myRT

myRT report for GCA_011050345.1_ASM1105034v1

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Seq: DRFY01000222.1 TPA_asm: Methylophaga sp. isolate HyVt-333 HyVt-333_k145_200206, whole genome shotgun sequence (12929 bp)
Overview 1 RT 1: 1-2777 bp Neighborhood of RT #1 [1, 2777] RVT-UG5 Feature: gene Location: 1-1707 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 529-1069 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 529-1 069 bp Feature: gene Location: 1962-2462 bp Feature: gene Location: 2553-2777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: DRFY01000407.1 TPA_asm: Methylophaga sp. isolate HyVt-333 HyVt-333_k145_58042, whole genome shotgun sequence (3457 bp)
Overview 1 RT 1: 288-3455 bp Neighborhood of RT #1 [288, 3455] COG3436 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 288-725 bp Feature: domain Description: COG3436 Location: 303-684 bp Feature: domain Description: COG3436 Location: 303-684 bp Feature: gene Location: 795-1046 bp Feature: gene Location: 1357-3042 bp Feature: domain Description: RVT_N Location: 1414-1657 bp Feature: domain Description: RVT_N Location: 1414-1657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702-2359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702 -2 359 bp Feature: domain Description: GIIM Note: maturase Location: 2419-2644 bp Feature: domain Description: GIIM Note: maturase Location: 2 419-2 644 bp Feature: domain Description: HNHc Note: nucleases Location: 2845-2992 bp Feature: domain Description: HNHc Note: nucleases Location: 2 845-2 992 bp Feature: gene Location: 3219-3455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: DRFY01000478.1 TPA_asm: Methylophaga sp. isolate HyVt-333 HyVt-333_k145_94708, whole genome shotgun sequence (7370 bp)
Overview 1 RT 1: 3210-6783 bp Neighborhood of RT #1 [3210, 6783] Rep_3 RVT-GII Feature: gene Location: 3210-4334 bp Feature: domain Description: Rep_3 Location: 3294-4002 bp Feature: domain Description: Rep_3 Location: 3 294-4002 bp Feature: gene Location: 4469-4603 bp Feature: gene Location: 5439-5648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5454-5592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5454-5592 bp Feature: gene Location: 6589-6783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), RVT-GII