myRT

myRT report for GCA_011050535.1_ASM1105053v1

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Seq: DRFM01000058.1 TPA_asm: Marinobacter sp. isolate HyVt-322 HyVt-322_k145_118143, whole genome shotgun sequence (9340 bp)
Overview 1 RT 1: 873-3838 bp Neighborhood of RT #1 [873, 3861] PHA02517 RVT-GII GIIM PHA02517 HTH_XRE Feature: gene Location: 873-1025 bp Feature: domain Description: PHA02517 Location: 888-960 bp Feature: domain Description: PHA0251 7 Location: 888-960 bp Feature: gene Location: 1474-1623 bp Feature: gene Location: 1620-3143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1893-2625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 893-2625 bp Feature: domain Description: GIIM Note: maturase Location: 2745-2925 bp Feature: domain Description: GIIM Note: maturase Location: 2745-2925 bp Feature: gene Location: 3272-3607 bp Feature: domain Description: PHA02517 Location: 3275-3596 bp Feature: domain Description: PHA0251 7 Location: 3275-3596 bp Feature: gene Location: 3730-3861 bp Feature: domain Description: HTH_XRE Location: 3757-3838 bp Feature: domain Description: HTH_XRE Location: 3757-3838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_XRE (smart00530)

Seq: DRFM01000238.1 TPA_asm: Marinobacter sp. isolate HyVt-322 HyVt-322_k145_174179, whole genome shotgun sequence (2683 bp)
Overview 1 RT 1: 3-2481 bp Neighborhood of RT #1 [3, 2681] HTH_Tnp_1 HTH_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 3-329 bp Feature: domain Description: HTH_Tnp_1 Location: 24-177 bp Feature: domain Description: HTH_Tnp_1 Location: 2 4-177 bp Feature: domain Description: HTH_Tnp_1 Location: 195-318 bp Feature: domain Description: HTH_Tnp_1 Location: 195-318 bp Feature: gene Location: 435-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 639-1296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 639-12 96 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1596 bp Feature: gene Location: 1702-2070 bp Feature: gene Location: 2202-2681 bp Feature: domain Description: DDE_Tnp_1 Location: 2208-2481 bp Feature: domain Description: DDE_Tnp_1 Location: 2 2 08-2 481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)