myRT

myRT report for GCA_011050055.1_ASM1105005v1

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Seq: DRGM01000187.1 TPA_asm: Pseudoalteromonas prydzensis isolate HyVt-346 HyVt-346_k145_795663, whole genome shotgun sequence (114455 bp)
Overview 1 RT 1: 108042-112567 bp Neighborhood of RT #1 [108042, 112569] DUF998 RVT-GII GIIM integrase_gron Feature: gene Location: 108042-108647 bp Feature: domain Description: DUF998 Location: 108114-108588 bp Feature: domain Description: DUF998 Location: 1 081 1 4-1 08588 bp Feature: gene Location: 108746-109192 bp Feature: gene Location: 109995-111350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110289-110913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0289-1 1 091 3 bp Feature: domain Description: GIIM Note: maturase Location: 110952-111171 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 0952-1 1 1 1 71 bp Feature: gene Location: 111419-111868 bp Feature: gene Location: 112093-112569 bp Feature: domain Description: integrase_gron Location: 112132-112567 bp Feature: domain Description: integrase_gron Location: 1 1 21 32-1 1 2567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF998 (pfam06197), RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249)

Seq: DRGM01000211.1 TPA_asm: Pseudoalteromonas prydzensis isolate HyVt-346 HyVt-346_k145_913612, whole genome shotgun sequence (96385 bp)
Overview 1 RT 1: 92865-94916 bp Neighborhood of RT #1 [92865, 95734] RpoE RVT-UG15 Feature: gene Location: 92865-93410 bp Feature: domain Description: RpoE Location: 92937-93396 bp Feature: domain Description: RpoE Location: 92 937-93396 bp Feature: gene Location: 93403-94029 bp Feature: gene Location: 94082-95734 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 94511-94916 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 94511-94916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), RVT-UG15