genome shotgun sequence (173222 bp)
Overview 1 RT 1: 24045-28336 bp Neighborhood of RT #1 [24045, 28336] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 24045-25307 bp Feature: domain Description: YesM Location: 24558-25299 bp Feature: domain Description: YesM Location: 24558-25299 bp Feature: gene Location: 25337-25507 bp Feature: gene Location: 25857-26378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25863-26145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25863-261 45 bp Feature: domain Description: GIIM Note: maturase Location: 26193-26373 bp Feature: domain Description: GIIM Note: maturase Location: 261 93-26373 bp Feature: gene Location: 26406-26945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26736-26814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26736-2681 4 bp Feature: gene Location: 26976-27173 bp Feature: gene Location: 27431-28336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JAAJSD010000001.1 Escherichia coli strain ECM_50 NODE_1_length_310193_cov_30.7733, whole genome shotgun sequence (310193 bp)
Overview 1 RT 1: 1440-4910 bp Neighborhood of RT #1 [1440, 5017] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 1440-1742 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1449-1701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1449-1701 bp Feature: gene Location: 1926-2171 bp Feature: gene Location: 2197-3129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2299-2893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 99-2 893 bp Feature: gene Location: 3131-4117 bp Feature: gene Location: 4745-5017 bp Feature: domain Description: PRK09678 Location: 4754-4910 bp Feature: domain Description: PRK09678 Location: 4754-4910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JAAJSD010000077.1 Escherichia coli strain ECM_50 NODE_77_length_2272_cov_195.589, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)