myRT

myRT report for GCA_011046315.1_ASM1104631v1

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Seq: DSAU01000140.1 TPA_asm: bacterium isolate SpSt-1156 Ga0129302_1001042, whole genome shotgun sequence (20789 bp)
Overview 1 RT 1: 1-7229 bp Neighborhood of RT #1 [1, 7229] YprA YprA DUF1998 RVT-GII Feature: gene Location: 1-4491 bp Feature: domain Description: YprA Location: 40-739 bp Feature: domain Description: YprA Location: 40-739 bp Feature: domain Description: YprA Location: 2614-3010 bp Feature: domain Description: YprA Location: 261 4-301 0 bp Feature: domain Description: DUF1998 Location: 4156-4405 bp Feature: domain Description: DUF1 998 Location: 41 56-4405 bp Feature: gene Location: 5183-6610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5582-6263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5582-6263 bp Feature: gene Location: 6745-7011 bp Feature: gene Location: 7029-7229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YprA (COG1205), DUF1998 (pfam09369), RVT-GII

Seq: DSAU01000378.1 TPA_asm: bacterium isolate SpSt-1156 Ga0129302_1025243, whole genome shotgun sequence (2738 bp)
Overview 1 RT 1: 1-2730 bp Neighborhood of RT #1 [1, 2735] YfmG Avd_like RVT-DGRs PEGA Feature: gene Location: 1-207 bp Feature: domain Description: YfmG Location: 4-202 bp Feature: domain Description: YfmG Location: 4-2 02 bp Feature: gene Location: 337-702 bp Feature: domain Description: Avd_like Location: 367-670 bp Feature: domain Description: Avd_like Location: 367-670 bp Feature: gene Location: 686-1777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 902-1541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 902 -1541 bp Feature: gene Location: 1820-2185 bp Feature: gene Location: 2175-2735 bp Feature: domain Description: PEGA Location: 2583-2730 bp Feature: domain Description: PEGA Location: 2 583-2 730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), PEGA (pfam08308), Avd_like (cd16376), RVT-DGRs