myRT

myRT report for GCA_011030025.1_ASM1103002v1

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Seq: JAAJTE010000011.1 Escherichia coli strain ECM_18 NODE_11_length_127276_cov_61.0502, whole genome shotgun sequence (127276 bp)
Overview 1 RT 1: 25492-28557 bp Neighborhood of RT #1 [25492, 28557] RVT-GII GIIM RVT-GII Feature: gene Location: 25492-25662 bp Feature: gene Location: 25800-25979 bp Feature: gene Location: 26078-26599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26084-26366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26084-26366 bp Feature: domain Description: GIIM Note: maturase Location: 26414-26594 bp Feature: domain Description: GIIM Note: maturase Location: 2641 4-26594 bp Feature: gene Location: 26627-27166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26957-27035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26957-27035 bp Feature: gene Location: 27197-27394 bp Feature: gene Location: 27652-28557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAJTE010000009.1 Escherichia coli strain ECM_18 NODE_9_length_163016_cov_56.4953, whole genome shotgun sequence (163016 bp)
Overview 1 RT 1: 127745-133776 bp Neighborhood of RT #1 [127745, 133776] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127745-128665 bp Feature: domain Description: AbiEii Location: 127787-128528 bp Feature: domain Description: AbiEii Location: 12 7787-12 852 8 bp Feature: gene Location: 128652-129455 bp Feature: domain Description: AbiEi_3_N Location: 128685-128946 bp Feature: domain Description: AbiEi_3_N Location: 12 8685-12 8946 bp Feature: domain Description: AbiEi_3 Location: 128958-129414 bp Feature: domain Description: AbiEi_3 Location: 12 8958-12 9414 bp Feature: gene Location: 129750-132959 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130278-130767 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1302 78-130767 bp Feature: domain Description: nitrilase Location: 132273-132870 bp Feature: domain Description: nitrilase Location: 132 2 73-132 870 bp Feature: gene Location: 133120-133260 bp Feature: domain Description: Phage_ASH Location: 133147-133240 bp Feature: domain Description: Phage_ASH Location: 133147-1332 40 bp Feature: gene Location: 133306-133776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)