myRT

myRT report for GCA_011045025.1_ASM1104502v1

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Seq: JAAKZX010000253.1 Streptomyces sp. YC419 YC419_contig_253_length_12229_coverage_123.8_1.05, whole genome shotgun sequence (12229 bp)
Overview 1 RT 1: 5976-11918 bp Neighborhood of RT #1 [5976, 11980] HTH_17 Transposase_mut RVT-GII GIIM HNH RVT-GII Intron_maturas2 HNHc Feature: gene Location: 5976-6311 bp Feature: domain Description: HTH_17 Location: 6069-6225 bp Feature: domain Description: HTH_1 7 Location: 6069-6225 bp Feature: gene Location: 7375-8688 bp Feature: domain Description: Transposase_mut Location: 7477-8593 bp Feature: domain Description: Transposase_mut Location: 7477-8593 bp Feature: gene Location: 8685-10055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8691-9285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8691 -9285 bp Feature: domain Description: GIIM Note: maturase Location: 9339-9570 bp Feature: domain Description: GIIM Note: maturase Location: 9339-9570 bp Feature: domain Description: HNH Note: nucleases Location: 9891-9993 bp Feature: domain Description: HNH Note: nucleases Location: 9891 -9993 bp Feature: gene Location: 10178-11980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10439-11231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0439-1 1 231 bp Feature: domain Description: Intron_maturas2 Location: 11342-11564 bp Feature: domain Description: Intron_maturas2 Location: 1 1 342-1 1 564 bp Feature: domain Description: HNHc Note: nucleases Location: 11765-11918 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 765-1 1 91 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Intron_maturas2 (pfam01348), HNHc (smart00507)