myRT

myRT report for GCA_011029605.1_ASM1102960v1

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Seq: JAAJSE010000024.1 Escherichia coli strain ECM_49 NODE_24_length_77357_cov_31.1325, whole genome shotgun sequence (77357 bp)
Overview 1 RT 1: 925-4395 bp Neighborhood of RT #1 [925, 4502] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 925-1227 bp Feature: domain Description: Arm-DNA-bind_3 Location: 934-1186 bp Feature: domain Description: Arm-DNA-bind_3 Location: 934-1 1 86 bp Feature: gene Location: 1411-1656 bp Feature: gene Location: 1682-2614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1784-2378 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 784-2378 bp Feature: gene Location: 2616-3602 bp Feature: gene Location: 4230-4502 bp Feature: domain Description: PRK09678 Location: 4239-4395 bp Feature: domain Description: PRK09678 Location: 4239-4395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JAAJSE010000002.1 Escherichia coli strain ECM_49 NODE_2_length_272530_cov_30.7721, whole genome shotgun sequence (272530 bp)
Overview 1 RT 1: 149251-153534 bp Neighborhood of RT #1 [149251, 153542] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 149251-150156 bp Feature: gene Location: 150294-150485 bp Feature: gene Location: 150642-151181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150972-151050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150972 -151050 bp Feature: gene Location: 151209-151730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151215-151497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1512 15-151497 bp Feature: domain Description: GIIM Note: maturase Location: 151545-151725 bp Feature: domain Description: GIIM Note: maturase Location: 151545-15172 5 bp Feature: gene Location: 152052-152240 bp Feature: gene Location: 152280-153542 bp Feature: domain Description: YesM Location: 152793-153534 bp Feature: domain Description: YesM Location: 152 793-153534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JAAJSE010000095.1 Escherichia coli strain ECM_49 NODE_95_length_2206_cov_191.299, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 93-2203 bp Neighborhood of RT #1 [93, 2203] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)