myRT

myRT report for GCA_011050115.1_ASM1105011v1

Download annotations/find similar RTs

Seq: DRGJ01000104.1 TPA_asm: Candidatus Scalindua sp. isolate HyVt-343 HyVt-343_k145_284451, whole genome shotgun sequence (4018 bp)
Overview 1 RT 1: 2-2492 bp Neighborhood of RT #1 [2, 2560] HATPase_CckA-like REC RVT-GII sorbitol_DH MopB_CT_4 MopB_CT_4 Feature: gene Location: 2-160 bp Feature: domain Description: HATPase_CckA-like Location: 59-158 bp Feature: domain Description: HATPase_CckA-like Location: 59-1 58 bp Feature: gene Location: 193-414 bp Feature: domain Description: REC Location: 196-394 bp Feature: domain Description: REC Location: 1 96-394 bp Feature: gene Location: 513-785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-708 bp Feature: gene Location: 909-1145 bp Feature: domain Description: sorbitol_DH Location: 915-1134 bp Feature: domain Description: sorbitol_DH Location: 91 5-1 1 34 bp Feature: gene Location: 1670-2560 bp Feature: domain Description: MopB_CT_4 Location: 2210-2267 bp Feature: domain Description: MopB_CT_4 Location: 221 0-2267 bp Feature: domain Description: MopB_CT_4 Location: 2435-2492 bp Feature: domain Description: MopB_CT_4 Location: 2435-2492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HATPase_CckA-like (cd16919), REC (smart00448), RVT-GII, sorbitol_DH (cd05285), MopB_CT_4 (cd02785)

Seq: DRGJ01000336.1 TPA_asm: Candidatus Scalindua sp. isolate HyVt-343 HyVt-343_k145_833405, whole genome shotgun sequence (21622 bp)
Overview 1 RT 1: 11291-14831 bp Neighborhood of RT #1 [11291, 14860] RE_TdeIII GIY-YIG_UvrC_Cho RVT-UG12 HicB HicA_toxin Feature: gene Location: 11291-11527 bp Feature: domain Description: RE_TdeIII Location: 11312-11513 bp Feature: domain Description: RE_TdeIII Location: 11312 -11513 bp Feature: gene Location: 11869-12177 bp Feature: domain Description: GIY-YIG_UvrC_Cho Location: 11929-12172 bp Feature: domain Description: GIY-YIG_UvrC_Cho Location: 1192 9-12 172 bp Feature: gene Location: 12390-13958 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 12723-13170 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 12 72 3-13170 bp Feature: gene Location: 14451-14645 bp Feature: domain Description: HicB Location: 14454-14604 bp Feature: domain Description: HicB Location: 14454-14604 bp Feature: gene Location: 14648-14860 bp Feature: domain Description: HicA_toxin Location: 14681-14831 bp Feature: domain Description: HicA_toxin Location: 14681-14831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RE_TdeIII (pfam09520), GIY-YIG_UvrC_Cho (cd10434), RVT-UG12, HicB (pfam05534), HicA_toxin (pfam07927)