myRT

myRT report for GCA_011045165.1_ASM1104516v1

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Seq: JAAKZI010000011.1 Arthrobacter silviterrae strain DSM 27180, whole genome shotgun sequence (113238 bp)
Overview 1 RT 1: 3185-7592 bp Neighborhood of RT #1 [3185, 7630] RVT-Retrons Ad_Cy_reg CHD Feature: gene Location: 3185-3952 bp Feature: gene Location: 4327-4590 bp Feature: gene Location: 4593-5963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5112-5736 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 1 2-5736 bp Feature: gene Location: 5971-6456 bp Feature: gene Location: 6551-7630 bp Feature: domain Description: Ad_Cy_reg Location: 6626-7022 bp Feature: domain Description: Ad_Cy_reg Location: 6626-7022 bp Feature: domain Description: CHD Location: 7133-7592 bp Feature: domain Description: CHD Location: 71 33-7592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Ad_Cy_reg (pfam16701), CHD (cd07302)

Seq: JAAKZI010000042.1 Arthrobacter silviterrae strain DSM 27180, whole genome shotgun sequence (30410 bp)
Overview 1 RT 1: 19381-24752 bp Neighborhood of RT #1 [19381, 24752] HTH_23 HTH_28 rve RVT-GII Intron_maturas2 HNHc Mu-transpos_C Feature: gene Location: 19381-20028 bp Feature: domain Description: HTH_23 Location: 19663-19756 bp Feature: domain Description: HTH_2 3 Location: 19663-19756 bp Feature: gene Location: 19877-21130 bp Feature: domain Description: HTH_28 Location: 20405-20480 bp Feature: domain Description: HTH_2 8 Location: 2 0405-2 0480 bp Feature: domain Description: rve Location: 20696-21011 bp Feature: domain Description: rve Location: 2 0696-2 1011 bp Feature: gene Location: 21545-23296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21806-22601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1806-2 2 601 bp Feature: domain Description: Intron_maturas2 Location: 22718-22934 bp Feature: domain Description: Intron_maturas2 Location: 2 2 718-2 2 934 bp Feature: domain Description: HNHc Note: nucleases Location: 23114-23276 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3114-2 32 76 bp Feature: gene Location: 23218-24072 bp Feature: domain Description: Mu-transpos_C Location: 23683-23839 bp Feature: domain Description: Mu-transpos_C Location: 2 3683-2 3839 bp Feature: gene Location: 24597-24752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_28 (pfam13518), rve (pfam00665), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Mu-transpos_C (pfam09299)

Seq: JAAKZI010000075.1 Arthrobacter silviterrae strain DSM 27180, whole genome shotgun sequence (1806 bp)
Overview 1 RT 1: 464-1658 bp Neighborhood of RT #1 [464, 1804] RVT-GII GIIM Feature: gene Location: 464-1804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-13 91 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1658 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)