myRT

myRT report for GCA_011030165.1_ASM1103016v1

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Seq: JAAJRF010000002.1 Enterobacter hormaechei strain EHM_79 NODE_2_length_866014_cov_14.7535, whole genome shotgun sequence (866014 bp)
Overview 1 RT 1: 621931-627446 bp Neighborhood of RT #1 [621931, 627559] FocA PRK09692 RVT-Retrons Ogr_Delta Feature: gene Location: 621931-622860 bp Feature: domain Description: FocA Location: 622024-622801 bp Feature: domain Description: FocA Location: 622024-622801 bp Feature: gene Location: 623171-624337 bp Feature: domain Description: PRK09692 Location: 623180-624329 bp Feature: domain Description: PRK09692 Location: 6231 80-624329 bp Feature: gene Location: 625380-626564 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 625530-626109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 625530-6261 09 bp Feature: gene Location: 626870-627091 bp Feature: gene Location: 627287-627559 bp Feature: domain Description: Ogr_Delta Location: 627311-627446 bp Feature: domain Description: Ogr_Delta Location: 62731 1 -627446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606)

Seq: JAAJRF010000004.1 Enterobacter hormaechei strain EHM_79 NODE_4_length_394952_cov_16.3526, whole genome shotgun sequence (394952 bp)
Overview 1 RT 1: 38243-48165 bp Neighborhood of RT #1 [38243, 48269] TIGR02687 YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 38243-40846 bp Feature: domain Description: TIGR02687 Location: 38261-40814 bp Feature: domain Description: TIGR02 687 Location: 382 61-40814 bp Feature: gene Location: 41055-42830 bp Feature: domain Description: YeeA Location: 41106-42762 bp Feature: domain Description: YeeA Location: 41106-42 762 bp Feature: gene Location: 42830-45832 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 43292-43778 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 432 92 -43778 bp Feature: domain Description: nitrilase Location: 45044-45734 bp Feature: domain Description: nitrilase Location: 45044-45734 bp Feature: gene Location: 45863-46312 bp Feature: gene Location: 46335-48269 bp Feature: domain Description: YeeA Location: 46974-47685 bp Feature: domain Description: YeeA Location: 46974-47685 bp Feature: domain Description: YeeA Location: 47841-48165 bp Feature: domain Description: YeeA Location: 47841-48165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)