myRT

myRT report for GCA_011032285.1_ASM1103228v1

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Seq: JAAKCE010000015.1 Escherichia coli strain CAP27 contig00015, whole genome shotgun sequence (120701 bp)
Overview 1 RT 1: 7120-10192 bp Neighborhood of RT #1 [7120, 10192] CbeA_antitoxin CbtA_toxin RVT-UG28 Feature: gene Location: 7120-7485 bp Feature: domain Description: CbeA_antitoxin Location: 7171-7471 bp Feature: domain Description: CbeA_antitoxin Location: 71 71 -7471 bp Feature: gene Location: 7524-7841 bp Feature: domain Description: CbtA_toxin Location: 7527-7833 bp Feature: domain Description: CbtA_toxin Location: 7527-7833 bp Feature: gene Location: 8145-9647 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 8433-9072 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 8433-9072 bp Feature: gene Location: 9738-9983 bp Feature: gene Location: 9995-10192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), CbtA_toxin (pfam06755), RVT-UG28

Seq: JAAKCE010000016.1 Escherichia coli strain CAP27 contig00016, whole genome shotgun sequence (119799 bp)
Overview 1 RT 1: 112028-115251 bp Neighborhood of RT #1 [112028, 115301] PyrBI_leader RVT-GII GIIM RVT-GII PRK09183 Feature: gene Location: 112028-112240 bp Feature: domain Description: PyrBI_leader Location: 112112-112238 bp Feature: domain Description: PyrBI_leader Location: 112 112 -112 2 38 bp Feature: gene Location: 112243-112461 bp Feature: gene Location: 112711-113481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112714-113128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 714-11312 8 bp Feature: domain Description: GIIM Note: maturase Location: 113179-113344 bp Feature: domain Description: GIIM Note: maturase Location: 113179-113344 bp Feature: gene Location: 113520-114002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113841-113928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113841-11392 8 bp Feature: gene Location: 113985-114464 bp Feature: gene Location: 114504-115301 bp Feature: domain Description: PRK09183 Location: 114516-115251 bp Feature: domain Description: PRK09183 Location: 114516-1152 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyrBI_leader (pfam08052), RVT-GII, GIIM (pfam08388), PRK09183 (transposase/IS protein; Provisional)