myRT

myRT report for GCA_011039205.1_ASM1103920v1

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Seq: JAAKEL010000017.1 Dysgonomonas sp. ZJ279 Scaffold16_1, whole genome shotgun sequence (72934 bp)
Overview 1 RT 1: 1038-3838 bp Neighborhood of RT #1 [1038, 3838] RVT-DGRs Feature: gene Location: 1038-1286 bp Feature: gene Location: 1437-1754 bp Feature: gene Location: 1726-2724 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1936-2521 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 936-2521 bp Feature: gene Location: 2932-3327 bp Feature: gene Location: 3347-3838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAAKEL010000031.1 Dysgonomonas sp. ZJ279 Scaffold30_1, whole genome shotgun sequence (22035 bp)
Overview 1 RT 1: 6658-11132 bp Neighborhood of RT #1 [6658, 11182] HTH_45 RVT-Retrons Phage_int_SAM_5 INTN1_C_like RlpA Feature: gene Location: 6658-7500 bp Feature: gene Location: 7501-7854 bp Feature: domain Description: HTH_45 Location: 7594-7714 bp Feature: domain Description: HTH_45 Location: 7594-7714 bp Feature: gene Location: 8077-9096 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8302-8845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8302 -8845 bp Feature: gene Location: 9295-10467 bp Feature: domain Description: Phage_int_SAM_5 Location: 9607-9892 bp Feature: domain Description: Phage_int_SAM_5 Location: 9607-9892 bp Feature: domain Description: INTN1_C_like Location: 9937-10432 bp Feature: domain Description: INTN1_C_like Location: 9937-10432 bp Feature: gene Location: 10790-11182 bp Feature: domain Description: RlpA Location: 10850-11132 bp Feature: domain Description: RlpA Location: 10850-11132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), HTH_45 (pfam14947), RVT-Retrons, Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)