myRT

myRT report for GCA_011049865.1_ASM1104986v1

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Seq: DRGY01000052.1 TPA_asm: Marinobacter antarcticus isolate HyVt-357 HyVt-357_k145_390029, whole genome shotgun sequence (32928 bp)
Overview 1 RT 1: 10675-15802 bp Neighborhood of RT #1 [10675, 15802] T5orf172 HATPase_c_3 RVT-UG2 Feature: gene Location: 10675-11850 bp Feature: domain Description: T5orf172 Location: 11506-11773 bp Feature: domain Description: T5orf1 72 Location: 1 1 506-1 1 773 bp Feature: gene Location: 11932-13791 bp Feature: domain Description: HATPase_c_3 Location: 11995-12328 bp Feature: domain Description: HATPase_c_3 Location: 1 1 995-1 2328 bp Feature: gene Location: 14021-15343 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14258-15047 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 4258-1 5047 bp Feature: gene Location: 15432-15563 bp Feature: gene Location: 15578-15802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T5orf172 (smart00974), HATPase_c_3 (pfam13589), RVT-UG2

Seq: DRGY01000118.1 TPA_asm: Marinobacter antarcticus isolate HyVt-357 HyVt-357_k145_75518, whole genome shotgun sequence (38048 bp)
Overview 1 RT 1: 22539-25504 bp Neighborhood of RT #1 [22539, 25527] PHA02517 RVT-GII GIIM PHA02517 HTH_XRE Feature: gene Location: 22539-22691 bp Feature: domain Description: PHA02517 Location: 22554-22626 bp Feature: domain Description: PHA02 517 Location: 2 2 554-2 2 62 6 bp Feature: gene Location: 23140-23289 bp Feature: gene Location: 23286-24809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23559-24291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3559-2 42 91 bp Feature: domain Description: GIIM Note: maturase Location: 24411-24591 bp Feature: domain Description: GIIM Note: maturase Location: 2 4411-2 4591 bp Feature: gene Location: 24938-25273 bp Feature: domain Description: PHA02517 Location: 24941-25262 bp Feature: domain Description: PHA02 517 Location: 2 4941-2 52 62 bp Feature: gene Location: 25396-25527 bp Feature: domain Description: HTH_XRE Location: 25423-25504 bp Feature: domain Description: HTH_XRE Location: 2 542 3-2 5504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)