myRT

myRT report for GCA_011029935.1_ASM1102993v1

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Seq: JAAJSY010000022.1 Klebsiella pneumoniae strain KPM_25 NODE_22_length_70191_cov_24.0335, whole genome shotgun sequence (70191 bp)
Overview 1 RT 1: 17920-21104 bp Neighborhood of RT #1 [17920, 21104] PRK10276 RVT-GII Feature: gene Location: 17920-18345 bp Feature: domain Description: PRK10276 Location: 17923-18331 bp Feature: domain Description: PRK1 0276 Location: 1 7923-1 8331 bp Feature: gene Location: 18463-18696 bp Feature: gene Location: 18747-20258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19152-19866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 52-1 9866 bp Feature: gene Location: 20144-20722 bp Feature: gene Location: 20781-21104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JAAJSY010000025.1 Klebsiella pneumoniae strain KPM_25 NODE_25_length_42995_cov_20.5306, whole genome shotgun sequence (42995 bp)
Overview 1 RT 1: 1937-11549 bp Neighborhood of RT #1 [1937, 11665] COG2958 AAA_15 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 1937-2869 bp Feature: domain Description: COG2958 Location: 1955-2849 bp Feature: domain Description: COG2 958 Location: 1955-2 849 bp Feature: gene Location: 3420-5561 bp Feature: domain Description: AAA_15 Location: 3447-3864 bp Feature: domain Description: AAA_15 Location: 3447-3864 bp Feature: domain Description: AAA_15 Location: 4002-4428 bp Feature: domain Description: AAA_15 Location: 4002 -442 8 bp Feature: gene Location: 5734-6834 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5875-6439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5875-6439 bp Feature: gene Location: 7375-10494 bp Feature: domain Description: COG0610 Location: 7459-10471 bp Feature: domain Description: COG0610 Location: 7459-10471 bp Feature: gene Location: 10487-11665 bp Feature: domain Description: AAA_13 Location: 10580-10754 bp Feature: domain Description: AAA_13 Location: 10580-10754 bp Feature: domain Description: AAA_13 Location: 10976-11549 bp Feature: domain Description: AAA_13 Location: 10976-11549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2958 (Uncharacterized protein ), AAA_15 (pfam13175), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )