myRT

myRT report for GCA_011050215.1_ASM1105021v1

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Seq: DRGD01000279.1 TPA_asm: Pseudoalteromonas sp. isolate HyVt-338 HyVt-338_k145_371084, whole genome shotgun sequence (9040 bp)
Overview 1 RT 1: 946-5590 bp Neighborhood of RT #1 [946, 5601] MarR organ_hyd_perox RVT-GII GIIM PRK10141 PRK08955 Feature: gene Location: 946-1422 bp Feature: domain Description: MarR Location: 1045-1339 bp Feature: domain Description: MarR Location: 1 045-1 339 bp Feature: gene Location: 1510-1938 bp Feature: domain Description: organ_hyd_perox Location: 1537-1933 bp Feature: domain Description: organ_hyd_perox Location: 1 537-1 933 bp Feature: gene Location: 2730-4004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943-3564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943-3564 bp Feature: domain Description: GIIM Note: maturase Location: 3609-3828 bp Feature: domain Description: GIIM Note: maturase Location: 3609-3828 bp Feature: gene Location: 4202-4558 bp Feature: domain Description: PRK10141 Location: 4205-4478 bp Feature: domain Description: PRK1 01 41 Location: 4205-4478 bp Feature: gene Location: 4591-5601 bp Feature: domain Description: PRK08955 Location: 4594-5590 bp Feature: domain Description: PRK08955 Location: 4594-5590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), organ_hyd_perox (TIGR03561), RVT-GII, GIIM (pfam08388), PRK10141 (DNA-binding transcriptional repressor ArsR; Provisional), PRK08955 (glyceraldehyde-3-phosphate dehydrogenase; Validated)

Seq: DRGD01000387.1 TPA_asm: Pseudoalteromonas sp. isolate HyVt-338 HyVt-338_k145_528895, whole genome shotgun sequence (6395 bp)
Overview 1 RT 1: 2674-6394 bp Neighborhood of RT #1 [2674, 6394] RVT-Retrons Feature: gene Location: 2674-3273 bp Feature: gene Location: 3395-3820 bp Feature: gene Location: 4086-5018 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4185-4776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4185-4776 bp Feature: gene Location: 5015-5980 bp Feature: gene Location: 6257-6394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: DRGD01000483.1 TPA_asm: Pseudoalteromonas sp. isolate HyVt-338 HyVt-338_k145_707488, whole genome shotgun sequence (3234 bp)
Overview 1 RT 1: 1-1401 bp Neighborhood of RT #1 [1, 1401] RVT-UG17 Feature: gene Location: 1-930 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 226-808 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 226-808 bp Feature: gene Location: 977-1228 bp Feature: gene Location: 1249-1401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: DRGD01000564.1 TPA_asm: Pseudoalteromonas sp. isolate HyVt-338 HyVt-338_k145_85533, whole genome shotgun sequence (7864 bp)
Overview 1 RT 1: 2398-7178 bp Neighborhood of RT #1 [2398, 7189] PepP DsbA_FrnE RVT-UG15 PRK15441 YuxK Feature: gene Location: 2398-3618 bp Feature: domain Description: PepP Location: 2488-3589 bp Feature: domain Description: PepP Location: 24 88-3589 bp Feature: gene Location: 3742-4401 bp Feature: domain Description: DsbA_FrnE Location: 3760-4363 bp Feature: domain Description: DsbA_FrnE Location: 3760-4 363 bp Feature: gene Location: 4623-6215 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5034-5436 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5034 -54 36 bp Feature: gene Location: 6387-6665 bp Feature: domain Description: PRK15441 Location: 6390-6660 bp Feature: domain Description: PRK154 4 1 Location: 6390-6660 bp Feature: gene Location: 6767-7189 bp Feature: domain Description: YuxK Location: 6794-7178 bp Feature: domain Description: YuxK Location: 6794 -7178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepP (COG0006), DsbA_FrnE (cd03024), RVT-UG15, PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional), YuxK (COG3011)