myRT

myRT report for GCA_011038555.1_ASM1103855v1

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Seq: JAAKFZ010000001.1 Streptococcus equi subsp. ruminatorum strain FJ1804 contig_1_len_195640, whole genome shotgun sequence (195640 bp)
Overview 1 RT 1: 77117-85692 bp Neighborhood of RT #1 [77117, 85742] PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF VirD2 Streptin-Immun RVT-GII Intron_maturas2 VirD2 MobC Feature: gene Location: 77117-80770 bp Feature: domain Description: PLDc_N_DEXD_c Location: 77537-77981 bp Feature: domain Description: PLDc_N_DEXD_c Location: 77537-77981 bp Feature: domain Description: DEXDc_RapA Location: 78257-78824 bp Feature: domain Description: DEXDc_RapA Location: 78257-78824 bp Feature: domain Description: SF2_C_SNF Location: 79451-80018 bp Feature: domain Description: SF2_C_SNF Location: 79451 -8001 8 bp Feature: gene Location: 81099-82511 bp Feature: domain Description: VirD2 Location: 81105-81756 bp Feature: domain Description: VirD2 Location: 81 1 05-81 756 bp Feature: domain Description: Streptin-Immun Location: 82194-82470 bp Feature: domain Description: Streptin-Immun Location: 821 94-82470 bp Feature: gene Location: 82692-84494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82968-83772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82968-83772 bp Feature: domain Description: Intron_maturas2 Location: 83856-84159 bp Feature: domain Description: Intron_maturas2 Location: 83856-841 59 bp Feature: gene Location: 85031-85459 bp Feature: domain Description: VirD2 Location: 85043-85424 bp Feature: domain Description: VirD2 Location: 85043-85424 bp Feature: gene Location: 85446-85742 bp Feature: domain Description: MobC Location: 85563-85692 bp Feature: domain Description: MobC Location: 85563-85692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), VirD2 (COG3843), Streptin-Immun (pfam11083), RVT-GII, Intron_maturas2 (pfam01348), MobC (pfam05713)

Seq: JAAKFZ010000041.1 Streptococcus equi subsp. ruminatorum strain FJ1804 contig_41_len_2248, whole genome shotgun sequence (2248 bp)
Overview 1 RT 1: 529-1861 bp Neighborhood of RT #1 [529, 2226] RVT_N RVT-GII GIIM Feature: gene Location: 529-2226 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT_N Location: 62 5-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Feature: domain Description: GIIM Note: maturase Location: 1642 -1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)