myRT

myRT report for GCA_011044855.1_ASM1104485v1

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Seq: JAAKYL010000015.1 Klebsiella pneumoniae strain 2501 NODE_15_length_195495_cov_43.123255, whole genome shotgun sequence (195495 bp)
Overview 1 RT 1: 110230-117083 bp Neighborhood of RT #1 [110230, 117100] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 110230-110895 bp Feature: domain Description: INT_P4_C Location: 110335-110893 bp Feature: domain Description: INT_P4_C Location: 1 1 0335-1 1 0893 bp Feature: gene Location: 111156-111596 bp Feature: domain Description: Integrase_1 Location: 111162-111378 bp Feature: domain Description: Integrase_1 Location: 1 1 1 1 62-1 1 1 378 bp Feature: gene Location: 111653-113731 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 112061-112505 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 2061 -1 1 2505 bp Feature: gene Location: 113731-116340 bp Feature: domain Description: FimD Location: 113788-116329 bp Feature: domain Description: FimD Location: 1 1 3788-1 1 6329 bp Feature: gene Location: 116372-117100 bp Feature: domain Description: FimC Location: 116420-117083 bp Feature: domain Description: FimC Location: 1 1 6420-1 1 7083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAKYL010000067.1 Klebsiella pneumoniae strain 2501 NODE_67_length_1914_cov_252.451595, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII