myRT

myRT report for GCA_011046395.1_ASM1104639v1

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Seq: DSAQ01000238.1 TPA_asm: Proteobacteria bacterium isolate SpSt-1152 Ga0129302_1003033, whole genome shotgun sequence (11727 bp)
Overview 1 RT 1: 6874-11186 bp Neighborhood of RT #1 [6874, 11221] Cas6_III YcjD RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 6874-7932 bp Feature: domain Description: Cas6_III Location: 6946-7852 bp Feature: domain Description: Cas6_III Location: 6946-7852 bp Feature: gene Location: 7943-8341 bp Feature: domain Description: YcjD Location: 7955-8291 bp Feature: domain Description: YcjD Location: 7955-8291 bp Feature: gene Location: 8349-10634 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8556-9168 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8556-91 68 bp Feature: domain Description: Cas1_I-II-III Location: 9633-10596 bp Feature: domain Description: Cas1 _I-II-III Location: 9633-1 0596 bp Feature: gene Location: 10943-11221 bp Feature: domain Description: Cas2_I_II_III Location: 10958-11186 bp Feature: domain Description: Cas2_I_II_III Location: 1 0958-1 1 1 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6_III (cd09760), YcjD (COG2852), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: DSAQ01000214.1 TPA_asm: Proteobacteria bacterium isolate SpSt-1152 Ga0129302_1003359, whole genome shotgun sequence (11042 bp)
Overview 1 RT 1: 2-7287 bp Neighborhood of RT #1 [2, 7520] RVT-GII MATE_Wzx_like Feature: gene Location: 2-298 bp Feature: gene Location: 805-4368 bp Feature: gene Location: 4472-5134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4475-5036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4475-5036 bp Feature: gene Location: 5336-5848 bp Feature: gene Location: 6066-7520 bp Feature: domain Description: MATE_Wzx_like Location: 6096-7287 bp Feature: domain Description: MATE_Wzx_like Location: 6096-72 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MATE_Wzx_like (cd13128)

Seq: DSAQ01000127.1 TPA_asm: Proteobacteria bacterium isolate SpSt-1152 Ga0129302_1010051, whole genome shotgun sequence (5401 bp)
Overview 1 RT 1: 2487-5162 bp Neighborhood of RT #1 [2487, 5296] RVT_N RVT-GII GIIM Feature: gene Location: 2487-3035 bp Feature: gene Location: 3550-3735 bp Feature: gene Location: 3806-5296 bp Feature: domain Description: RVT_N Location: 3965-4208 bp Feature: domain Description: RVT_N Location: 3 965-4208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4253-4874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4253 -4874 bp Feature: domain Description: GIIM Note: maturase Location: 4937-5162 bp Feature: domain Description: GIIM Note: maturase Location: 493 7-5162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: DSAQ01000173.1 TPA_asm: Proteobacteria bacterium isolate SpSt-1152 Ga0129302_1015786, whole genome shotgun sequence (3869 bp)
Overview 1 RT 1: 2-3402 bp Neighborhood of RT #1 [2, 3770] HisKA_7TM BaeS RVT-GII Feature: gene Location: 2-1948 bp Feature: domain Description: HisKA_7TM Location: 11-494 bp Feature: domain Description: HisKA_7TM Location: 11-4 94 bp Feature: domain Description: BaeS Location: 1100-1937 bp Feature: domain Description: BaeS Location: 1100-1937 bp Feature: gene Location: 2070-3770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2715-3402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2715-34 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisKA_7TM (pfam16927), BaeS (COG0642), RVT-GII

Seq: DSAQ01000182.1 TPA_asm: Proteobacteria bacterium isolate SpSt-1152 Ga0129302_1028414, whole genome shotgun sequence (2504 bp)
Overview 1 RT 1: 2-2042 bp Neighborhood of RT #1 [2, 2410] SalY RVT-GII Feature: gene Location: 2-457 bp Feature: domain Description: SalY Location: 17-455 bp Feature: domain Description: SalY Location: 17-45 5 bp Feature: gene Location: 507-788 bp Feature: gene Location: 902-2410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1355-2042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135 5 -2042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SalY (COG0577), RVT-GII