myRT

myRT report for GCA_011048485.1_ASM1104848v1

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Seq: DSDX01000091.1 TPA_asm: Candidatus Aminicenantes bacterium isolate SpSt-1229 Ga0116197_1000778, whole genome shotgun sequence (6326 bp)
Overview 1 RT 1: 1-6225 bp Neighborhood of RT #1 [1, 6323] Rotamase_3 OMP_b-brl_2 RVT-GII GIIM KOG4058 sulfatase_like SGSH TPR TPR TPR Feature: gene Location: 1-612 bp Feature: domain Description: Rotamase_3 Location: 163-478 bp Feature: domain Description: Rotamase_3 Location: 1 63-478 bp Feature: gene Location: 783-1406 bp Feature: domain Description: OMP_b-brl_2 Location: 861-1332 bp Feature: domain Description: OMP_b-brl_2 Location: 861 -1 332 bp Feature: gene Location: 2008-3249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2200-2821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2200-2821 bp Feature: domain Description: GIIM Note: maturase Location: 2872-3094 bp Feature: domain Description: GIIM Note: maturase Location: 2872-3094 bp Feature: gene Location: 3350-4207 bp Feature: domain Description: KOG4058 Location: 3752-4163 bp Feature: domain Description: KOG4058 Location: 3752-41 63 bp Feature: gene Location: 4266-6323 bp Feature: domain Description: sulfatase_like Location: 4278-4818 bp Feature: domain Description: sulfatase_like Location: 4278-481 8 bp Feature: domain Description: SGSH Location: 4944-5043 bp Feature: domain Description: SGSH Location: 4944-5043 bp Feature: domain Description: TPR Location: 5418-5679 bp Feature: domain Description: TPR Location: 541 8-5679 bp Feature: domain Description: TPR Location: 5727-5958 bp Feature: domain Description: TPR Location: 5727-5958 bp Feature: domain Description: TPR Location: 5988-6225 bp Feature: domain Description: TPR Location: 5988-6225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rotamase_3 (pfam13616), RVT-GII, GIIM (pfam08388), KOG4058 (KOG4058, Uncharacterized conserved protein ), sulfatase_like (cd16156), SGSH (cd16027), TPR (smart00028), OMP_b-brl_2 (pfam13568)